mRNA_H-paniculata_contig10109.96.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10109.96.1
Unique NamemRNA_H-paniculata_contig10109.96.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10109.96.1 vs. uniprot
Match: D7FJS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS1_ECTSI)

HSP 1 Score: 499 bits (1286), Expect = 1.840e-176
Identity = 245/290 (84.48%), Postives = 266/290 (91.72%), Query Frame = 1
Query:    1 FAVPILIVTILPPVNLKKKYGARWALVTGGGSGIGKALVEELALQGLNVVIVSMDDNFLADTFASVKTQFPDQEFRKVGATFSPEVKYMEMIKEATKDINVQCVFNNAGFIVTGFFEASPEGKQMANLECNATASAKISHHFIGRMIREKQKGCIVFTSSVVAYIPGPFSAMYGATKAFMSNLAASLSVEVRAKGIDVLAVHPSPVNSQFYNNLDHKIEMMDKAKKTAVAPNVLPREIFKSIGRVVWRDIGGMAVGVRIGTKMLSYNFLATAFAMAAPYLPDYKKNDVGR 870
            + VP+L+V +LPP NLKKKYGA+WALVTGGGSGIGKALVEELALQGLNVVIVSMDD FLADTFA V ++FP QEFRKVGATFSP V YM+ IK  T DINVQCVFNNAGFIVTGF+E+S EGKQMANLECNATA+AKISHHF+GRMIREKQKGC+VFTSSV AY P PFSAMYGATKAF+SNLAASLSVEVR KGIDVL+VHPSPV SQFY+NLDH IE+MDKAK++AV PNVLPREI KSIGRVVWRDIGGMAVGVR+GTKMLSYNFLATAF+M  PYLPDYKKNDVGR
Sbjct:   23 YFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 312          
BLAST of mRNA_H-paniculata_contig10109.96.1 vs. uniprot
Match: A0A6V1NV24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NV24_HETAK)

HSP 1 Score: 363 bits (931), Expect = 1.830e-122
Identity = 178/290 (61.38%), Postives = 227/290 (78.28%), Query Frame = 1
Query:    1 FAVPILIVTILPPVNLKKKYGARWALVTGGGSGIGKALVEELALQGLNVVIVSMDDNFLADTFASVKTQFPDQEFRKVGATFSPEVKYMEMIKEATKDINVQCVFNNAGFIVTGFFEASPEGKQMANLECNATASAKISHHFIGRMIREKQKGCIVFTSSVVAYIPGPFSAMYGATKAFMSNLAASLSVEVRAKGIDVLAVHPSPVNSQFYNNLDHKIEMMDKAKKTAVAPNVLPREIFKSIGRVVWRDIGGMAVGVRIGTKMLSYNFLATAFAMAAPYLPDYKKNDVGR 870
            + V +++V +  PVNLKKKYGA WALVTGG SGIGK+L   LA QGLNVV+V+++D  L DT A +K  FP+++F  VGA  SP  KYME I +ATKDI+VQCVFNNAG+IVTGFFE  P  +Q+AN+ECNATA+  I+HHF+ R++ E ++GCIVFTSSVVAY+P PFS  YGATKAF+S+ A+SL++E R KGIDV +VHPSPV S+FY+N  HK+EMMD AKK A +P+  P +I KS+GR V RD+GG AVG+R+ T ++S NFLA+AFA AA +LPD+KK  V R
Sbjct:   24 YFVRVILVALSRPVNLKKKYGAEWALVTGGSSGIGKSLCRRLAEQGLNVVVVALEDQLLKDTVAELKAAFPERQFIMVGANLSPGQKYMEKIAKATKDISVQCVFNNAGYIVTGFFEQVPVERQLANVECNATAAVAITHHFLSRLVSEGKRGCIVFTSSVVAYMPAPFSVTYGATKAFLSSFASSLAIENREKGIDVCSVHPSPVASRFYDNT-HKMEMMDFAKKGAASPDAYPDQILKSVGRCVLRDVGGFAVGMRVVTCLMSENFLASAFAAAARFLPDFKKYSVDR 312          
BLAST of mRNA_H-paniculata_contig10109.96.1 vs. uniprot
Match: A0A835YIP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIP3_9STRA)

HSP 1 Score: 359 bits (922), Expect = 5.800e-121
Identity = 170/287 (59.23%), Postives = 221/287 (77.00%), Query Frame = 1
Query:   10 PILIVTILPPVNLKKKYGARWALVTGGGSGIGKALVEELALQGLNVVIVSMDDNFLADTFASVKTQFPDQEFRKVGATFSPEVKYMEMIKEATKDINVQCVFNNAGFIVTGFFEASPEGKQMANLECNATASAKISHHFIGRMIREKQKGCIVFTSSVVAYIPGPFSAMYGATKAFMSNLAASLSVEVRAKGIDVLAVHPSPVNSQFYNNLDHKIEMMDKAKKTAVAPNVLPREIFKSIGRVVWRDIGGMAVGVRIGTKMLSYNFLATAFAMAAPYLPDYKKNDVGR 870
            P+L   +LP  NLKKKYGA WALVTGG SGIG+ALVE LALQG NVVIV++    L +T A++   F DQ+F KVG  F+P V YM  IKEAT  + +QC+FNNAG+IVTGF++++   KQ AN+ECNA A+A+I+HHF+GR+I  + +GC+VFTSS VAY+P PF  MYGATKAF++N A SL+ EVR KG+DVL++HPSPV + FY+ LDH+I+MMDKA + AVA + LP+ IFKS+GRVVWR++G  AV +R+   +L  NFL  + A+AAP+LPDYK +DV R
Sbjct:   32 PLLATMVLPAQNLKKKYGAEWALVTGGSSGIGRALVEALALQGFNVVIVALGGGLLDETHAALSAAFKDQKFVKVGVNFAPGVDYMTPIKEATDGLPIQCIFNNAGYIVTGFYDSTLGAKQAANMECNAVAAARITHHFLGRLIAARLRGCVVFTSSAVAYMPAPFCVMYGATKAFLTNFAGSLAAEVRCKGVDVLSIHPSPVATAFYSGLDHRIDMMDKAARGAVAASTLPKVIFKSVGRVVWREVGAPAVIMRLSASLLPGNFLYWSSAVAAPFLPDYKTHDVNR 318          
BLAST of mRNA_H-paniculata_contig10109.96.1 vs. uniprot
Match: A0A7R9WZI5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZI5_9STRA)

HSP 1 Score: 354 bits (909), Expect = 8.750e-119
Identity = 165/290 (56.90%), Postives = 220/290 (75.86%), Query Frame = 1
Query:    1 FAVPILIVTILPPVNLKKKYGARWALVTGGGSGIGKALVEELALQGLNVVIVSMDDNFLADTFASVKTQFPDQEFRKVGATFSPEVKYMEMIKEATKDINVQCVFNNAGFIVTGFFEASPEGKQMANLECNATASAKISHHFIGRMIREKQKGCIVFTSSVVAYIPGPFSAMYGATKAFMSNLAASLSVEVRAKGIDVLAVHPSPVNSQFYNNLDHKIEMMDKAKKTAVAPNVLPREIFKSIGRVVWRDIGGMAVGVRIGTKMLSYNFLATAFAMAAPYLPDYKKNDVGR 870
            + +P LI+      +LKKKY A WALVTGGGSGIGK+L  +LA QGLNVVIVS+DD+FL +T   +K ++PD +FR VG  F+P   YM+ I+EAT D+++QC+FNNAGF+VTGFF+ +P  K M N+ECNATA+ +I+HHF+G+++ +K +GC+VFTSSV  Y+P PFS+ YGATKAF+S LA  L +E+++ GIDV AV+PSPV S FY  LDHKI++++ A+K AV P+ LP E+FKSIG    RD+GGMA+G R+GT  ++YNF    FA AAPYLPDYK +   R
Sbjct:   46 YTIPQLIMAFRAVPDLKKKYDAEWALVTGGGSGIGKSLAFKLASQGLNVVIVSLDDDFLKETMKQLKDKYPDLKFRSVGVNFAPNTDYMKPIREATDDLHIQCIFNNAGFLVTGFFDQAPLPKLMVNMECNATAAFQITHHFVGKLVSKKSRGCVVFTSSVAGYVPTPFSSSYGATKAFISQLACCLHIELKSLGIDVCAVNPSPVASNFYAKLDHKIDLLESARKQAVTPDALPDEMFKSIGMCALRDVGGMALGTRMGTFFIAYNFFTGIFAAAAPYLPDYKTHSKTR 335          
BLAST of mRNA_H-paniculata_contig10109.96.1 vs. uniprot
Match: A0A7R9ZAP0_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9ZAP0_9STRA)

HSP 1 Score: 349 bits (895), Expect = 1.420e-116
Identity = 171/290 (58.97%), Postives = 213/290 (73.45%), Query Frame = 1
Query:    1 FAVPILIVTILPPVNLKKKYGARWALVTGGGSGIGKALVEELALQGLNVVIVSMDDNFLADTFASVKTQFPDQEFRKVGATFSPEVKYMEMIKEATKDINVQCVFNNAGFIVTGFFEASPEGKQMANLECNATASAKISHHFIGRMIREKQKGCIVFTSSVVAYIPGPFSAMYGATKAFMSNLAASLSVEVRAKGIDVLAVHPSPVNSQFYNNLDHKIEMMDKAKKTAVAPNVLPREIFKSIGRVVWRDIGGMAVGVRIGTKMLSYNFLATAFAMAAPYLPDYKKNDVGR 870
            + +P L V I P  +LKKKY A+WALVTGGGSGIGKAL  +LA QGLNVV+VS+DD+ L  T   +K  +P+  FR VG TFSP V YM+ IK+ATKDI V  VFNNAGFIVTGF + +P GK +AN+ECNATA+  I+HHF+  M+ +K KGCIVFTSSV  +IP PF+AMY +TKAF+S  A SL +EV+  GIDV A+HPSPV S FY+ +DHKIE+M+ A+K+AV P  LP +I +SIG    RD+GGMA   R+GT  L YNF    F  AAP+LPDYKK++  R
Sbjct:   52 YLIPQLFVCIRPVPDLKKKYNAKWALVTGGGSGIGKALCFKLASQGLNVVVVSLDDDVLKTTMKELKETYPELSFRSVGCTFSPGVDYMKQIKDATKDIEVPIVFNNAGFIVTGFLDQAPIGKLLANIECNATAAVNITHHFVQVMVSKKLKGCIVFTSSVAGFIPTPFAAMYASTKAFLSQFACSLHIEVQNLGIDVCAIHPSPVASNFYDKVDHKIELMEAAQKSAVPPQQLPNDILRSIGACALRDLGGMAWSTRMGTFFLPYNFFTEMFTAAAPFLPDYKKHNKSR 341          
BLAST of mRNA_H-paniculata_contig10109.96.1 vs. uniprot
Match: A0A7S1XLR4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLR4_9STRA)

HSP 1 Score: 347 bits (890), Expect = 3.380e-116
Identity = 166/287 (57.84%), Postives = 216/287 (75.26%), Query Frame = 1
Query:   10 PILIVTILPPVNLKKKYGARWALVTGGGSGIGKALVEELALQGLNVVIVSMDDNFLADTFASVKTQFPDQEFRKVGATFSPEVKYMEMIKEATKDINVQCVFNNAGFIVTGFFEASPEGKQMANLECNATASAKISHHFIGRMIREKQKGCIVFTSSVVAYIPGPFSAMYGATKAFMSNLAASLSVEVRAKGIDVLAVHPSPVNSQFYNNLDHKIEMMDKAKKTAVAPNVLPREIFKSIGRVVWRDIGGMAVGVRIGTKMLSYNFLATAFAMAAPYLPDYKKNDVGR 870
            PIL++ +LP  +LKKKY A WALVTG GSGIG+ LV +LA QG NVV+VS+DD FLA+T   V +QFP QEFRKVG  F+P  KYM++I+  T DI+VQC+FNNAG++VTGFF+     KQ+ NLECN TA+  ++HHF+G+++ +K KGCIVFTSSV  YIP PFS++YGATKAF+S  A  ++VE    GIDV +VHPSPVNS FY+ + HKI+M++KAK  AV P+VLP +IF +IGRVV RD+G  A+ +R+   ++SYNFL  AF   AP +PD+KK    R
Sbjct:   28 PILVMNLLPVPDLKKKYNAEWALVTGAGSGIGRELVFKLARQGFNVVLVSLDDKFLAETMDLVTSQFPSQEFRKVGCLFAPGQKYMKLIERKTADIDVQCIFNNAGYLVTGFFDREASTKQLGNLECNTTAAVAVTHHFLGKLVDKKLKGCIVFTSSVAGYIPSPFSSVYGATKAFLSQFACCIAVEAAPCGIDVCSVHPSPVNSNFYDKV-HKIDMLEKAKAAAVTPDVLPDQIFGAIGRVVLRDMGVFAIAIRLLVSIMSYNFLTQAFCAFAPTMPDFKKFGADR 313          
BLAST of mRNA_H-paniculata_contig10109.96.1 vs. uniprot
Match: A0A7S0UI44_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UI44_9STRA)

HSP 1 Score: 347 bits (889), Expect = 6.970e-116
Identity = 173/290 (59.66%), Postives = 213/290 (73.45%), Query Frame = 1
Query:    1 FAVPILIVTILPPVNLKKKYGARWALVTGGGSGIGKALVEELALQGLNVVIVSMDDNFLADTFASVKTQFPDQEFRKVGATFSPEVKYMEMIKEATKDINVQCVFNNAGFIVTGFFEASPEGKQMANLECNATASAKISHHFIGRMIREKQKGCIVFTSSVVAYIPGPFSAMYGATKAFMSNLAASLSVEVRAKGIDVLAVHPSPVNSQFYNNLDHKIEMMDKAKKTAVAPNVLPREIFKSIGRVVWRDIGGMAVGVRIGTKMLSYNFLATAFAMAAPYLPDYKKNDVGR 870
            +++P L V   P  NLK +Y A WALVTGGGSGIGKAL  +LA QGLNVVIVS+DD+ L  T   +K  FP  EFR VG  F+P V Y++ I+EATKDI V  VFNNAGF+VTGFF+ +P GK + N+ECNATA+  ISHHF  +++  K+KGCIVFTSSV  +IP PFS MYGATKAF+S LA SL +E+++ GIDV AVHPSPV S FYN+LDHKI++++ A K AV P  LP +IF+SIG    RD+GGMAV  R+GT  L YNF    FA AAPYLPD+K ++  R
Sbjct:   37 YSLPQLYVAFRPVPNLKTRYDASWALVTGGGSGIGKALSFKLARQGLNVVIVSLDDDILKATMVQLKETFPKLEFRCVGVNFAPGVDYLKQIQEATKDIEVSIVFNNAGFLVTGFFDQAPLGKLLVNMECNATAAVNISHHFASKLVSAKKKGCIVFTSSVAGFIPTPFSGMYGATKAFVSQLACSLHIELQSLGIDVCAVHPSPVASNFYNDLDHKIDILESACKQAVPPEDLPDDIFRSIGCCALRDLGGMAVSSRMGTFFLPYNFFTEMFAAAAPYLPDWKTHNKTR 326          
BLAST of mRNA_H-paniculata_contig10109.96.1 vs. uniprot
Match: A0A7S2VYY4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYY4_9STRA)

HSP 1 Score: 344 bits (883), Expect = 7.670e-115
Identity = 167/290 (57.59%), Postives = 214/290 (73.79%), Query Frame = 1
Query:    1 FAVPILIVTILPPVNLKKKYGARWALVTGGGSGIGKALVEELALQGLNVVIVSMDDNFLADTFASVKTQFPDQEFRKVGATFSPEVKYMEMIKEATKDINVQCVFNNAGFIVTGFFEASPEGKQMANLECNATASAKISHHFIGRMIREKQKGCIVFTSSVVAYIPGPFSAMYGATKAFMSNLAASLSVEVRAKGIDVLAVHPSPVNSQFYNNLDHKIEMMDKAKKTAVAPNVLPREIFKSIGRVVWRDIGGMAVGVRIGTKMLSYNFLATAFAMAAPYLPDYKKNDVGR 870
            + +P + + I P  NLK++Y A+WALVTG GSGIGKAL  +LA QGLNVV+VS+DD +L  T   +K  +PD EFR +G TFSP V Y++ I+EATKDI ++ +FNNAGFIVTGF + +P GK +AN+ECNATAS  I+H  + +M++ K KGCIVFTSSV  +IP PF+AMY +TKAF+S +A SL +EV+  GIDV AVHPSPV S FY+ +DHKIE+M+ A+K AV P  LP EIF+SIG    RD+GGMA   R+GT  L +NF    F  AAPYLPDYKK++  R
Sbjct:   46 YLIPQVFMCIRPIPNLKERYDAKWALVTGAGSGIGKALAFKLATQGLNVVLVSLDDEYLKATIKELKESYPDLEFRCIGVTFSPGVNYLQQIEEATKDIEIKIIFNNAGFIVTGFLDQTPLGKLLANIECNATASVNITHWALQKMVKNKWKGCIVFTSSVAGFIPTPFAAMYASTKAFVSQMACSLHIEVQNLGIDVCAVHPSPVASNFYDKVDHKIELMEAAQKAAVPPEDLPNEIFRSIGACALRDMGGMAWSTRMGTFFLPFNFFTELFTAAAPYLPDYKKHNQTR 335          
BLAST of mRNA_H-paniculata_contig10109.96.1 vs. uniprot
Match: A0A7S2I2H6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2H6_9STRA)

HSP 1 Score: 343 bits (881), Expect = 1.220e-114
Identity = 165/290 (56.90%), Postives = 215/290 (74.14%), Query Frame = 1
Query:    1 FAVPILIVTILPPVNLKKKYGARWALVTGGGSGIGKALVEELALQGLNVVIVSMDDNFLADTFASVKTQFPDQEFRKVGATFSPEVKYMEMIKEATKDINVQCVFNNAGFIVTGFFEASPEGKQMANLECNATASAKISHHFIGRMIREKQKGCIVFTSSVVAYIPGPFSAMYGATKAFMSNLAASLSVEVRAKGIDVLAVHPSPVNSQFYNNLDHKIEMMDKAKKTAVAPNVLPREIFKSIGRVVWRDIGGMAVGVRIGTKMLSYNFLATAFAMAAPYLPDYKKNDVGR 870
            + +P + ++  P  +LKK+Y A WALVTG GSGIGKAL  +LA QGLNVV+VS+DD+FL  T   ++ ++P  +FR VG TFSP V Y++ IKEATKDI V+ VFNNAGFIVTGF + SP GK +AN+ECN TA   I+HHF+  M+ +K KGC+V+TSSV  +IP PF+AMY +TKAF+S +A  L +EV+  GIDV AVHPSPV S FY+ +DHKIE+M+ A+K+AV P  LP +IF+SIG    RD+GGMA G R+GT  L +NF    F +AAP+LPDYKK++  R
Sbjct:   39 YLLPQIFMSFRPVPDLKKRYDAEWALVTGSGSGIGKALAFKLASQGLNVVLVSIDDDFLKQTMKDIQAEYPKLKFRSVGVTFSPGVPYLDKIKEATKDIEVKIVFNNAGFIVTGFLDQSPLGKLLANVECNTTACVNITHHFLSIMVAKKWKGCVVYTSSVAGFIPTPFAAMYASTKAFLSQMACCLHIEVQNLGIDVCAVHPSPVASNFYDKVDHKIELMEAAQKSAVPPQDLPNDIFRSIGACALRDLGGMAWGTRMGTFFLPFNFFTEMFTVAAPFLPDYKKHNQTR 328          
BLAST of mRNA_H-paniculata_contig10109.96.1 vs. uniprot
Match: B8BU45_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BU45_THAPS)

HSP 1 Score: 339 bits (869), Expect = 2.000e-113
Identity = 165/281 (58.72%), Postives = 207/281 (73.67%), Query Frame = 1
Query:   28 ILPPVNLKKKYGARWALVTGGGSGIGKALVEELALQGLNVVIVSMDDNFLADTFASVKTQFPDQEFRKVGATFSPEVKYMEMIKEATKDINVQCVFNNAGFIVTGFFEASPEGKQMANLECNATASAKISHHFIGRMIREKQKGCIVFTSSVVAYIPGPFSAMYGATKAFMSNLAASLSVEVRAKGIDVLAVHPSPVNSQFYNNLDHKIEMMDKAKKTAVAPNVLPREIFKSIGRVVWRDIGGMAVGVRIGTKMLSYNFLATAFAMAAPYLPDYKKNDVGR 870
            I P  +LKKKY A WALVTG GSGIGKAL  +LA QGLNVV+VS+DD  L +T   +K Q+P  EFR VGA FSP V Y+  I EATKDI +QC+FNNAGFIVTGF + +   K +AN+ECNATAS  ++HHF+ +++  KQKGCIVFTSSV  +IP PF+A Y ATKAF+S LA SL +EV++ GIDV AVHPSPV S FY  ++HKI++M++A+K+AV P  LP EI +SIG    RD+GGMA G RI T  + +NF    F +AAP+LPDYK ++  R
Sbjct:    3 IRPIQDLKKKYNAEWALVTGSGSGIGKALAFKLASQGLNVVLVSLDDEHLKNTMKELKQQYPKLEFRSVGACFSPGVDYLTQIDEATKDITIQCIFNNAGFIVTGFVDQTALPKLLANVECNATASFAVAHHFLQKLVSNKQKGCIVFTSSVAGFIPTPFAASYAATKAFVSQLACSLHIEVQSLGIDVCAVHPSPVASNFYEKVEHKIDLMEQAQKSAVGPEALPNEILRSIGACALRDLGGMAWGTRIFTFFIPFNFFTELFTVAAPFLPDYKTHNKNR 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10109.96.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJS1_ECTSI1.840e-17684.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1NV24_HETAK1.830e-12261.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YIP3_9STRA5.800e-12159.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9WZI5_9STRA8.750e-11956.90Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7R9ZAP0_9STRA1.420e-11658.97Hypothetical protein n=2 Tax=Odontellaceae TaxID=2... [more]
A0A7S1XLR4_9STRA3.380e-11657.84Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0UI44_9STRA6.970e-11659.66Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S2VYY4_9STRA7.670e-11557.59Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2I2H6_9STRA1.220e-11456.90Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8BU45_THAPS2.000e-11358.72Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10109contigH-paniculata_contig10109:3977..7739 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score411.0
Seed ortholog evalue3.8e-112
Seed eggNOG ortholog2880.D7FJS1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Enoyl-(Acyl carrier protein) reductase
EggNOG OGs2QS5G@2759,COG0300@1
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-06_010420.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size979
Cds size714
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10109.96.1prot_H-paniculata_contig10109.96.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10109 6096..7633 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928718.4868467-UTR-H-paniculata_contig10109:3976..40601622928718.4868467-UTR-H-paniculata_contig10109:3976..4060Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10109 3977..4060 +
1691480592.4149315-UTR-H-paniculata_contig10109:3976..40601691480592.4149315-UTR-H-paniculata_contig10109:3976..4060Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10109 3977..4060 +
1622928718.503124-UTR-H-paniculata_contig10109:5430..54811622928718.503124-UTR-H-paniculata_contig10109:5430..5481Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10109 5431..5481 +
1691480592.4325058-UTR-H-paniculata_contig10109:5430..54811691480592.4325058-UTR-H-paniculata_contig10109:5430..5481Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10109 5431..5481 +
1622928718.5153542-UTR-H-paniculata_contig10109:6071..60951622928718.5153542-UTR-H-paniculata_contig10109:6071..6095Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10109 6072..6095 +
1691480592.4497573-UTR-H-paniculata_contig10109:6071..60951691480592.4497573-UTR-H-paniculata_contig10109:6071..6095Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10109 6072..6095 +
1622928718.571602-UTR-H-paniculata_contig10109:7633..77391622928718.571602-UTR-H-paniculata_contig10109:7633..7739Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10109 7634..7739 +
1691480592.5056453-UTR-H-paniculata_contig10109:7633..77391691480592.5056453-UTR-H-paniculata_contig10109:7633..7739Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10109 7634..7739 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928718.5284138-CDS-H-paniculata_contig10109:6095..62141622928718.5284138-CDS-H-paniculata_contig10109:6095..6214Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10109 6096..6214 +
1691480592.4632242-CDS-H-paniculata_contig10109:6095..62141691480592.4632242-CDS-H-paniculata_contig10109:6095..6214Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10109 6096..6214 +
1622928718.5381248-CDS-H-paniculata_contig10109:6512..66451622928718.5381248-CDS-H-paniculata_contig10109:6512..6645Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10109 6513..6645 +
1691480592.4733129-CDS-H-paniculata_contig10109:6512..66451691480592.4733129-CDS-H-paniculata_contig10109:6512..6645Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10109 6513..6645 +
1622928718.547821-CDS-H-paniculata_contig10109:6825..69291622928718.547821-CDS-H-paniculata_contig10109:6825..6929Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10109 6826..6929 +
1691480592.4844363-CDS-H-paniculata_contig10109:6825..69291691480592.4844363-CDS-H-paniculata_contig10109:6825..6929Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10109 6826..6929 +
1622928718.5583668-CDS-H-paniculata_contig10109:7275..76331622928718.5583668-CDS-H-paniculata_contig10109:7275..7633Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10109 7276..7633 +
1691480592.4965498-CDS-H-paniculata_contig10109:7275..76331691480592.4965498-CDS-H-paniculata_contig10109:7275..7633Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10109 7276..7633 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10109.96.1

>prot_H-paniculata_contig10109.96.1 ID=prot_H-paniculata_contig10109.96.1|Name=mRNA_H-paniculata_contig10109.96.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
MDDNFLADTFASVKTQFPDQEFRKVGATFSPEVKYMEMIKEATKDINVQC
VFNNAGFIVTGFFEASPEGKQMANLECNATASAKISHHFIGRMIREKQKG
CIVFTSSVVAYIPGPFSAMYGATKAFMSNLAASLSVEVRAKGIDVLAVHP
SPVNSQFYNNLDHKIEMMDKAKKTAVAPNVLPREIFKSIGRVVWRDIGGM
AVGVRIGTKMLSYNFLATAFAMAAPYLPDYKKNDVGR*
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mRNA from alignment at H-paniculata_contig10109:3977..7739+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10109.96.1 ID=mRNA_H-paniculata_contig10109.96.1|Name=mRNA_H-paniculata_contig10109.96.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3763bp|location=Sequence derived from alignment at H-paniculata_contig10109:3977..7739+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTGCAGTTCCGATTCTGATCGTGACGATTCTCCCGCCTGTGAACCTCAA GAAGAAATATGGGGCCCGCTGGGCTCTAGTCACTGTAAGTTGTGCGCACT GTCGTGCGGGTTATTTGGGCGTATTTCTCCCTGTTGGCTGGCGGACCCCT ACGAAGAATTTCCTTTTTGTTTTTTTAACCGTAGGAGTTCTCGAAAGAAG TCGGTATACGTTTTGGTGACATTTACCGTAGTTCACAGCGTTTGAGACGG GTGCCGTGGTGTACCTACCATGCCCCCTCTTCCCGAATGCGATCCCCCCG GATAGCAATTTTGGTACTTTTAGACGTTATCACCGGCGTTACGGAGTATA CCATCCCCGGTAGCAACTGGAGTGATGATATAGTACGCCAACCTGGTGAT AGCCGAGGTAGTTTGTAATGAACGAAAACAGTCCAGGCGATAATCTTCAT AATAACCTTGTTGAGACTGTACATAGAGACAAGTGAGTATGTTGTGTTGT TTCCATTTGATTGTTGTGCTTTCGTTTTGGATTTTTCTTCCGTTTGGGCT TGCAAGTCGTTGGGTCTCCAAATGTCCAGCGACTATACGTCGGAGGAATT GGGCAAACGCACGAATATAAATGCAGGAATTGTTCCCCCAATGATACCTC TCTTGTGTTGAGATCAACACCCGTGCCGCAACATTTGCTACCACAAATCA TCTAGGGCAAGCGGTAGAAGTACAATAGATTCATCTCTTGGAAACTATGC TCGTGCATCTCCTCATAATCACACCCCAGATCCAGGCAGGGGGTACGCAC AAATACGCTCTTCAGCGAAAACCTTGGTCCATGCTATTCCCGTGCTTTGC GGCTGCTGCGTGCGAGGCTTCTGTGATGAAAACATACACCGTACCATGGC ATGCGATCACCCCCTGCGTGATGGGTGTGGTACTCTGCTGCATGCCATAC TATCACCCGCCCCCCCGTGCTTATCACCCATTTTCTCCCAAGCATGCTAT CACGGGCGGTATGGTGTGCACTCCCCTCGCCCGCGCTGCTGCTGCCAAAT GCCATCCCCGGTGATGAATATTCCGACGAACAAATATTTTTACTATGGGA GTTGTTATACTCGGGACTACACTGTGAACTGCGGTATTGATTAGTGTGGA TTGCCAAACACTGGTACTGATAATAAGGGGAATATGACCCAACAGTTGTA ATGTTCGTTTTCTACCGTCAATCATCACCCTGCACCACTTCATGGCGGCA ACGAAACCAATAAATCGAAGTTTTTCAACTCGCCATCACTCGAGAGTAAT GACGCGACCGTAGCCGACTCGACGCTGTTTGATCGTCGTGCTGAATAGCT ACAGGGGTGTCGTCGATGTTATCTTTCTTCTCTCTCTCTTTCTCTCTCTC TCTTTCTCTCTCTCTCTCTCTCTGTTCTTTTGTGTTTTTTTCTGCCTCAT CAAGGGTGGCGGCAGTGGCATCGGGAAGGCGTTGGTGGAGGAGCTGGCGT TGCAGGTGAGGCAGTATAATTGTTTTTACGCGTGCTTTGTTTGTAAAATG CCCTATAATAGGTTGCTTTGTACACTATTTCAGTGTCGTCTGGCGGATAG TCCCGCCACGACGTGTTCCCCCTTGGATTCGCGATGCTTCGTTGGCCGAC AGCGTGTAACTGATGGGACACTACCTGTTCTCCATTGATACCGCAAGGAG CCTGGTGATCAAGTTCGGGTTCGCGCGAAGAGTTAGCAGTCCTTTGTGTG CGCGCCTTTACAGAAGAAAACCCTGACACCCATGTGGATAGTTTGCGACG CGGTAGGGTTAACCGTGCCTCAGATGAGTGAAAAGAGAAATCCACTGGGA TGTTTCCACTCAAAGCGCTTCTTCGATCGACGTTTTTTTTTTGTTTGCGT AATCACACAACGAGAAAATGTCGCTGAGACGTCACAAGTACCAGCTGATC GTGATTAACATGTAGAAAGTAACGAAGTCATCCTCAACTGTTTCAGCAAC AACGGGTATATTTGGTGACCCCCAACTACTGCGCGTGCAATCGATCGCTA ATTGCCATTTTTCACGACCCGCACTTTTCTGGTTTTTTTTCTCAGGGGTT AAATGTCGTAATCGTGTCCATGGACGACAACTTCCTAGCGGATACCTTCG CCTCTGTGAAGACCCAGTTCCCTGATCAAGAATTCCGAAAAGTTGGAGCA ACGTTCTCTCCCGAAGTGAAGTACATGGAAATGATCAAGTGAGGTTCCAC TATTTTCCTCGTCTCGAGGACCCATTGTGAGATCGCTCACGTTCTTCACC ATTTCTGCTGGCTGTACGCTCGTCAGTAATTGCCCCACAGTTGCCAACGC TAAGGGCTGCGCAAAGTTGTGCAGTGTGCCAGAAATGGTACACTCTTGAT CTTTATCTATACTGATGTAGACATCTTTCGCCCCAAGAATGATCGATATG TTCAATGTCCATGATCGATACATGCGTTGATTTGATGCTGCCGTGGATGA AGACCAAAATTTTCGTTTTGGTTTTATGCGGAACAGAGAGGCGACGAAGG ACATCAACGTGCAGTGCGTCTTCAACAACGCGGGTTTTATCGTCACGGGG TTTTTCGAGGCTTCTCCTGAAGGAAAGCAGATGGCCAACCTGGAGTGTAA CGCTACTGCTTCGGCGAAGGTACGACCGTCATTATACCTGTAGCCTGTTT GTAACGTGCAATCGAACGGTCATCGTCGGGTTCTAGTCTGCAGCAGTGGG AGACCATTCACATCTACTCTACAAATATCGCCCCCGCAGTGTCGAAAGAG AGTCGCCTGACGCGTTCTTCTTGCATTATCAACCCTTGACTTTGTGCAGA TCTCTCACCACTTCATCGGAAGAATGATTCGCGAAAAACAGAAAGGTTGC ATCGTGTTCACCTCATCGGTCGTGGCTTACATCCCCGGCCCGTTCTCCGC TATGTGAGTATGTGAGACAGGCGTTCTCATGCGCTGCACAAGCCCTAGGA GCTTCTACTGTATGCAGTACATGTTTATCTGATCTGCGGAGCTGCTGCAC TACTGAATTTTTTCGAGGGTTGCGGATTTGACTGTTGATTGGCGGCGTGT TCTACATGAGGTTGGGAATCACATCCTGCGTTGTACCATATCTTGCATCA GACATGTCAATAGCTTTATCTGCAAGGTAGTCTTAGCGTCGAGCCAGAAA CACCACTTGACGCTTCCCTCTCAACATACCGCACTCCCTCACGCACACGG GCGGATGCACTACATTTCGTTGCCATCGTCTATCCGTTCGGTTTTACAGG TACGGGGCAACGAAGGCGTTCATGTCCAATCTGGCTGCATCTCTTTCGGT GGAGGTGCGGGCCAAGGGCATTGATGTTCTCGCGGTGCACCCGTCCCCCG TCAACAGCCAATTCTACAATAACCTCGACCATAAGATCGAAATGATGGAT AAGGCCAAGAAGACGGCGGTCGCACCCAACGTCTTACCTCGAGAAATTTT CAAGAGCATTGGGCGTGTGGTATGGCGCGATATTGGGGGCATGGCGGTGG GCGTACGCATCGGAACCAAGATGCTGAGCTACAATTTCCTCGCCACTGCG TTTGCCATGGCCGCCCCGTATTTGCCCGATTACAAGAAGAATGATGTAGG GCGGTAATAGTTGCCGTTAGCATATCTTACGTTATAGTAATAATATACTG TTGGATCCGATGCTGTGTGAATTTTACAATTTCGAACATTAGTCTTAGGG GAGAGAGCAGGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig10109:3977..7739+

>mRNA_H-paniculata_contig10109.96.1 ID=mRNA_H-paniculata_contig10109.96.1|Name=mRNA_H-paniculata_contig10109.96.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1428bp|location=Sequence derived from alignment at H-paniculata_contig10109:3977..7739+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACGACAACTTCCTAGCGGATACCTTCGCCTCTGTGAAGACCCAGTT
CCCTGATCAAGAATTCCGAAAAGTTGGAGCAACGTTCTCTCCCGAAGTGA
AGTACATGGAAATGATCAAATGGACGACAACTTCCTAGCGGATACCTTCG
CCTCTGTGAAGACCCAGTTCCCTGATCAAGAATTCCGAAAAGTTGGAGCA
ACGTTCTCTCCCGAAGTGAAGTACATGGAAATGATCAAAGAGGCGACGAA
GGACATCAACGTGCAGTGCGTCTTCAACAACGCGGGTTTTATCGTCACGG
GGTTTTTCGAGGCTTCTCCTGAAGGAAAGCAGATGGCCAACCTGGAGTGT
AACGCTACTGCTTCGGCGAAGAGAGGCGACGAAGGACATCAACGTGCAGT
GCGTCTTCAACAACGCGGGTTTTATCGTCACGGGGTTTTTCGAGGCTTCT
CCTGAAGGAAAGCAGATGGCCAACCTGGAGTGTAACGCTACTGCTTCGGC
GAAGATCTCTCACCACTTCATCGGAAGAATGATTCGCGAAAAACAGAAAG
GTTGCATCGTGTTCACCTCATCGGTCGTGGCTTACATCCCCGGCCCGTTC
TCCGCTATATCTCTCACCACTTCATCGGAAGAATGATTCGCGAAAAACAG
AAAGGTTGCATCGTGTTCACCTCATCGGTCGTGGCTTACATCCCCGGCCC
GTTCTCCGCTATGTACGGGGCAACGAAGGCGTTCATGTCCAATCTGGCTG
CATCTCTTTCGGTGGAGGTGCGGGCCAAGGGCATTGATGTTCTCGCGGTG
CACCCGTCCCCCGTCAACAGCCAATTCTACAATAACCTCGACCATAAGAT
CGAAATGATGGATAAGGCCAAGAAGACGGCGGTCGCACCCAACGTCTTAC
CTCGAGAAATTTTCAAGAGCATTGGGCGTGTGGTATGGCGCGATATTGGG
GGCATGGCGGTGGGCGTACGCATCGGAACCAAGATGCTGAGCTACAATTT
CCTCGCCACTGCGTTTGCCATGGCCGCCCCGTATTTGCCCGATTACAAGA
AGAATGATGTAGGGCGGTAAGTACGGGGCAACGAAGGCGTTCATGTCCAA
TCTGGCTGCATCTCTTTCGGTGGAGGTGCGGGCCAAGGGCATTGATGTTC
TCGCGGTGCACCCGTCCCCCGTCAACAGCCAATTCTACAATAACCTCGAC
CATAAGATCGAAATGATGGATAAGGCCAAGAAGACGGCGGTCGCACCCAA
CGTCTTACCTCGAGAAATTTTCAAGAGCATTGGGCGTGTGGTATGGCGCG
ATATTGGGGGCATGGCGGTGGGCGTACGCATCGGAACCAAGATGCTGAGC
TACAATTTCCTCGCCACTGCGTTTGCCATGGCCGCCCCGTATTTGCCCGA
TTACAAGAAGAATGATGTAGGGCGGTAA
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