mRNA_H-paniculata_contig1012.103.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1012.103.1 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE) HSP 1 Score: 369 bits (946), Expect = 7.180e-115 Identity = 223/359 (62.12%), Postives = 252/359 (70.19%), Query Frame = 3
Query: 1110 THCRAHEISYLRAEAGRRAETAL-AAFTTFDLGRDVGGRLLDIRKRVR-------RKRA---GADDDDNSRAEEGEYEGSR---LALLLDRTVQNVVDVVARDGWEHVATTSGVVVYRQYIALGSDGVP-LPTTPNYSRSSASEDRETPAGGGRGDRAGIVDGAEGGMVAKATAAAAEGVGGACQAPQFACVKATAILDVPPEVVYRLFADNSRVGEYNEHCREVLDLETLSLDCKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSNRYVRSEILLAGNFMRAVPGDSSRTEFMMITHVNPGGAAETRAGAMLVNSLCTSSPVNFIRRLEVAAQKLMSELREE 2141
TH A ++S L E RRAE L AA + ++G + G +R+R R RKR G+ D +EGE E + L LL D+ VQNVVDVVARDGWE V GVVV+RQY+ALG DG P P P +A + G R V+G+ A A E G + PQFACVKA+AIL VPPEVVY LFADNSRVGEYNEHCREV DLE LS D KITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVS+PVEHPAAPR++RYVRSEILLAGNFMR VPGD SRTEF+M+THVNPGGAAETRAGAMLVNSLCTSSPV FIRRLEVAA+KLM EL+++
Sbjct: 189 THLTA-QLSELTGEGFRRAERLLSAANASGNVGIRIAGCAELLRRRGRELFLLGLRKRQNPDGSGGDKLGMGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAPAAPAAHAQAAGVPKAEAYSASVGGR---VEGS-----ADDPAPVGED-SGKFRPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQ 537
BLAST of mRNA_H-paniculata_contig1012.103.1 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI) HSP 1 Score: 362 bits (929), Expect = 6.170e-113 Identity = 216/357 (60.50%), Postives = 248/357 (69.47%), Query Frame = 3
Query: 1128 EISYLRAEAGRRAETAL-AAFTTFDLGRDVGGRLLDIRKRVR-------RKRAGAD----DDDNSRAEEGEYEGSR---LALLLDRTVQNVVDVVARDGWEHVATTSGVVVYRQYIALGSDGVPLPTTPNYSRSSASEDRETPAG----GGRGDRAGIVDGAEGGMVAKATAAAAEGVGGACQAPQFACVKATAILDVPPEVVYRLFADNSRVGEYNEHCREVLDLETLSLDCKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSNRYVRSEILLAGNFMRAVPGDSSRTEFMMITHVNPGGAAETRAGAMLVNSLCTSSPVNFIRRLEVAAQKLMSELREE 2141
++S L E RRAE L AA + ++G + G +R+R R RK+ D + + +EGE E + L LL D+ VQNVVDVVARDGWE V GVVV+RQY+ALG DG P A+ + A GGR V+G+ V + G + PQFACVKA+AIL VPPEVVY LFADNSRVGEYNEHCREV DLE LS D KITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVS+PVEHPAAPR++RYVRSEILLAGNFMR VPGD SRTEF+M+THVNPGGAAETRAGAMLVNSLCTSSPV FIRRLEVAA+KLM EL+++
Sbjct: 227 QLSELTGEGFRRAERLLSAAKASGNVGIRIAGCAELLRRRGRELFLLGLRKKQNPDGLGGEGKLGKGKEGEAERRKMRELQLLTDKIVQNVVDVVARDGWEVVVEREGVVVHRQYLALGPDGTPEAXXXXXXXXQAAGVPKAEASSAFVGGR------VEGSADDSVPVGDDS------GKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAAKKLMLELQQQ 571
BLAST of mRNA_H-paniculata_contig1012.103.1 vs. uniprot
Match: A0A7S2V5A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A8_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.830e-57 Identity = 104/191 (54.45%), Postives = 137/191 (71.73%), Query Frame = 3
Query: 1557 EGGMVAKATAAAAEGVGGACQAPQFACVKATAILDVPPEVVYRLFADNSRVGEYNEHCREVLDLETLSLDCKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSNRYVRSEILLAGNFMRAVPGDSSRTEFMMITHVNPGGAAETRAGAMLVNSLCTSSPVNFIRRLEVAAQKLMSE 2129
+GG A+A +AA G GGA +FA +KA +D P E V++LF DNSRVGEYN+HC E+ DLE + K+TW+ASG+ GPFKARDFCTLVHF TL+DGT A VS P HP AP ++RYVRSE+++AG+FMR P D ++T F IT VNPGG A + A +VNSL T P+ F++++E+AAQ+ M +
Sbjct: 197 QGGARARAVSAAHGGEGGAVN-DKFAVIKAVGTIDAPIEEVHKLFVDNSRVGEYNDHCHEIKDLEWVGPRTKVTWSASGKYGPFKARDFCTLVHFATLADGTQAIVSVPFNHPQAPATSRYVRSEVIMAGHFMRRDPKDPNKTAFTTITQVNPGGIAGSAGAAKIVNSLSTQGPITFVKKVELAAQQTMKQ 386
BLAST of mRNA_H-paniculata_contig1012.103.1 vs. uniprot
Match: I2CRQ3_NANGC (Lipid transfer protein 5-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRQ3_NANGC) HSP 1 Score: 197 bits (501), Expect = 7.450e-56 Identity = 90/153 (58.82%), Postives = 119/153 (77.78%), Query Frame = 3
Query: 1599 GVGGACQAPQFACVKATAILDVPPEVVYRLFADNSRVGEYNEHCREVLDLETLSLDCKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSNRYVRSEILLAGNFMRAVPGDSSRTEFMMITHVNPGGAAETRAGAMLVN 2057
GVGG +FACVKA ++D P + V+ LF D++RVGEYNEHCRE+ D++TLS + K+TW+ASGR GPFKARDFCT+VH+R L DG L V+R EH APRS++YVRSEILLAGN MR P D ++T + +TH+NPGG+ +++AGA++VN
Sbjct: 7 GVGGGRDGGRFACVKAVGVVDAPVDRVFDLFLDSARVGEYNEHCREIQDIDTLSANTKVTWSASGRYGPFKARDFCTVVHYRRLEDGRLVVVNRAAEHVRAPRSDKYVRSEILLAGNIMRPHPSDPNKTLLVTLTHINPGGSIDSKAGALMVN 159
BLAST of mRNA_H-paniculata_contig1012.103.1 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI) HSP 1 Score: 200 bits (508), Expect = 7.240e-53 Identity = 117/276 (42.39%), Postives = 153/276 (55.43%), Query Frame = 3
Query: 1293 EEGEYEGSRLALLL---DRTVQNVVDVVARDGWEHVATTSGVVVYRQYIALGSDGVPLPTTPNYSRSSASEDRETPAGGGRGDRAGIVDGAEGGMVAKATAAAAEGVGGACQAPQFACVKATAILDVPPEVVYRLFADNSRVGEYNEHCREVLDLETLSLDCKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSNRYVRSEILLAGNFMRAVPGDSSRTEFMMITHVNPGGAAETRAGAMLVNSLCTSSPVNFIRRLEVAA 2111
EEGE + + L D +V+ V+ V+ DGWE V SGVVV R+++ GIVD EG A +FACVKA LD +Y+LF DN RV EYN++C+EV DLE LS D K++WA + R PFKARDF T VH+RTL DGT+ ++RPVEHPAA R +YVR+EIL+A N MR D S+T+F+ +TH+NPGG A++R GA +VN LC +PVN + LE +A
Sbjct: 235 EEGEVISAEMLALQAENDASVEAVLAVIESDGWERVTEKSGVVVVRKFVXXXXXXXXXXXXXXR---------------------GIVD---------------EGA-----AAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 469
BLAST of mRNA_H-paniculata_contig1012.103.1 vs. uniprot
Match: A0A7S2RES9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES9_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.450e-52 Identity = 92/165 (55.76%), Postives = 118/165 (71.52%), Query Frame = 3
Query: 1620 APQFACVKATAILDVPPEVVYRLFADNSRVGEYNEHCREVLDLETLSLDCKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSNRYVRSEILLAGNFMRAVPGDSSRTEFMMITHVNPGGAAETRAGAMLVNSLCTSSPVNFIRRLEVAAQ 2114
A +F+CVKATAIL+ P VY+LF DNS+V EYNEHC+++ D+E +S D K+ W+ + GPFK RDF T+VH+R DGTL ++RP HP P ++ R+E+LLAGN MR V GD S+TEF MITHVNPGG GA +VN +C+ PV+FIRRLE AAQ
Sbjct: 133 AAKFSCVKATAILNASPHDVYKLFLDNSQVHEYNEHCQKLEDVERVSKDTKVAWSVTAPFGPFKPRDFVTMVHYRREPDGTLMVLNRPCNHPDRPPVPQFQRAELLLAGNVMRPVQGDKSKTEFTMITHVNPGGVVNNALGAAIVNRICSQGPVDFIRRLERAAQ 297
BLAST of mRNA_H-paniculata_contig1012.103.1 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE) HSP 1 Score: 191 bits (484), Expect = 3.820e-50 Identity = 92/164 (56.10%), Postives = 118/164 (71.95%), Query Frame = 3
Query: 1620 APQFACVKATAILDVPPEVVYRLFADNSRVGEYNEHCREVLDLETLSLDCKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSNRYVRSEILLAGNFMRAVPGDSSRTEFMMITHVNPGGAAETRAGAMLVNSLCTSSPVNFIRRLEVAA 2111
A +FACVKA LD +Y+LF DN RV EYN++C+EV DLE LS D K++WA + R PFKARDF T VH+RTL DGT+ V+RPVEHPAA R +YVR+EIL+A N MR D S+T+F+ +TH+NPGG A++R GA +VN LC +PVN + LE +A
Sbjct: 241 AAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPFKARDFVTAVHYRTLEDGTMMVVNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALERSA 404
BLAST of mRNA_H-paniculata_contig1012.103.1 vs. uniprot
Match: A0A7S4NFJ2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NFJ2_GUITH) HSP 1 Score: 179 bits (453), Expect = 1.780e-47 Identity = 87/163 (53.37%), Postives = 111/163 (68.10%), Query Frame = 3
Query: 1626 QFACVKATAILDVPPEVVYRLFADNSRVGEYNEHCREVLDLETLSLDCKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSNRYVRSEILLAGNFMRAVPG-----DSSRTEFMMITHVNPGGAAETRAGAMLVNSLCTSSPVNFIRRL 2099
+F CV ++ ILD PPE VY F DNSRV EYNE C++V DLE L + KITW+ASGR+GPFK RDF T VH+RT SDG+L +R +HP AP + R++R EI++ GN +R D SRT ++THVNPGG AETR G M++NS S P+ FI+ L
Sbjct: 58 KFFCVMSSGILDAPPEQVYTYFVDNSRVHEYNEFCKQVKDLEYLDANTKITWSASGRVGPFKERDFVTRVHYRTASDGSLIIANRAEKHPKAPETERFLRMEIMIGGNVLRPAREADGSLDHSRTNITVLTHVNPGGIAETRLGTMILNSAAASGPIKFIQGL 220
BLAST of mRNA_H-paniculata_contig1012.103.1 vs. uniprot
Match: A0A7S0VPD5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VPD5_9CRYP) HSP 1 Score: 174 bits (441), Expect = 3.660e-47 Identity = 79/138 (57.25%), Postives = 104/138 (75.36%), Query Frame = 3
Query: 1686 LFADNSRVGEYNEHCREVLDLETLSLDCKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHPAAPRSNRYVRSEILLAGNFMRAVPGDSSRTEFMMITHVNPGGAAETRAGAMLVNSLCTSSPVNFIRRL 2099
LF DN+RV EYNE C+++ DLE + K+TW+AS R+GPFK RDF T VH+RTL+D TL V+R +HPAAPR++RY+R EI+L GN MRAVPGD +T F M+THVNPGG A TR G M++NS + P++F++ L
Sbjct: 2 LFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPFKERDFVTRVHYRTLADQTLLVVNRAEDHPAAPRTDRYLRMEIVLGGNVMRAVPGDPQKTSFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGL 139
BLAST of mRNA_H-paniculata_contig1012.103.1 vs. uniprot
Match: A0A7S0QTI7_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTI7_9CRYP) HSP 1 Score: 177 bits (448), Expect = 5.340e-47 Identity = 84/161 (52.17%), Postives = 113/161 (70.19%), Query Frame = 3
Query: 1620 APQFACVKATAILDVPPEVVYRLFADNSRVGEYNEHCREVLDLETLSLDCKITWAASGRMGPFKARDFCTLVHFRTLSDGTLAQVSRPVEHP-AAPRSNRYVRSEILLAGNFMRAVPGDSSRTEFMMITHVNPGGAAETRAGAMLVNSLCTSSPVNFIRRL 2099
A +F C+KA +LD PP V+ LF DN+R GEYNE CRE+ D+E + K+TW+ASGR+GPFK RDF T VH+R+L DGTL V+R + P A S+RY+R E+ L G+ +R +PG+ +RT + + HVNPGG AETR GAML+N+ S PV ++RL
Sbjct: 38 AAKFDCIKAAGVLDAPPAEVFELFIDNARAGEYNEFCRELRDVEFIDNATKVTWSASGRVGPFKERDFVTRVHYRSLPDGTLLVVNRAEDAPLTAASSDRYLRMEMYLGGSVLRPLPGNPNRTIYTTLAHVNPGGVAETRIGAMLMNAAAASGPVKLVQRL 198 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1012.103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1012.103.1 >prot_H-paniculata_contig1012.103.1 ID=prot_H-paniculata_contig1012.103.1|Name=mRNA_H-paniculata_contig1012.103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=686bp MHETRLAILAAMLFFLRSYPLETCSLITPTAPQEQQPPQQQYGRNQRPVTback to top mRNA from alignment at H-paniculata_contig1012:20197..27202+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1012.103.1 ID=mRNA_H-paniculata_contig1012.103.1|Name=mRNA_H-paniculata_contig1012.103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7006bp|location=Sequence derived from alignment at H-paniculata_contig1012:20197..27202+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1012:20197..27202+ >mRNA_H-paniculata_contig1012.103.1 ID=mRNA_H-paniculata_contig1012.103.1|Name=mRNA_H-paniculata_contig1012.103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4116bp|location=Sequence derived from alignment at H-paniculata_contig1012:20197..27202+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |