mRNA_H-paniculata_contig10135.113.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10135.113.1 vs. uniprot
Match: D7FQJ3_ECTSI (Gamma hydroxybutyrate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQJ3_ECTSI) HSP 1 Score: 120 bits (301), Expect = 3.380e-31 Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 1 Query: 1 VNMVMSTMMTSLAEGMSLSDRLGLDNDSLIEILGQGAMANPMFALKAPLMHKKNFAPNFPLKHAQKDMRFALGLGDQVS 237 VNM+MSTM+ S+AEGM L D LGL +DSLIEILGQGAMA+PM ALK PLM KK+++ NFPLKHAQKDMRFALGLGD+ + Sbjct: 226 VNMIMSTMLVSVAEGMCLGDSLGLSSDSLIEILGQGAMASPMVALKGPLMAKKDYSSNFPLKHAQKDMRFALGLGDKAA 304
BLAST of mRNA_H-paniculata_contig10135.113.1 vs. uniprot
Match: A0A835YH89_9STRA (2-hydroxy-3-oxopropionate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH89_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.590e-29 Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 1 Query: 4 NMVMSTMMTSLAEGMSLSDRLGLDNDSLIEILGQGAMANPMFALKAPLMHKKNFAPNFPLKHAQKDMRFALGLGDQVS 237 NM+M TM+ SLAEGMSLS+ LGL ++ LIEILG GAMANPMF LK PLM ++APNFPLKHAQKDMRFALGLG+ + Sbjct: 184 NMIMGTMLASLAEGMSLSESLGLKSEDLIEILGLGAMANPMFKLKGPLMESGSYAPNFPLKHAQKDMRFALGLGEATA 261
BLAST of mRNA_H-paniculata_contig10135.113.1 vs. uniprot
Match: A0A835YEH8_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YEH8_9CHLO) HSP 1 Score: 103 bits (258), Expect = 2.400e-25 Identity = 50/79 (63.29%), Postives = 63/79 (79.75%), Query Frame = 1 Query: 1 VNMVMSTMMTSLAEGMSLSDRLGLDNDSLIEILGQGAMANPMFALKAPLMHKKNFAPNFPLKHAQKDMRFALGLGDQVS 237 VNMVM +MMTS AEG++L+D++GL LI+++G GA+A PMFALK P M K+ +AP FPLKH QKDMR AL LGDQV+ Sbjct: 163 VNMVMGSMMTSFAEGLALADKVGLRQSDLIDVIGLGAIAAPMFALKGPAMAKRAYAPAFPLKHQQKDMRLALALGDQVA 241
BLAST of mRNA_H-paniculata_contig10135.113.1 vs. uniprot
Match: D8U8A6_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8A6_VOLCA) HSP 1 Score: 100 bits (248), Expect = 8.690e-24 Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 1 VNMVMSTMMTSLAEGMSLSDRLGLDNDSLIEILGQGAMANPMFALKAPLMHKKNFAPNFPLKHAQKDMRFALGLGDQVS 237 VNMVM +MM + EGM+L+D+ GL+ +L+EILG GAMANPMFALK P + +N+ P FPLKH QKD+R AL LGD ++ Sbjct: 181 VNMVMGSMMGAFCEGMALADKAGLEQSALLEILGLGAMANPMFALKGPAIMSRNYPPAFPLKHQQKDLRLALALGDALN 259
BLAST of mRNA_H-paniculata_contig10135.113.1 vs. uniprot
Match: A0A7R9VUI8_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VUI8_9CHLO) HSP 1 Score: 97.1 bits (240), Expect = 1.270e-23 Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 1 Query: 1 VNMVMSTMMTSLAEGMSLSDRLGLDNDSLIEILGQGAMANPMFALKAPLMHKKNFAPNFPLKHAQKDMRFALGLGDQVS 237 VNMVM +MM + AEG+SL++R GL+ L+E++G GA+A PM+ALK P M +AP FPLKH QKDMR AL LGDQV+ Sbjct: 64 VNMVMGSMMVAFAEGLSLAERSGLNQKDLVEVVGLGAIAAPMYALKGPTMIDGKYAPAFPLKHQQKDMRLALALGDQVA 142
BLAST of mRNA_H-paniculata_contig10135.113.1 vs. uniprot
Match: UPI0010AD2A3D (NAD(P)-dependent oxidoreductase n=1 Tax=Desulfosediminicola flagellatus TaxID=2569541 RepID=UPI0010AD2A3D) HSP 1 Score: 99.4 bits (246), Expect = 1.440e-23 Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = 1 Query: 1 VNMVMSTMMTSLAEGMSLSDRLGLDNDSLIEILGQGAMANPMFALKAPLMHKKNFAPNFPLKHAQKDMRFALGLGDQVS 237 +NMVM TMMT+ AEG++L D++GL + +I++L QGA+ NPMF LK PLM FAP FPLKH QKDMR AL LGD+ S Sbjct: 174 INMVMGTMMTAFAEGLALGDKIGLKMEDVIDVLAQGAINNPMFQLKGPLMADGKFAPAFPLKHMQKDMRLALQLGDKHS 252
BLAST of mRNA_H-paniculata_contig10135.113.1 vs. uniprot
Match: A0A835WD89_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WD89_9CHLO) HSP 1 Score: 100 bits (250), Expect = 1.580e-23 Identity = 48/78 (61.54%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 1 VNMVMSTMMTSLAEGMSLSDRLGLDNDSLIEILGQGAMANPMFALKAPLMHKKNFAPNFPLKHAQKDMRFALGLGDQV 234 VNMVM +MMTS AEG++L+D++GL +IE++G GA+A PMFALK P M +++AP FPLKH QKDMR AL LGD+V Sbjct: 261 VNMVMGSMMTSFAEGLALADKVGLRQQDVIEVVGLGAIAAPMFALKGPAMAARSYAPAFPLKHQQKDMRLALALGDEV 338
BLAST of mRNA_H-paniculata_contig10135.113.1 vs. uniprot
Match: A0A150GKR8_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GKR8_GONPE) HSP 1 Score: 99.4 bits (246), Expect = 1.740e-23 Identity = 47/78 (60.26%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 1 VNMVMSTMMTSLAEGMSLSDRLGLDNDSLIEILGQGAMANPMFALKAPLMHKKNFAPNFPLKHAQKDMRFALGLGDQV 234 VNMVM MM + EGM+L+D+ GL+ +L+EILG GAMANPMFALK P + +N+ P FPLKH QKD+R AL LGD + Sbjct: 181 VNMVMGAMMGAFCEGMALADKAGLEQSALLEILGLGAMANPMFALKGPAIMARNYPPAFPLKHQQKDLRLALALGDSL 258
BLAST of mRNA_H-paniculata_contig10135.113.1 vs. uniprot
Match: A0A2J8AB59_9CHLO (Putative oxidoreductase GLYR1 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AB59_9CHLO) HSP 1 Score: 99.4 bits (246), Expect = 5.230e-23 Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 1 VNMVMSTMMTSLAEGMSLSDRLGLDNDSLIEILGQGAMANPMFALKAPLMHKKNFAPNFPLKHAQKDMRFALGLGDQVS 237 VNMVM MM S AEG++L+D++GL +I+++G GA+A PMFALK P M K+ +AP FPLKH QKDMR AL LGD+V+ Sbjct: 256 VNMVMGAMMASFAEGLALADKVGLRQQDVIDVIGLGAIAAPMFALKGPAMAKRAYAPAFPLKHQQKDMRLALALGDEVA 334
BLAST of mRNA_H-paniculata_contig10135.113.1 vs. uniprot
Match: A0A7S2V669_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V669_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 5.260e-23 Identity = 49/78 (62.82%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 1 VNMVMSTMMTSLAEGMSLSDRLGLDNDSLIEILGQGAMANPMFALKAPLMHKKNFAPNFPLKHAQKDMRFALGLGDQV 234 VNM+M TM+ SLAEGM+L + GL + L++IL GAMANPMF LK P M K + NFPLKHAQKDMRFAL LGD++ Sbjct: 210 VNMIMGTMLASLAEGMNLVKKAGLKEEDLLDILDLGAMANPMFKLKGPTMIKGAYPANFPLKHAQKDMRFALKLGDEL 287 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10135.113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10135.113.1 >prot_H-paniculata_contig10135.113.1 ID=prot_H-paniculata_contig10135.113.1|Name=mRNA_H-paniculata_contig10135.113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp MVMSTMMTSLAEGMSLSDRLGLDNDSLIEILGQGAMANPMFALKAPLMHKback to top mRNA from alignment at H-paniculata_contig10135:4479..5307+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10135.113.1 ID=mRNA_H-paniculata_contig10135.113.1|Name=mRNA_H-paniculata_contig10135.113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=829bp|location=Sequence derived from alignment at H-paniculata_contig10135:4479..5307+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10135:4479..5307+ >mRNA_H-paniculata_contig10135.113.1 ID=mRNA_H-paniculata_contig10135.113.1|Name=mRNA_H-paniculata_contig10135.113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at H-paniculata_contig10135:4479..5307+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |