mRNA_H-paniculata_contig101.86.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig101.86.1
Unique NamemRNA_H-paniculata_contig101.86.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: D8LPP7_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP7_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 2.570e-76
Identity = 115/197 (58.38%), Postives = 150/197 (76.14%), Query Frame = 1
Query:    1 AGTPVSKTVCVLTTAVTLAVLSNKSQDAFSTSALRIFGEEKQWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIELALCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQILFSV 591
            AG PVSK++ ++T   TL VL N SQD  +   +R+FG++ QWWRL +S+F L SVWEL+L L++ R FRILERHLGS+K+ SFL LAA+L+KSIELALC++FP  R P GPL ILSA+   YYGY+P T P Y T+G+ R+T K F Y A+L LAFHD+++S + AGCGV+VA LY  + SPLQSFR+PG+ LF+V
Sbjct:    7 AGAPVSKSLAIITAVSTLVVLQNNSQDTAALIGVRVFGDDGQWWRLLTSMFPLGSVWELILCLNIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPVFRPPLGPLPILSAVGVAYYGYIPSTAPAYLTIGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVAFLYWSNRSPLQSFRIPGRQLFAV 203          
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A6H5L6R3_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R3_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 4.570e-76
Identity = 115/197 (58.38%), Postives = 151/197 (76.65%), Query Frame = 1
Query:    1 AGTPVSKTVCVLTTAVTLAVLSNKSQDAFSTSALRIFGEEKQWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIELALCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQILFSV 591
            AG PVSK++ ++T   TL VL N SQD  +   +R+FG++ QWWRL +S+F L SVWEL+L L++ R FRILERHLGS+K+ SFL LAA+L+KSIELALC++FP+ R P GPL ILSA+   YYGY+P T P Y T+G+ R+T K F Y A+L LAFHD+++S + AGCGV+VALLY    SPLQSFR+PG+ LF++
Sbjct:    7 AGAPVSKSLAIVTAVSTLVVLQNNSQDTAALIGIRVFGDDGQWWRLLTSMFPLGSVWELILCLNIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRPPLGPLPILSAVGVAYYGYIPSTAPAYLTVGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPGRQLFAI 203          
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A1C7NLX4_9FUNG (DSC E3 ubiquitin ligase complex subunit 2 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NLX4_9FUNG)

HSP 1 Score: 84.3 bits (207), Expect = 1.040e-15
Identity = 46/153 (30.07%), Postives = 83/153 (54.25%), Query Frame = 1
Query:  124 QWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIELALCI---QFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPG 573
            Q+WRLF+S  +  +  ++     L  T R++ER  GS+KY +F+ L+ ++   +E+   +   Q      PSGP +IL +    Y+  +P T    F +    +T+K+F Y+  + +AF  S+ +L+PA CG++   LY    + ++ +R PG
Sbjct:   52 QFWRLFTSHVAFGNSGDVFFGSLLLYTLRVIERQYGSAKYVAFIALSTIIATFLEIGXLVVGAQIGLKSIPSGPYAILFSSLYQYHRIIPITYR--FRIFGIVMTDKLFLYILAIQMAFSQSYQTLVPALCGLLTGALYRTDITNMKQWRFPG 202          
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A0W0FM30_9AGAR (CUE domain-containing protein n=2 Tax=Moniliophthora roreri TaxID=221103 RepID=A0A0W0FM30_9AGAR)

HSP 1 Score: 66.6 bits (161), Expect = 1.630e-9
Identity = 48/161 (29.81%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  124 QWWRLFSSLFSLASVWELMLT-LHLARTFRILERHLGSSKYASFLVLAAVLTKSIELA---LCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRI-----TEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQI 579
            Q+WR  +   + +S  +L+L  L L     ++ERH G+ K+ASF++++ +LT  +EL    LC        P+GP ++  +L   Y   +P       ++ DFRI     + K FTY+  + LAF     S   A  G++   +Y     PL+S+R+   I
Sbjct:   35 QYWRFITHNLAFSSSGDLLLAELVLFNVGVVVERHFGTLKFASFVLISTILTALLELVVLVLCRNLGITHIPAGPSALFFSLLYQYSRIIP-------SVYDFRIFGVPLSNKSFTYILAVQLAFGRLPGSAATALIGIVAGQIYRSDIIPLKSYRIAPSI 188          
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: UPI001C7BA63F (uncharacterized protein n=1 Tax=Marasmius oreades TaxID=181124 RepID=UPI001C7BA63F)

HSP 1 Score: 64.3 bits (155), Expect = 1.130e-8
Identity = 44/161 (27.33%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  124 QWWRLFSSLFSLASVWELMLT-LHLARTFRILERHLGSSKYASFLVLAAVLTKSIELA---LCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRI-----TEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQI 579
            Q+WRLF+   + +S  +L+L  L +     ++ERH G+ K+ASF++++  L+  +EL    L  +F   + P+GP +++ +L   Y   +P       T+ DFR+     + K+FTY+  L ++      S+  A  G++   +Y      L+ +R+P  +
Sbjct:   45 QYWRLFTRNLAFSSSGDLLLAELIIFNVGILVERHFGTLKFASFVLVSTTLSTFLELVTLFLFRKFGLAQLPAGPSALIYSLLYQYARIIP-------TVYDFRVFGIPLSNKIFTYILALQMSLSRLPGSVTVALIGILSGQMYRSDIVNLKGYRIPPSV 198          
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: L0PB06_PNEJ8 (UBA domain-containing protein n=3 Tax=Pneumocystis TaxID=4753 RepID=L0PB06_PNEJ8)

HSP 1 Score: 63.9 bits (154), Expect = 1.300e-8
Identity = 42/168 (25.00%), Postives = 85/168 (50.60%), Query Frame = 1
Query:  124 QWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIE---LALCIQ------FPYLRQPSGPLSILSALTTMYYGYVPCT-------TPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQI 579
            Q+WR+F+     A+  E++  + +  + RI+ERH G+ KYASF++L+ V T  +    L + ++      + Y+  P GP ++  ++   Y+  +P +       +P +       ++ K++ Y+    L F  S  S++ AG G +V   Y   + P  ++++P +I
Sbjct:   51 QYWRIFTWQMIYANAGEVLFGILMIYSLRIVERHFGARKYASFIILSLVYTSILTPLFLGVVVKPLSSGRYQYI--PPGPTALFFSVLAQYHTIIPSSYKFKVLDSPSFNHKKGLIMSNKIYMYIVSFQLLFAQSPGSIISAGIGWLVGRFYVFKWLPGANWQIPKRI 216          
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A507C6J2_9FUNG (UBA domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C6J2_9FUNG)

HSP 1 Score: 63.2 bits (152), Expect = 2.430e-8
Identity = 46/160 (28.75%), Postives = 80/160 (50.00%), Query Frame = 1
Query:  115 EEKQWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIELALCI---QFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSP--LQSFRVPGQI 579
            +  Q WRL S+  + A+  E++    L    R++ERH GS K+AS++VL++V++  +++   +    F   R  +GP S L AL   Y   +P T    F L    + +K+F Y+    L       S++P+ CG +  +L     +   L+ +R+P  I
Sbjct:   48 QHHQLWRLVSTHVAFANSSEILFGGLLMYHMRLIERHWGSRKFASYVVLSSVISTVLDVTCLLLGNSFGLTRIAAGPWSCLYALLYNYVSSIPITYK--FKLMGVTLNDKMFVYLLAAQLLLGSYPYSVIPSACGWVTGILLQSDVASVYLKKWRIPKGI 205          
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A367KLM0_RHIST (CUE domain-containing protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KLM0_RHIST)

HSP 1 Score: 62.0 bits (149), Expect = 4.500e-8
Identity = 35/110 (31.82%), Postives = 60/110 (54.55%), Query Frame = 1
Query:  211 ILERHLGSSKYASFLVLAAVLTKSIE---LALCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLY 531
            ++ER  GS+KY +F+ ++ V+   +E   L L  Q      P GP +++ +    Y+  +P T    F +    +++K+F YV  L +AF  S+ +L+PA CGV+   LY
Sbjct:    1 VIERQYGSAKYMAFISISIVIATLLEVGALVLGAQIGLKSIPGGPYALIFSSLYQYHRIIPITYR--FRIFGVVMSDKLFLYVLALQMAFSQSYQTLIPALCGVLSGALY 108          
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: M7NMN8_PNEMU (UBA domain-containing protein n=3 Tax=Pneumocystis TaxID=4753 RepID=M7NMN8_PNEMU)

HSP 1 Score: 60.5 bits (145), Expect = 2.100e-7
Identity = 43/164 (26.22%), Postives = 77/164 (46.95%), Query Frame = 1
Query:  124 QWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIE-LALCIQFPYLRQ------PSGPLSILSALTTMYYGYVPCTTPIYF-----TLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQI 579
            Q+WR+        +  E++         RI+ERH G+ KYASF++L+ + T  +  L LC     L Q      P+GP +++ ++   Y+  +P +              F ++ K++ Y+    L F +S  S+L A  G ++  LY   + P   +R+P +I
Sbjct:   51 QYWRILGWQMIYINAGEVLFGTLTFYNLRIVERHFGARKYASFIILSFLYTSILTPLILCFIIKPLSQGRYQYLPAGPTALIFSILAQYHTIIPESYKFKVLNMPSAKKGFFLSNKIYLYILSFQLLFAESPGSILEAVTGWIIGRLYVFQYLPGVKWRIPKRI 214          
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Match: A0A507DHV5_9FUNG (UBA domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DHV5_9FUNG)

HSP 1 Score: 59.7 bits (143), Expect = 4.320e-7
Identity = 44/157 (28.03%), Postives = 81/157 (51.59%), Query Frame = 1
Query:  124 QWWRLFSSLFSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIE---LALCIQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYVAILSLAFHDSWDSLLPAGCGVMVALLYCPSFSP--LQSFRVPGQI 579
            Q+WRL S+  +  S  E++    L    R+LERH GS K+ASF+++++V++ +++   L L   F       GP + LSAL   +   +P T    F +    +T+K+F Y+    + +      L+P  CG +  ++     +P  ++ +R+P +I
Sbjct:   76 QFWRLASTHMAFTSSSEVLFGGILIYHMRLLERHWGSYKFASFILISSVVSTALDVMSLLLLSNFNITHVSPGPYAALSALAYNFVVDIPLTYR--FKVMGVTVTDKMFVYLLGGQMLWCSWPHCLIPIVCGWITGMILKSDVAPVYIKKWRIPKRI 230          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig101.86.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LPP7_ECTSI2.570e-7658.38Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L6R3_9PHAE4.570e-7658.38UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A1C7NLX4_9FUNG1.040e-1530.07DSC E3 ubiquitin ligase complex subunit 2 n=1 Tax=... [more]
A0A0W0FM30_9AGAR1.630e-929.81CUE domain-containing protein n=2 Tax=Moniliophtho... [more]
UPI001C7BA63F1.130e-827.33uncharacterized protein n=1 Tax=Marasmius oreades ... [more]
L0PB06_PNEJ81.300e-825.00UBA domain-containing protein n=3 Tax=Pneumocystis... [more]
A0A507C6J2_9FUNG2.430e-828.75UBA domain-containing protein n=1 Tax=Synchytrium ... [more]
A0A367KLM0_RHIST4.500e-831.82CUE domain-containing protein (Fragment) n=1 Tax=R... [more]
M7NMN8_PNEMU2.100e-726.22UBA domain-containing protein n=3 Tax=Pneumocystis... [more]
A0A507DHV5_9FUNG4.320e-728.03UBA domain-containing protein n=1 Tax=Synchytrium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig101contigH-paniculata_contig101:19939..21622 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score78.2
Seed ortholog evalue5.1e-12
Seed eggNOG ortholog2880.D7FMP5
Preferred nameUBAC2
KEGG koko:K01365
KEGG Pathwayko04140,ko04142,ko04145,ko04210,ko04612,ko05205,ko05323,ko05418,map04140,map04142,map04145,map04210,map04612,map05205,map05323,map05418
Hectar predicted targeting categorysignal peptide
GOsGO:0000139,GO:0000151,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0006355,GO:0006357,GO:0006508,GO:0006807,GO:0006950,GO:0006984,GO:0006991,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010559,GO:0010604,GO:0010605,GO:0010628,GO:0012505,GO:0016020,GO:0016021,GO:0016485,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0023052,GO:0030162,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031399,GO:0031625,GO:0031984,GO:0032182,GO:0032268,GO:0032269,GO:0032386,GO:0032387,GO:0032879,GO:0032880,GO:0032933,GO:0032991,GO:0033036,GO:0033157,GO:0033365,GO:0033554,GO:0034613,GO:0035103,GO:0042176,GO:0042177,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044695,GO:0045861,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051223,GO:0051224,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051604,GO:0051641,GO:0051716,GO:0060049,GO:0060255,GO:0060341,GO:0061136,GO:0065007,GO:0070201,GO:0070727,GO:0070861,GO:0070862,GO:0070972,GO:0071501,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090317,GO:0098588,GO:0098791,GO:0098796,GO:1900037,GO:1900039,GO:1901564,GO:1901799,GO:1902494,GO:1902680,GO:1903018,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903506,GO:1903508,GO:1903573,GO:1903827,GO:1903828,GO:1904152,GO:1904153,GO:1904292,GO:1904293,GO:1904950,GO:1905897,GO:1990234,GO:2000112,GO:2001141
EggNOG free text desc.Ubiquitin-associated domain-containing protein
EggNOG OGsKOG4463@1,KOG4463@2759
Ec32 ortholog descriptionPeptidase S54, rhomboid domain
Ec32 orthologEc-18_001990.1
EC3.4.22.15
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00537,ko01000,ko01002,ko03110
Exons5
Model size621
Cds size621
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig101.86.1prot_H-paniculata_contig101.86.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig101 19939..21622 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928716.8260646-CDS-H-paniculata_contig101:19938..200421622928716.8260646-CDS-H-paniculata_contig101:19938..20042Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 19939..20042 +
1691480591.5923994-CDS-H-paniculata_contig101:19938..200421691480591.5923994-CDS-H-paniculata_contig101:19938..20042Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 19939..20042 +
1622928716.8650408-CDS-H-paniculata_contig101:20349..204661622928716.8650408-CDS-H-paniculata_contig101:20349..20466Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 20350..20466 +
1691480591.6064572-CDS-H-paniculata_contig101:20349..204661691480591.6064572-CDS-H-paniculata_contig101:20349..20466Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 20350..20466 +
1622928716.878295-CDS-H-paniculata_contig101:20854..210061622928716.878295-CDS-H-paniculata_contig101:20854..21006Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 20855..21006 +
1691480591.614694-CDS-H-paniculata_contig101:20854..210061691480591.614694-CDS-H-paniculata_contig101:20854..21006Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 20855..21006 +
1622928716.8954585-CDS-H-paniculata_contig101:21212..213011622928716.8954585-CDS-H-paniculata_contig101:21212..21301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 21213..21301 +
1691480591.6258316-CDS-H-paniculata_contig101:21212..213011691480591.6258316-CDS-H-paniculata_contig101:21212..21301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 21213..21301 +
1622928716.905157-CDS-H-paniculata_contig101:21463..216221622928716.905157-CDS-H-paniculata_contig101:21463..21622Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 21464..21622 +
1691480591.6371822-CDS-H-paniculata_contig101:21463..216221691480591.6371822-CDS-H-paniculata_contig101:21463..21622Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 21464..21622 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig101.86.1

>prot_H-paniculata_contig101.86.1 ID=prot_H-paniculata_contig101.86.1|Name=mRNA_H-paniculata_contig101.86.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp
AGTPVSKTVCVLTTAVTLAVLSNKSQDAFSTSALRIFGEEKQWWRLFSSL
FSLASVWELMLTLHLARTFRILERHLGSSKYASFLVLAAVLTKSIELALC
IQFPYLRQPSGPLSILSALTTMYYGYVPCTTPIYFTLGDFRITEKVFTYV
AILSLAFHDSWDSLLPAGCGVMVALLYCPSFSPLQSFRVPGQILFSVSMI
VLWSFV*
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mRNA from alignment at H-paniculata_contig101:19939..21622+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig101.86.1 ID=mRNA_H-paniculata_contig101.86.1|Name=mRNA_H-paniculata_contig101.86.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1684bp|location=Sequence derived from alignment at H-paniculata_contig101:19939..21622+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAGGAACACCTGTGAGCAAGACTGTTTGCGTCTTGACGACTGCTGTGAC CTTGGCGGTTCTGTCCAACAAAAGCCAGGATGCCTTCTCCACGTCTGCGC TAAGGTATGCTGTATGTTTGCCGTTGGAGAAAGGACATCATGCTACAGTA TGGACCCGATGATAAGAAATTCTTATTTCGGGTGAGGCTCAAAACGTCAG TTTGGCGAGAATCACGAACATCACTGTTTTTCACTTGTATAAGGAATTGA TAGAGGACCACAATTTGACTCCCATTTCTTAGGCCGGACTTCTCATGGAT TGGCAAAAAGTGAGCTTCAATTTCTTACGATCGGGCCGGTGCTGTAGTCA GATTTGTCGTGTAAACTTTTGAATATCCTCACCTTCCGCGTCGGTCTCGT GTAAATCACAGGATATTTGGTGAAGAGAAACAATGGTGGCGCCTGTTTTC CAGCTTATTTTCTTTGGCGAGTGTGTGGGAATTGATGCTTACTCTGCATC TCGCCCGGACTTTCAGGATATTGGAGAGGTGATAACCGTTTCGTTGTTGT GTGATTTACAGGCAGTTTCAGTTGTTTTAGAGTTCTACGGTACTGTCCAT TTGTCTAATCCTTGCTGATGGATAACGTAACGACGATGATGATGTTCCTC TCGAAGCAAATTCCCCTCTCTGTCCAAGGTAATACAGAAGACTTTGTTCT CATTGGCGTAACTTTGGTCTGCCTTATAGGTTGTGAAACAAACCTGAAGA CAGTACAACGTCATACGGCAGGGCGGTGTGCTCTTCATGCATACCCACTC TGCAAATCCATTTTGCAGCAAGCGTCTCTTCCGTCATCTTGGGAACATCA CCCTGAGGTGATTTAACACCATGGATCTATTCCGTCTCCACAATTTGTTG CTGCTTGCTGCATCAGACATTTGGGCTCCTCAAAGTATGCATCCTTCTTG GTCTTGGCTGCCGTTCTCACCAAAAGCATCGAACTGGCTCTCTGCATCCA GTTTCCCTACCTTCGACAACCCTCAGGTCCACTTTCCATCTTGAGCGCCT TGACTACCATGTATTACGGTACGTGCGTTCTGACTGACCACCCTTGCTCA TTCGAACGTAGTTGAGCATTGTTCGAGATGCCACTCAAACAAAGCGTGCA CGGCATTGCACAACGCAGAGCATGATCCTTGCACGTGCCATTTGACCGCT GTCTGTGTAACTGTTTCATCTCGTACATTGTACTTTGCTCGGAGTTTAGC TCTTCCCATTCCGGTTTCGCACAGGTTATGTCCCATGTACTACACCCATC TACTTCACCTTGGGAGATTTCCGAATTACGGAGAAAGTCTTCACATACGT GGCAATTCTGTCGGTGAGTGGTTCATTTTGTAGTGTAGCCAAATTGAAGA ATCAAAGGGAATCCTGCGCATCCATGCCGAATGTGAACTGCACGCATCAT TTAGATTCGTTCGCTCAATCCTGGTCATATATGCCTGCTCTTCATAACAC CAGTGACTCATTTCTCCCACCGCAGCTGGCGTTCCACGACTCCTGGGACT CGCTATTGCCTGCTGGATGTGGTGTGATGGTGGCACTGCTGTACTGTCCT AGCTTCTCGCCCCTGCAGAGCTTTCGAGTGCCGGGACAGATACTTTTTTC GGTGAGTATGATTGTTTTGTGGAGTTTTGTATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig101:19939..21622+

>mRNA_H-paniculata_contig101.86.1 ID=mRNA_H-paniculata_contig101.86.1|Name=mRNA_H-paniculata_contig101.86.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at H-paniculata_contig101:19939..21622+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAGGAACACCTGTGAGCAAGACTGTTTGCGTCTTGACGACTGCTGTGAC
CTTGGCGGTTCTGTCCAACAAAAGCCAGGATGCCTTCTCCACGTCTGCGC
TAAGGCAGGAACACCTGTGAGCAAGACTGTTTGCGTCTTGACGACTGCTG
TGACCTTGGCGGTTCTGTCCAACAAAAGCCAGGATGCCTTCTCCACGTCT
GCGCTAAGGATATTTGGTGAAGAGAAACAATGGTGGCGCCTGTTTTCCAG
CTTATTTTCTTTGGCGAGTGTGTGGGAATTGATGCTTACTCTGCATCTCG
CCCGGACTTTCAGGATATTGGAGAGGATATTTGGTGAAGAGAAACAATGG
TGGCGCCTGTTTTCCAGCTTATTTTCTTTGGCGAGTGTGTGGGAATTGAT
GCTTACTCTGCATCTCGCCCGGACTTTCAGGATATTGGAGAGACATTTGG
GCTCCTCAAAGTATGCATCCTTCTTGGTCTTGGCTGCCGTTCTCACCAAA
AGCATCGAACTGGCTCTCTGCATCCAGTTTCCCTACCTTCGACAACCCTC
AGGTCCACTTTCCATCTTGAGCGCCTTGACTACCATGTATTACGACATTT
GGGCTCCTCAAAGTATGCATCCTTCTTGGTCTTGGCTGCCGTTCTCACCA
AAAGCATCGAACTGGCTCTCTGCATCCAGTTTCCCTACCTTCGACAACCC
TCAGGTCCACTTTCCATCTTGAGCGCCTTGACTACCATGTATTACGGTTA
TGTCCCATGTACTACACCCATCTACTTCACCTTGGGAGATTTCCGAATTA
CGGAGAAAGTCTTCACATACGTGGCAATTCTGTCGGTTATGTCCCATGTA
CTACACCCATCTACTTCACCTTGGGAGATTTCCGAATTACGGAGAAAGTC
TTCACATACGTGGCAATTCTGTCGCTGGCGTTCCACGACTCCTGGGACTC
GCTATTGCCTGCTGGATGTGGTGTGATGGTGGCACTGCTGTACTGTCCTA
GCTTCTCGCCCCTGCAGAGCTTTCGAGTGCCGGGACAGATACTTTTTTCG
GTGAGTATGATTGTTTTGTGGAGTTTTGTATGACTGGCGTTCCACGACTC
CTGGGACTCGCTATTGCCTGCTGGATGTGGTGTGATGGTGGCACTGCTGT
ACTGTCCTAGCTTCTCGCCCCTGCAGAGCTTTCGAGTGCCGGGACAGATA
CTTTTTTCGGTGAGTATGATTGTTTTGTGGAGTTTTGTATGA
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