mRNA_H-paniculata_contig101.85.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig101.85.1
Unique NamemRNA_H-paniculata_contig101.85.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig101.85.1 vs. uniprot
Match: A0A835ZFY6_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFY6_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 3.720e-139
Identity = 228/341 (66.86%), Postives = 271/341 (79.47%), Query Frame = 1
Query:  292 MIAIAKHGTAR---GVLGRCQLSIFRHASTLVVAEHDNVNLSPSSLSAVTAAGELKGGVTFLVLGHEAQAVAEQASKVAGVHKVLHIDDIAYGKWVAENITKAVASVQNAVSFTHVMALSTMAGKNFIGRLGAEFDCAPVTDVLKVMDENTFVRPMYAGNAVATVTASSPIKFLTVRPTAFEKAATSGGTASIQSMAAPHDGADARLASYVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADRLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYMAIGISGAIQHLSGMKDSKCIIAINKDKEAPIFQAADYGLVADLFEAVPELESKV 1305
            M+   +H + R    ++     S  R ASTLVVAEH+N  LSP +LSAVTAAG++ G V  LVLG  +  VAE ASKVAGV KVLH D  AY  ++AEN ++ V +   A  +THVMA+S+MAGKNFIGRLGAE D APVTDV+KV+DE+TF RPMYAGNA+ATVTAS P+K LTVRPTAF+KA  +GG+A++++   P +  +  L+ +VSESVS   RPDL AARVVVSGGRGMK+G+NF +LE LAD+LGGAVGASRAAVDAG+VPNELQVGQTGKVVAPELY+A+GISGAIQHLSGMKDSKCI+AINKDKEAPIF  ADYGLVADLF AVPEL  K+
Sbjct:    2 MLRAGRHASLRRCGALVSHAWSSNSRLASTLVVAEHNNKALSPGTLSAVTAAGKIGGEVHLLVLGSGSAPVAEAASKVAGVAKVLHGDHPAYAHFLAENTSRGVRASAEAHKYTHVMAISSMAGKNFIGRLGAEMDLAPVTDVIKVVDESTFERPMYAGNAIATVTASDPLKLLTVRPTAFDKAPATGGSAAVEAAPLPAE-PETGLSKFVSESVSSSARPDLGAARVVVSGGRGMKNGENFAMLEALADKLGGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFTVADYGLVADLFTAVPELTKKL 341          
BLAST of mRNA_H-paniculata_contig101.85.1 vs. uniprot
Match: A0A5D6Y5S8_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5S8_9STRA)

HSP 1 Score: 377 bits (967), Expect = 3.510e-123
Identity = 203/321 (63.24%), Postives = 251/321 (78.19%), Query Frame = 1
Query:  346 LSIFRHASTLVVAEHDNVNLSPSSLSAVTAAGELKGGVTFLVLGHEAQAVAEQASKVAGVHKVLHIDDIAYGKWVAENITKAVASVQNAVSFTHVMALSTMAGKNFIGRLGAEFDCAPVTDVLKVMDENTFVRPMYAGNAVATVTASSPIKFLTVRPTAFEKAATSGGTASIQ-SMAAPHDGADARLASYVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADRLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYMAIGISGAIQHLSGMKDSKCIIAINKDKEAPIFQAADYGLVADLFEAVPELESKV 1305
            LS  R  STLVVAEH+  +++  +LSAVTAA +L G VT LVLG +A  VA QA+K+AGV  VLH  D  Y   +AE +T+ + + Q A  +TH++A S+ A KN+I R+GA+ D AP++DVL V D++TF RPMYAGNA+A VT+S  +K LTVRPT FEKAA  GG+A++  +  AP  G  A    +VSE VS  +RPDLT+ARVV++GGRG+K GDNF++L KLAD+LGGAVGASRAAVDAG+VPNELQVGQTGKVVAPELY+A+GISGAIQHL+GMKDSK I+AINKD+EAPIFQ ADYGLVADLF AVPEL  K+
Sbjct:   16 LSSARSLSTLVVAEHNLKDVTGGTLSAVTAASQLGGDVTVLVLGSQAAGVAAQAAKIAGVSSVLHAADAKYDHLIAEEVTELLVAAQQANQYTHIVAPSSNASKNYIPRVGAKLDVAPISDVLAVADKDTFFRPMYAGNAIAKVTSSDAVKLLTVRPTGFEKAAAEGGSAAVSPAPEAPTVGKTA----FVSEEVSKSERPDLTSARVVIAGGRGLKSGDNFELLYKLADKLGGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVADLFTAVPELTEKI 332          
BLAST of mRNA_H-paniculata_contig101.85.1 vs. uniprot
Match: A0A067CIA0_SAPPC (Electron transfer flavoprotein subunit alpha n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CIA0_SAPPC)

HSP 1 Score: 376 bits (966), Expect = 4.330e-123
Identity = 203/321 (63.24%), Postives = 245/321 (76.32%), Query Frame = 1
Query:  343 QLSIFRHASTLVVAEHDNVNLSPSSLSAVTAAGELKGGVTFLVLGHEAQAVAEQASKVAGVHKVLHIDDIAYGKWVAENITKAVASVQNAVSFTHVMALSTMAGKNFIGRLGAEFDCAPVTDVLKVMDENTFVRPMYAGNAVATVTASSPIKFLTVRPTAFEKAATSGGTASIQSMAAPHDGADARLASYVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADRLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYMAIGISGAIQHLSGMKDSKCIIAINKDKEAPIFQAADYGLVADLFEAVPELESKV 1305
            +LS  R ASTLVVAEH    L+  +LSA+TAA ++ G +T LV G    AVA++A+ V GV  VLH D   Y   +AE +T  VA+VQ A SF+H++A S+   KNF+ RLGA  D AP+TDVL V+DE TF RPMYAGNA+ATVT+S  +K +T+RPT FEKAA +GG+AS+   AAP   A A L  +VSE  S  DRPDL +ARVVVSGGRGMK G+NF++L  LAD+L GAVGASRAAVDAGFVPNELQVGQTGKVVAPELY+A+GISGAIQHL+GMKDSK I+AINKD EAPIFQ +DYG+V DLF+ VPEL  K+
Sbjct:   11 KLSAARFASTLVVAEHAGQKLTGGTLSAITAASKIGGDITVLVSGSNTAAVAQEAAAVQGVKAVLHADSAQYDHAIAEEVTNLVAAVQAASSFSHILAPSSNISKNFVPRLGATLDVAPLTDVLAVVDETTFQRPMYAGNAIATVTSSDAVKLMTIRPTGFEKAAATGGSASVS--AAP-TAAPANLTKFVSEETSSSDRPDLASARVVVSGGRGMKSGENFEMLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVSDYGVVDDLFKVVPELTEKI 328          
BLAST of mRNA_H-paniculata_contig101.85.1 vs. uniprot
Match: A0A2D4CIU3_PYTIN (Electron transfer flavoprotein subunit alpha n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIU3_PYTIN)

HSP 1 Score: 374 bits (959), Expect = 4.720e-122
Identity = 196/319 (61.44%), Postives = 250/319 (78.37%), Query Frame = 1
Query:  349 SIFRHASTLVVAEHDNVNLSPSSLSAVTAAGELKGGVTFLVLGHEAQAVAEQASKVAGVHKVLHIDDIAYGKWVAENITKAVASVQNAVSFTHVMALSTMAGKNFIGRLGAEFDCAPVTDVLKVMDENTFVRPMYAGNAVATVTASSPIKFLTVRPTAFEKAATSGGTASIQSMAAPHDGADARLASYVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADRLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYMAIGISGAIQHLSGMKDSKCIIAINKDKEAPIFQAADYGLVADLFEAVPELESKV 1305
            ++ R  STLV+AEH+   +S S+LSAVTAA ++ G VT LVLG +A AVA+ A+K+AGV  VLH  D  Y   +AE++T+ + + Q   SF+H++A S+ A KN++ RLGA+ D AP++D++ V D++TF+RP YAGNA+A V +   +K +TVRPT FEKAA  GG A++   AAP   A  + + +VSE VS  +RPDLTAARVV+SGGRG+K G+NF +L KLAD+LGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELY+A+GISGAIQHL+GMKDSK I+AINKD+EAPIFQ +DYGLVADLF AVPEL  K+
Sbjct:   12 TVNRSFSTLVIAEHNQKEVSGSTLSAVTAASKIGGDVTLLVLGSQADAVAQSAAKIAGVSNVLHAKDAKYDHLLAEDVTELLVATQKEKSFSHILAPSSNASKNYLPRLGAKLDTAPISDIIAVADKDTFLRPTYAGNAIAQVKSKDAVKIITVRPTGFEKAAAEGGNAAVA--AAPEAAATGK-SQFVSEEVSKSERPDLTAARVVISGGRGLKSGENFDMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVSDYGLVADLFTAVPELTEKI 327          
BLAST of mRNA_H-paniculata_contig101.85.1 vs. uniprot
Match: A0A6G0XJ74_9STRA (Electron transfer flavoprotein subunit alpha n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJ74_9STRA)

HSP 1 Score: 371 bits (952), Expect = 5.500e-121
Identity = 202/317 (63.72%), Postives = 242/317 (76.34%), Query Frame = 1
Query:  358 RHASTLVVAEHDNVNLSPSSLSAVTAAGELKGGVTFLVLGHEAQAVAEQASKVAGVHKVLHIDDIAYGKWVAENITKAVASVQNAVSFTHVMALSTMAGKNFIGRLGAEFDCAPVTDVLKVMDENTFVRPMYAGNAVATVTASSPIKFLTVRPTAFEKAATSGGTASIQSM-AAPHDGADARLASYVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADRLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYMAIGISGAIQHLSGMKDSKCIIAINKDKEAPIFQAADYGLVADLFEAVPELESKV 1305
            R ASTLVVAEH+  +L+  +LSA+TAA ++ G VT LV G  +  VA+ A+ V GV  VLH D   +   +AE IT  V +VQ A +FTH++A S+   KNF+ R+GA  D +P TDVL V+DENTF RPMYAGNA+ATVT+S  +K LTVRPT F+KAAT+GG  ++ +  AAP  G    L+ +VSE  S  DRPDLT+ARVVVSGGRGMK G+NF +L  LAD+L GAVGASRAAVDAGFVPNELQVGQTGKVVAPELY+A+GISGAIQHL+GMKDSK I+AINKD EAPIFQ ADYGLV DLF AVPEL  K+
Sbjct:   16 RFASTLVVAEHNGESLTGGTLSAITAASKIGGDVTVLVAGSNSANVAQAAASVQGVKSVLHADAAQFDHSLAEEITSLVVTVQKASNFTHIVAPSSNISKNFLPRVGAALDVSPFTDVLAVVDENTFQRPMYAGNAIATVTSSDAVKLLTVRPTGFDKAATTGGAGAVSAAPAAPVAG----LSRFVSEETSSSDRPDLTSARVVVSGGRGMKSGENFALLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDGEAPIFQVADYGLVEDLFNAVPELTEKI 328          
BLAST of mRNA_H-paniculata_contig101.85.1 vs. uniprot
Match: A0A485KD61_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KD61_9STRA)

HSP 1 Score: 370 bits (949), Expect = 1.610e-120
Identity = 202/317 (63.72%), Postives = 240/317 (75.71%), Query Frame = 1
Query:  358 RHASTLVVAEHDNVNLSPSSLSAVTAAGELKGGVTFLVLGHEAQAVAEQASKVAGVHKVLHIDDIAYGKWVAENITKAVASVQNAVSFTHVMALSTMAGKNFIGRLGAEFDCAPVTDVLKVMDENTFVRPMYAGNAVATVTASSPIKFLTVRPTAFEKAATSGGTASIQSM-AAPHDGADARLASYVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADRLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYMAIGISGAIQHLSGMKDSKCIIAINKDKEAPIFQAADYGLVADLFEAVPELESKV 1305
            R ASTLVVAEH    L+  +LSA+TAA ++ G VT LV G     VA++A+ V GV  VLH D   +   +AE +T  V ++Q A SF+H++A S+   KNF+ R+GA  D AP TDVL V+DENTF RPMYAGNA+ATVT+S  +K LTVRPT FEKA  +GG+AS+ +  AAP  G    L S+VSE  S  DRPDLT+ARVVVSGGRGMK G+NF +L  LAD+L GAVGASRAAVDAGFVPNELQVGQTGKVVAPELY+A+GISGAIQHL+GMKDSK I+AINKD EAPIFQ ADYGLV DLF+ VPEL  K+
Sbjct:   17 RFASTLVVAEHAGQKLTGGTLSAITAASKIGGDVTVLVAGSNTADVAKEAAAVQGVKSVLHADAAQFDHAIAEELTSLVVTIQQASSFSHIVAPSSNISKNFLPRVGAALDVAPFTDVLAVVDENTFQRPMYAGNAIATVTSSDTVKLLTVRPTGFEKANATGGSASVTAAPAAPAAG----LTSFVSEETSSSDRPDLTSARVVVSGGRGMKSGENFGLLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVADYGLVDDLFKVVPELTEKI 329          
BLAST of mRNA_H-paniculata_contig101.85.1 vs. uniprot
Match: K3WS82_GLOUD (Electron transfer flavoprotein subunit alpha n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS82_GLOUD)

HSP 1 Score: 367 bits (943), Expect = 1.280e-119
Identity = 193/316 (61.08%), Postives = 246/316 (77.85%), Query Frame = 1
Query:  358 RHASTLVVAEHDNVNLSPSSLSAVTAAGELKGGVTFLVLGHEAQAVAEQASKVAGVHKVLHIDDIAYGKWVAENITKAVASVQNAVSFTHVMALSTMAGKNFIGRLGAEFDCAPVTDVLKVMDENTFVRPMYAGNAVATVTASSPIKFLTVRPTAFEKAATSGGTASIQSMAAPHDGADARLASYVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADRLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYMAIGISGAIQHLSGMKDSKCIIAINKDKEAPIFQAADYGLVADLFEAVPELESKV 1305
            R  STLVVAEH+  +++  +LSAVTAA ++ G VT LVLG +A  +A+QA+K+AGV  VLH  D  Y   +AE +T+ + + Q   +FTH++A S+ A KN++ R+GA+ D AP++D+L V D++TF+RP YAGNA+A + +   +K +TVRPT FEKAAT GG+AS+    AP + A      +VSE VS  DRPDLT+ARVVVSGGRG+K G+NF++L KLAD+L GAVGASRAAVDAG+VPNELQVGQTGKVVAPELY+A GISGAIQHL+GMKDSK I+AINKD+EAPIFQ +DYGLVADLF AVPEL  K+
Sbjct:   17 RSLSTLVVAEHNQKDVTGGTLSAVTAATKIGGDVTVLVLGSQAAGIADQAAKIAGVSSVLHAADAKYDHLIAEEVTELLVAAQKEKNFTHILAPSSNASKNYLPRVGAKLDVAPISDILAVADKDTFLRPTYAGNAIAQIKSKDAVKLITVRPTGFEKAATEGGSASVSP--AP-EAATVGKTQFVSEEVSKSDRPDLTSARVVVSGGRGLKSGENFEMLYKLADKLNGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYIAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVSDYGLVADLFTAVPELTEKI 329          
BLAST of mRNA_H-paniculata_contig101.85.1 vs. uniprot
Match: A0A8K1FT05_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FT05_PYTOL)

HSP 1 Score: 363 bits (933), Expect = 3.800e-118
Identity = 190/316 (60.13%), Postives = 246/316 (77.85%), Query Frame = 1
Query:  358 RHASTLVVAEHDNVNLSPSSLSAVTAAGELKGGVTFLVLGHEAQAVAEQASKVAGVHKVLHIDDIAYGKWVAENITKAVASVQNAVSFTHVMALSTMAGKNFIGRLGAEFDCAPVTDVLKVMDENTFVRPMYAGNAVATVTASSPIKFLTVRPTAFEKAATSGGTASIQSMAAPHDGADARLASYVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADRLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYMAIGISGAIQHLSGMKDSKCIIAINKDKEAPIFQAADYGLVADLFEAVPELESKV 1305
            R  STLV+AEH+   ++  +LS +TAA ++   VT LV+G +A+ VA+ A+K+AGV  VLH  D  +   +AE++T+ + + Q   +F+H++A S+ A KN++ RLGA+ D AP++D++ V D++TFVRP YAGNA+A V +S  +K +TVRPT FEKAA  GG+AS+   AAP + A A    +VSE VS  +RPDL +ARVV+SGGRG+K G+NF++L KLAD+LGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELY+A GISGAIQHL+GMKDSK I+AINKD+EAPIFQ ADYGLVADLF AVPEL  K+
Sbjct:   15 RSFSTLVIAEHNQKEVTGGTLSTITAASKIGNDVTLLVIGSQAEGVAQAAAKIAGVSNVLHAKDAKFDHLIAEDVTELLLATQKEKNFSHILAPSSNASKNYLPRLGAKLDSAPISDIIAVADKDTFVRPTYAGNAIAQVKSSDAVKLITVRPTGFEKAAVEGGSASVS--AAP-EAAAAGKTQFVSEEVSKSERPDLGSARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVADLFTAVPELTEKI 327          
BLAST of mRNA_H-paniculata_contig101.85.1 vs. uniprot
Match: A0A024TEE9_9STRA (Electron transfer flavoprotein subunit alpha n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TEE9_9STRA)

HSP 1 Score: 362 bits (928), Expect = 3.690e-117
Identity = 192/316 (60.76%), Postives = 236/316 (74.68%), Query Frame = 1
Query:  358 RHASTLVVAEHDNVNLSPSSLSAVTAAGELKGGVTFLVLGHEAQAVAEQASKVAGVHKVLHIDDIAYGKWVAENITKAVASVQNAVSFTHVMALSTMAGKNFIGRLGAEFDCAPVTDVLKVMDENTFVRPMYAGNAVATVTASSPIKFLTVRPTAFEKAATSGGTASIQSMAAPHDGADARLASYVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADRLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYMAIGISGAIQHLSGMKDSKCIIAINKDKEAPIFQAADYGLVADLFEAVPELESKV 1305
            R ASTLVVAEH+   L+  +LSA+TAA ++ G +T LV G    ++A++A+ V GV  VLH D   +   +AE ++  V ++Q   +F+H++A S+   KNF+ R+GA  D AP TDVL V+DENTF RP+YAGNA+ATVT+S  +K LTVRPT FEKAAT+GGT              A L  +VSE  S  +RPDLTAARVVVSGGRG+K G+NF +L  LAD+L GAVGASRAAVDAGFVPNELQ+GQTGKVVAPELY+A+GISGAIQHL+GMKDSK I+AINKD EAPIFQ ADYGLV DLF+AVPEL  K+
Sbjct:   31 RFASTLVVAEHNGETLTGGTLSAITAASKIGGDITVLVSGSNTASIAKEAAAVQGVKAVLHADAAQFDHAIAEELSSLVVTIQKGSNFSHIVAPSSNISKNFLPRVGAALDVAPFTDVLSVVDENTFQRPLYAGNAIATVTSSDSVKLLTVRPTGFEKAATTGGTXXXXXXXXXXX---ANLTRFVSEETSSSERPDLTAARVVVSGGRGLKSGENFALLNTLADKLKGAVGASRAAVDAGFVPNELQIGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVADYGLVEDLFKAVPELTEKI 343          
BLAST of mRNA_H-paniculata_contig101.85.1 vs. uniprot
Match: H3HBC2_PHYRM (Electron transfer flavoprotein subunit alpha n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3HBC2_PHYRM)

HSP 1 Score: 356 bits (914), Expect = 3.000e-115
Identity = 191/314 (60.83%), Postives = 237/314 (75.48%), Query Frame = 1
Query:  367 STLVVAEHDNVNLSPSSLSAVTAAGELKGGVTFLVLGHEAQAVAEQASKVAGVHKVLHIDDIAYGKWVAENITKAVASVQNAVSFTHVMALSTMAGKNFIGRLGAEFDCAPVTDVLKVMDENTFVRPMYAGNAVATVTASSPIKFLTVRPTAFEKAATSGGTASIQ-SMAAPHDGADARLASYVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADRLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYMAIGISGAIQHLSGMKDSKCIIAINKDKEAPIFQAADYGLVADLFEAVPELESKV 1305
            STLVVAEH+   +S ++L+ VTAA ++ G +T LVLG +A   AE  +KVAGV  VLH  D  Y  +VAE + + + + Q A  ++HV+A S+ A KN++ R GA+ D AP++D+L V D++TF RP YAGNA+A V +   +K +TVRPT FEKAA  GG AS+  +  AP  G      S+VSE VS  +RPDL +ARVV+SGGRG+K G+NF++L KLAD+LGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELY+A GISGAIQHL+GMKDSK I+AINKD+EAPIFQ ADYGLV DLF AVPEL  KV
Sbjct:   21 STLVVAEHNQSQISGATLATVTAATQIGGDITLLVLGSQAGPAAEAGAKVAGVKNVLHAADAKYDHYVAEEVAELLVAAQTAGQYSHVLAPSSNASKNYLPRAGAKLDVAPISDILAVADKDTFFRPTYAGNAIAQVKSKDAVKLITVRPTGFEKAAAEGGNASVSPAPEAPTVG----KTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFELLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTEKV 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig101.85.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFY6_9STRA3.720e-13966.86Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A5D6Y5S8_9STRA3.510e-12363.24Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A067CIA0_SAPPC4.330e-12363.24Electron transfer flavoprotein subunit alpha n=4 T... [more]
A0A2D4CIU3_PYTIN4.720e-12261.44Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A6G0XJ74_9STRA5.500e-12163.72Electron transfer flavoprotein subunit alpha n=2 T... [more]
A0A485KD61_9STRA1.610e-12063.72Electron transfer flavoprotein subunit alpha n=1 T... [more]
K3WS82_GLOUD1.280e-11961.08Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A8K1FT05_PYTOL3.800e-11860.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TEE9_9STRA3.690e-11760.76Electron transfer flavoprotein subunit alpha n=4 T... [more]
H3HBC2_PHYRM3.000e-11560.83Electron transfer flavoprotein subunit alpha n=23 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig101contigH-paniculata_contig101:14007..16912 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score380.6
Seed ortholog evalue7.8e-103
Seed eggNOG ortholog112098.XP_008614384.1
Preferred nameETFA
KEGG koko:K03522
Hectar predicted targeting categorymitochondrion
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046872,GO:0046914,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575
EggNOG free text desc.fatty acid beta-oxidation using acyl-CoA dehydrogenase
EggNOG OGsCOG2025@1,KOG3954@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147
Exons4
Model size1892
Cds size1017
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig101.85.1prot_H-paniculata_contig101.85.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig101 14591..16621 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928716.6983833-UTR-H-paniculata_contig101:14006..145901622928716.6983833-UTR-H-paniculata_contig101:14006..14590Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig101 14007..14590 -
1691480591.5320868-UTR-H-paniculata_contig101:14006..145901691480591.5320868-UTR-H-paniculata_contig101:14006..14590Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig101 14007..14590 -
1622928716.7706673-UTR-H-paniculata_contig101:16621..169121622928716.7706673-UTR-H-paniculata_contig101:16621..16912Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig101 16622..16912 -
1691480591.5836568-UTR-H-paniculata_contig101:16621..169121691480591.5836568-UTR-H-paniculata_contig101:16621..16912Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig101 16622..16912 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928716.7148013-CDS-H-paniculata_contig101:14590..147971622928716.7148013-CDS-H-paniculata_contig101:14590..14797Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 14591..14797 -
1691480591.5450866-CDS-H-paniculata_contig101:14590..147971691480591.5450866-CDS-H-paniculata_contig101:14590..14797Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 14591..14797 -
1622928716.7267213-CDS-H-paniculata_contig101:15207..157021622928716.7267213-CDS-H-paniculata_contig101:15207..15702Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 15208..15702 -
1691480591.5543394-CDS-H-paniculata_contig101:15207..157021691480591.5543394-CDS-H-paniculata_contig101:15207..15702Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 15208..15702 -
1622928716.7385645-CDS-H-paniculata_contig101:15989..160911622928716.7385645-CDS-H-paniculata_contig101:15989..16091Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 15990..16091 -
1691480591.564289-CDS-H-paniculata_contig101:15989..160911691480591.564289-CDS-H-paniculata_contig101:15989..16091Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 15990..16091 -
1622928716.7569728-CDS-H-paniculata_contig101:16408..166211622928716.7569728-CDS-H-paniculata_contig101:16408..16621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 16409..16621 -
1691480591.5731633-CDS-H-paniculata_contig101:16408..166211691480591.5731633-CDS-H-paniculata_contig101:16408..16621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig101 16409..16621 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig101.85.1

>prot_H-paniculata_contig101.85.1 ID=prot_H-paniculata_contig101.85.1|Name=mRNA_H-paniculata_contig101.85.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=339bp
MIAIAKHGTARGVLGRCQLSIFRHASTLVVAEHDNVNLSPSSLSAVTAAG
ELKGGVTFLVLGHEAQAVAEQASKVAGVHKVLHIDDIAYGKWVAENITKA
VASVQNAVSFTHVMALSTMAGKNFIGRLGAEFDCAPVTDVLKVMDENTFV
RPMYAGNAVATVTASSPIKFLTVRPTAFEKAATSGGTASIQSMAAPHDGA
DARLASYVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADRLG
GAVGASRAAVDAGFVPNELQVGQTGKVVAPELYMAIGISGAIQHLSGMKD
SKCIIAINKDKEAPIFQAADYGLVADLFEAVPELESKV*
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mRNA from alignment at H-paniculata_contig101:14007..16912-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig101.85.1 ID=mRNA_H-paniculata_contig101.85.1|Name=mRNA_H-paniculata_contig101.85.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2906bp|location=Sequence derived from alignment at H-paniculata_contig101:14007..16912- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTACACCACCCGACTCTCTCTATTTATGCCCCTCGTATTGATTCTCAGG GGGAGTGAACTGAGACCGCGGTGCCTAAGTGGAAGTACATGAATAAAAGA GAAAAATCAACACCGCTCGAAATCGTTTCTGTTTGCTGCATTCAGCATTG TCATCAACTTGGAACAAGATTGCCGTCTCACCCGTCACAAGTGCTCCATT GTTGAAGATTGCCTGTCACGGCAGGAGGTCGAGAGGTGTCTGATAGCACA CGGGGACGAGGCCTGAGGTCAAGGCTATTGAACTTTTAGATATGATTGCT ATCGCTAAACACGGAACAGCGAGGGGTGTCCTTGGACGATGCCAGCTCTC TATTTTTCGTCACGCGTCGACCCTTGTTGTTGCTGAACACGACAACGTGA ATCTTAGTCCCAGCTCCCTGAGTGCGGTAACCGCTGCAGGAGAGCTCAAG GGGGGTGTAACGTTCCTGGTGCTGGGCCATGAGGCACAAGCTGTAGCGGA ACAGGTAATGCACTCTCTGATTAACTCCAACCTATTGCACCAAGCTCTCA AAGTTTGTTTGGGAACAATTTTTTGTGAGTTGAAGTTTAAGTGCTGTCGT TAAGTACAACTTGCAAAATGTACACGTTCCTCTGTCTGTCGATGACTAAC TGAATGTAGATGCGATGCGCCGTAATCCGCCACAGCGGCACCCGCAATAC TCAACGGGTACAGTATGATGCGGCAGGAAAAATGAGCAAAATTTGCGTCA CAGCAGTGCAACTATAACCGAGCTGCGTCCATCACTATTGTTCACTCCAT GTTTGCTTCTCCGATTCGCAGGCCTCCAAAGTTGCTGGAGTTCACAAGGT CTTGCATATTGATGACATAGCTTACGGCAAATGGGTTGCGGAAAACATTA CCAAAGCAGTCGCTTCTGTTCAGGTGCGAATGTGTACTTGATCCATATGG AAATGAGGGGATATCAATGGTAAAATGGTAAGCACCCCGCTGCAAATCAC CAATCAAATCATCACGTTCCTATTGCAATAGCAAGAAGATAGTTACGGTG TGCCATTGCGACAGTGAGCCGGATTGAGAAGCATTTCTGACGCTTGTGGC GAATTGCAGTGCGAAGCAGGAGCAACCTGAGGATTTCTTCTGTATTCCTC AGAAGTCTGAACCTTACCTCATTTCCGTTTGTATTACTTCTCCTTTCTCT TTCCCGTCAGAACGCTGTGTCTTTCACACATGTTATGGCCCTGTCAACCA TGGCGGGGAAAAACTTCATTGGTCGACTGGGGGCAGAGTTCGATTGCGCA CCAGTGACGGATGTATTAAAAGTGATGGACGAAAATACGTTCGTGAGACC GATGTATGCTGGTAACGCGGTGGCGACAGTTACAGCTTCGAGCCCCATCA AGTTTCTGACCGTGCGCCCCACTGCATTTGAAAAAGCAGCAACTAGCGGA GGCACAGCTTCTATCCAATCCATGGCTGCGCCGCATGATGGTGCGGACGC GAGACTGGCATCTTATGTCTCCGAGTCTGTCAGCGGAGGAGACAGACCAG ACCTGACAGCAGCGCGCGTTGTGGTATCTGGAGGTCGAGGGATGAAGGAT GGTGATAACTTCAAAATTCTGGAGAAATTGGCGGATAGATTGGGGGGTGC AGTTGGGGCGTCAAGAGCTGCTGTTGATGCGGGCTTTGTGCCGAATGAAT TACAGGTAACGCGGCAAGGTGGTGTTGTGGTGTTATGTGGAGTATTACGA AGTCCTCTCGAAAATCTTAGAGAATGTATCACGACTACCCTACGAGTAAT CTCTATAGCGCCAGTTGCACTCCTGCGGACGTTCTTTGGCGTGGGGAATA CTGACATGTTGAGACGTTCGGTTTAAGCACATATATACCGGCACCTTGGA GCTTCAGAATTTTGTCACGAATCTTTGATATTTGCCCGATGCGACTTGCC CCAGATATGACCAAAATAATCCCCCCAAACGAGCTGTATCCCCATCTATT CCCACAGAACTTCCGCACTACCTGACGCCATTGTGGTAGGTTTTCGCTCA GTTTGCACTTTGCAGAAGAGTGACTGATACGGCACGTCCCCTCTCGCATC ATGCCTCTTGTTCAGGTTGGTCAAACGGGCAAGGTGGTGGCACCTGAATT GTACATGGCCATTGGGATTTCTGGGGCGATCCAACACCTGTCCGGAATGA AGGATAGCAAGTGTATCATTGCCATCAATAAGGACAAAGAGGCCCCGATT TTCCAGGCGGCTGATTATGGGTTGGTTGCTGATCTATTCGAAGCTGTGCC TGAGTTGGAGTCGAAGGTGTAACGTTCGGTATGTTATGGAATGCAAAGTA TCTTAGGCTTGTGCATTGTTTGATCGAGCGGAGGCCGGAGACGGATAAGT TTTTGCAATTGATGCACCTACAACGTACGAGAGAAAGGGAAAAGATGCCC AGACAGCCCAGACGAATACATGCTGGTAAATGGAAACGTGTTTGGCTCTC GTATTTTTATGTTTCATTTTTGTGGCCTGTGGTATGCAAGGTCCACCTGA GAGTTTCGTCACGTACTGCCGTCACAAGGTGGCAATGCTGTTTTTGCTTC ACATTTCTTTTCCATGTAACTGTGTACTAGAAGTTCAGCATGATTTTTTC TTTAGGATGAAAAAAATTCAGTTATAATTTGTGCAGTATATCCCGTGCCA AAAACCTTGTAAGCTTTGAAATGTTCTTCTCTCCTACAGGGATAGAATGC GTCCACTTTCGATGAAATTGTGATCAGGGATTTCAAGATATCGGGCTAAA CAGAAAAACCAAGAAGAACCGTGAACGGCTATTAGTTTCTTGCTTTGAAT GCCCATATGTCTGGAGCAGGGAGCAGAGGACCTAATATGAAAAACTCCAA CACCCG
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Coding sequence (CDS) from alignment at H-paniculata_contig101:14007..16912-

>mRNA_H-paniculata_contig101.85.1 ID=mRNA_H-paniculata_contig101.85.1|Name=mRNA_H-paniculata_contig101.85.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2034bp|location=Sequence derived from alignment at H-paniculata_contig101:14007..16912- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATTGCTATCGCTAAACACGGAACAGCGAGGGGTGTCCTTGGACGATG
CCAGCTCTCTATTTTTCGTCACGCGTCGACCCTTGTTGTTGCTGAACACG
ACAACGTGAATCTTAGTCCCAGCTCCCTGAGTGCGGTAACCGCTGCAGGA
GAGCTCAAGGGGGGTGTAACGTTCCTGGTGCTGGGCCATGAGGCACAAGC
TGTAGCGGAACAGATGATTGCTATCGCTAAACACGGAACAGCGAGGGGTG
TCCTTGGACGATGCCAGCTCTCTATTTTTCGTCACGCGTCGACCCTTGTT
GTTGCTGAACACGACAACGTGAATCTTAGTCCCAGCTCCCTGAGTGCGGT
AACCGCTGCAGGAGAGCTCAAGGGGGGTGTAACGTTCCTGGTGCTGGGCC
ATGAGGCACAAGCTGTAGCGGAACAGGCCTCCAAAGTTGCTGGAGTTCAC
AAGGTCTTGCATATTGATGACATAGCTTACGGCAAATGGGTTGCGGAAAA
CATTACCAAAGCAGTCGCTTCTGTTCAGGCCTCCAAAGTTGCTGGAGTTC
ACAAGGTCTTGCATATTGATGACATAGCTTACGGCAAATGGGTTGCGGAA
AACATTACCAAAGCAGTCGCTTCTGTTCAGAACGCTGTGTCTTTCACACA
TGTTATGGCCCTGTCAACCATGGCGGGGAAAAACTTCATTGGTCGACTGG
GGGCAGAGTTCGATTGCGCACCAGTGACGGATGTATTAAAAGTGATGGAC
GAAAATACGTTCGTGAGACCGATGTATGCTGGTAACGCGGTGGCGACAGT
TACAGCTTCGAGCCCCATCAAGTTTCTGACCGTGCGCCCCACTGCATTTG
AAAAAGCAGCAACTAGCGGAGGCACAGCTTCTATCCAATCCATGGCTGCG
CCGCATGATGGTGCGGACGCGAGACTGGCATCTTATGTCTCCGAGTCTGT
CAGCGGAGGAGACAGACCAGACCTGACAGCAGCGCGCGTTGTGGTATCTG
GAGGTCGAGGGATGAAGGATGGTGATAACTTCAAAATTCTGGAGAAATTG
GCGGATAGATTGGGGGGTGCAGTTGGGGCGTCAAGAGCTGCTGTTGATGC
GGGCTTTGTGCCGAATGAATTACAGAACGCTGTGTCTTTCACACATGTTA
TGGCCCTGTCAACCATGGCGGGGAAAAACTTCATTGGTCGACTGGGGGCA
GAGTTCGATTGCGCACCAGTGACGGATGTATTAAAAGTGATGGACGAAAA
TACGTTCGTGAGACCGATGTATGCTGGTAACGCGGTGGCGACAGTTACAG
CTTCGAGCCCCATCAAGTTTCTGACCGTGCGCCCCACTGCATTTGAAAAA
GCAGCAACTAGCGGAGGCACAGCTTCTATCCAATCCATGGCTGCGCCGCA
TGATGGTGCGGACGCGAGACTGGCATCTTATGTCTCCGAGTCTGTCAGCG
GAGGAGACAGACCAGACCTGACAGCAGCGCGCGTTGTGGTATCTGGAGGT
CGAGGGATGAAGGATGGTGATAACTTCAAAATTCTGGAGAAATTGGCGGA
TAGATTGGGGGGTGCAGTTGGGGCGTCAAGAGCTGCTGTTGATGCGGGCT
TTGTGCCGAATGAATTACAGGTTGGTCAAACGGGCAAGGTGGTGGCACCT
GAATTGTACATGGCCATTGGGATTTCTGGGGCGATCCAACACCTGTCCGG
AATGAAGGATAGCAAGTGTATCATTGCCATCAATAAGGACAAAGAGGCCC
CGATTTTCCAGGCGGCTGATTATGGGTTGGTTGCTGATCTATTCGAAGCT
GTGCCTGAGTTGGAGTCGAAGGTGTAAGTTGGTCAAACGGGCAAGGTGGT
GGCACCTGAATTGTACATGGCCATTGGGATTTCTGGGGCGATCCAACACC
TGTCCGGAATGAAGGATAGCAAGTGTATCATTGCCATCAATAAGGACAAA
GAGGCCCCGATTTTCCAGGCGGCTGATTATGGGTTGGTTGCTGATCTATT
CGAAGCTGTGCCTGAGTTGGAGTCGAAGGTGTAA
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