mRNA_H-paniculata_contig101.86.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: D8LPP7_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP7_ECTSI) HSP 1 Score: 237 bits (604), Expect = 2.570e-76 Identity = 115/197 (58.38%), Postives = 150/197 (76.14%), Query Frame = 1 Query: 1 AGTPVSKTVCVLTTAVTLAVLSNKSQDAFSTSALRIFGEEKQWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIELALCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQILFSV 591 AG PVSK++ ++T TL VL N SQD + +R+FG++ QWWRL +S+F L SVWEL+L L++ R FRILERHLGS+K+ SFL LAA+L+KSIELALC++FP R P GPL ILSA+ YYGY+P T P Y T+G+ R+T K F Y A+L LAFHD+++S + AGCGV+VA LY + SPLQSFR+PG+ LF+V Sbjct: 7 AGAPVSKSLAIITAVSTLVVLQNNSQDTAALIGVRVFGDDGQWWRLLTSMFPLGSVWELILCLNIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPVFRPPLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVAFLYWSNRSPLQSFRIPGRQLFAV 203
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A6H5L6R3_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R3_9PHAE) HSP 1 Score: 239 bits (611), Expect = 4.570e-76 Identity = 115/197 (58.38%), Postives = 151/197 (76.65%), Query Frame = 1 Query: 1 AGTPVSKTVCVLTTAVTLAVLSNKSQDAFSTSALRIFGEEKQWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIELALCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQILFSV 591 AG PVSK++ ++T TL VL N SQD + +R+FG++ QWWRL +S+F L SVWEL+L L++ R FRILERHLGS+K+ SFL LAA+L+KSIELALC++FP+ R P GPL ILSA+ YYGY+P T P Y T+G+ R+T K F Y A+L LAFHD+++S + AGCGV+VALLY SPLQSFR+PG+ LF++ Sbjct: 7 AGAPVSKSLAIVTAVSTLVVLQNNSQDTAALIGIRVFGDDGQWWRLLTSMFPLGSVWELILCLNIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRPPLGPLPILSAVGVAYYGYIPSTAPAYLTVGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPGRQLFAI 203
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A1C7NLX4_9FUNG (DSC E3 ubiquitin ligase complex subunit 2 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NLX4_9FUNG) HSP 1 Score: 84.3 bits (207), Expect = 1.040e-15 Identity = 46/153 (30.07%), Postives = 83/153 (54.25%), Query Frame = 1 Query: 124 QWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIELALCI---QFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPG 573 Q+WRLF+S + + ++ L T R++ER GS+KY +F+ L+ ++ +E+ + Q PSGP +IL + Y+ +P T F + +T+K+F Y+ + +AF S+ +L+PA CG++ LY + ++ +R PG Sbjct: 52 QFWRLFTSHVAFGNSGDVFFGSLLLYTLRVIERQYGSAKYVAFIALSTIIATFLEIGXLVVGAQIGLKSIPSGPYAILFSSLYQYHRIIPITYR--FRIFGIVMTDKLFLYILAIQMAFSQSYQTLVPALCGLLTGALYRTDITNMKQWRFPG 202
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A0W0FM30_9AGAR (CUE domain-containing protein n=2 Tax=Moniliophthora roreri TaxID=221103 RepID=A0A0W0FM30_9AGAR) HSP 1 Score: 66.6 bits (161), Expect = 1.630e-9 Identity = 48/161 (29.81%), Postives = 80/161 (49.69%), Query Frame = 1 Query: 124 QWWRLFSSLFSLASVWELMLT-LHLARTFRILERHLGSSKYASFLVLAAVLTKSIELA---LCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRI-----TEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQI 579 Q+WR + + +S +L+L L L ++ERH G+ K+ASF++++ +LT +EL LC P+GP ++ +L Y +P ++ DFRI + K FTY+ + LAF S A G++ +Y PL+S+R+ I Sbjct: 35 QYWRFITHNLAFSSSGDLLLAELVLFNVGVVVERHFGTLKFASFVLISTILTALLELVVLVLCRNLGITHIPAGPSALFFSLLYQYSRIIP-------SVYDFRIFGVPLSNKSFTYILAVQLAFGRLPGSAATALIGIVAGQIYRSDIIPLKSYRIAPSI 188
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: UPI001C7BA63F (uncharacterized protein n=1 Tax=Marasmius oreades TaxID=181124 RepID=UPI001C7BA63F) HSP 1 Score: 64.3 bits (155), Expect = 1.130e-8 Identity = 44/161 (27.33%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 124 QWWRLFSSLFSLASVWELMLT-LHLARTFRILERHLGSSKYASFLVLAAVLTKSIELA---LCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRI-----TEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQI 579 Q+WRLF+ + +S +L+L L + ++ERH G+ K+ASF++++ L+ +EL L +F + P+GP +++ +L Y +P T+ DFR+ + K+FTY+ L ++ S+ A G++ +Y L+ +R+P + Sbjct: 45 QYWRLFTRNLAFSSSGDLLLAELIIFNVGILVERHFGTLKFASFVLVSTTLSTFLELVTLFLFRKFGLAQLPAGPSALIYSLLYQYARIIP-------TVYDFRVFGIPLSNKIFTYILALQMSLSRLPGSVTVALIGILSGQMYRSDIVNLKGYRIPPSV 198
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: L0PB06_PNEJ8 (UBA domain-containing protein n=3 Tax=Pneumocystis TaxID=4753 RepID=L0PB06_PNEJ8) HSP 1 Score: 63.9 bits (154), Expect = 1.300e-8 Identity = 42/168 (25.00%), Postives = 85/168 (50.60%), Query Frame = 1 Query: 124 QWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIE---LALCIQ------FPYLRQPSGPLSILSALTTMYYGYVPCT-------TPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQI 579 Q+WR+F+ A+ E++ + + + RI+ERH G+ KYASF++L+ V T + L + ++ + Y+ P GP ++ ++ Y+ +P + +P + ++ K++ Y+ L F S S++ AG G +V Y + P ++++P +I Sbjct: 51 QYWRIFTWQMIYANAGEVLFGILMIYSLRIVERHFGARKYASFIILSLVYTSILTPLFLGVVVKPLSSGRYQYI--PPGPTALFFSVLAQYHTIIPSSYKFKVLDSPSFNHKKGLIMSNKIYMYIVSFQLLFAQSPGSIISAGIGWLVGRFYVFKWLPGANWQIPKRI 216
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A507C6J2_9FUNG (UBA domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C6J2_9FUNG) HSP 1 Score: 63.2 bits (152), Expect = 2.430e-8 Identity = 46/160 (28.75%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 115 EEKQWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIELALCI---QFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSP--LQSFRVPGQI 579 + Q WRL S+ + A+ E++ L R++ERH GS K+AS++VL++V++ +++ + F R +GP S L AL Y +P T F L + +K+F Y+ L S++P+ CG + +L + L+ +R+P I Sbjct: 48 QHHQLWRLVSTHVAFANSSEILFGGLLMYHMRLIERHWGSRKFASYVVLSSVISTVLDVTCLLLGNSFGLTRIAAGPWSCLYALLYNYVSSIPITYK--FKLMGVTLNDKMFVYLLAAQLLLGSYPYSVIPSACGWVTGILLQSDVASVYLKKWRIPKGI 205
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A367KLM0_RHIST (CUE domain-containing protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KLM0_RHIST) HSP 1 Score: 62.0 bits (149), Expect = 4.500e-8 Identity = 35/110 (31.82%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 211 ILERHLGSSKYASFLVLAAVLTKSIE---LALCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLY 531 ++ER GS+KY +F+ ++ V+ +E L L Q P GP +++ + Y+ +P T F + +++K+F YV L +AF S+ +L+PA CGV+ LY Sbjct: 1 VIERQYGSAKYMAFISISIVIATLLEVGALVLGAQIGLKSIPGGPYALIFSSLYQYHRIIPITYR--FRIFGVVMSDKLFLYVLALQMAFSQSYQTLIPALCGVLSGALY 108
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: M7NMN8_PNEMU (UBA domain-containing protein n=3 Tax=Pneumocystis TaxID=4753 RepID=M7NMN8_PNEMU) HSP 1 Score: 60.5 bits (145), Expect = 2.100e-7 Identity = 43/164 (26.22%), Postives = 77/164 (46.95%), Query Frame = 1 Query: 124 QWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIE-LALCIQFPYLRQ------PSGPLSILSALTTMYYGYVPCTTPIYF-----TLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQI 579 Q+WR+ + E++ RI+ERH G+ KYASF++L+ + T + L LC L Q P+GP +++ ++ Y+ +P + F ++ K++ Y+ L F +S S+L A G ++ LY + P +R+P +I Sbjct: 51 QYWRILGWQMIYINAGEVLFGTLTFYNLRIVERHFGARKYASFIILSFLYTSILTPLILCFIIKPLSQGRYQYLPAGPTALIFSILAQYHTIIPESYKFKVLNMPSAKKGFFLSNKIYLYILSFQLLFAESPGSILEAVTGWIIGRLYVFQYLPGVKWRIPKRI 214
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A507DHV5_9FUNG (UBA domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DHV5_9FUNG) HSP 1 Score: 59.7 bits (143), Expect = 4.320e-7 Identity = 44/157 (28.03%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 124 QWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIE---LALCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSP--LQSFRVPGQI 579 Q+WRL S+ + S E++ L R+LERH GS K+ASF+++++V++ +++ L L F GP + LSAL + +P T F + +T+K+F Y+ + + L+P CG + ++ +P ++ +R+P +I Sbjct: 76 QFWRLASTHMAFTSSSEVLFGGILIYHMRLLERHWGSYKFASFILISSVVSTALDVMSLLLLSNFNITHVSPGPYAALSALAYNFVVDIPLTYR--FKVMGVTVTDKMFVYLLGGQMLWCSWPHCLIPIVCGWITGMILKSDVAPVYIKKWRIPKRI 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig101.86.1 >prot_H-paniculata_contig101.86.1 ID=prot_H-paniculata_contig101.86.1|Name=mRNA_H-paniculata_contig101.86.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp AGTPVSKTVCVLTTAVTLAVLSNKSQDAFSTSALRIFGEEKQWWRLFSSLback to top mRNA from alignment at H-paniculata_contig101:19939..21622+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig101.86.1 ID=mRNA_H-paniculata_contig101.86.1|Name=mRNA_H-paniculata_contig101.86.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1684bp|location=Sequence derived from alignment at H-paniculata_contig101:19939..21622+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig101:19939..21622+ >mRNA_H-paniculata_contig101.86.1 ID=mRNA_H-paniculata_contig101.86.1|Name=mRNA_H-paniculata_contig101.86.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at H-paniculata_contig101:19939..21622+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |