mRNA_H-paniculata_contig10096.80.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: D7G6K5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K5_ECTSI) HSP 1 Score: 261 bits (666), Expect = 4.830e-76 Identity = 138/303 (45.54%), Postives = 191/303 (63.04%), Query Frame = 1 Query: 1 FQGIVLSGFDGACPRMRCMSCPRTVPEKAWGALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIES--------QSNDAEECSTKLSAESV--------SALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDV-ARCVSPGTAKNPQARMTDVLL----CIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKELEAADVFCAAHPSNPGRAAAEILRR 846 F GIV +GFDGACPRMRCM CPR V E W LV VL+ F+ RAATLLSIQCG CHSRG IMV PPA H YS A++ L + I S + A +T+ S ++ +++ + NA L+ FR +LERY +G+ ++ Y + A +PG + Q ++++ C+EDSERRA+L++RF++ + +V+++CC+ C+ CR H TCEQ EA RG +V CPGCGVY+VKGDGCD+I+C+CG +F+W EL+ A+ AD F AHP + GRAAA+I+RR Sbjct: 107 FTGIVEAGFDGACPRMRCMCCPRVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPADHCYSSALDKLMAMIASGLAPATPPSATTATAITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGIGQAAQESRDELMVLLMSCVEDSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAFRDAHPEDTGRAAAQIIRR 409
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A6H5JAV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV0_9PHAE) HSP 1 Score: 158 bits (399), Expect = 5.360e-40 Identity = 78/176 (44.32%), Postives = 111/176 (63.07%), Query Frame = 1 Query: 334 NAAELKEFRRALERYSAGNGLEVPEFYEDV-ARCVSPGTAKNPQARMTDVLL----CIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKELEAADVFCAAHPSNPGRAAAEILRR 846 NA ++ FR +LERY AG ++ Y + A +PG + Q ++++ C+ DSERR +L++RF++ + +V++RC + C+ CR H TCEQ EA RG +V CPGCGVY+VKGDGCD+I+CVCG FNW EL+ A+ D F AHP + GRAAA+I+RR Sbjct: 48 NAQRMERFRDSLERYIAGYEIDPSPCYIALEAAIANPGIGQAAQESRDELMVLLLSCVVDSERRENLHIRFIRSNPMVVTRCYKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCVCGHCFNWSELVAARHRRIVDAFRDAHPEDTGRAAAQIIRR 223
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A7S3XSF2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSF2_HETAK) HSP 1 Score: 147 bits (371), Expect = 1.450e-38 Identity = 92/261 (35.25%), Postives = 128/261 (49.04%), Query Frame = 1 Query: 1 FQGIVLSGFDGACPRMRCMSC-PRTVPEKAWGALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDVARCV-SPGTAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQK----EAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEA 765 F+ + SG+DG +M C +C R+VP WG + + + ++ RAA LL++QC CH R I+ D +E L + A +E ER++ G + E YE ++ S NP M +L I D RA LYLR+L+ + V + CCE QCFRCRT D HDGMTCE+ EA++ D+VL CP C + +VKGDGC+ +TCVCG F+W EL A Sbjct: 51 FKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTILP------------------------DEDENQV---------LPTDGMPKAVKEELLMEFERFNDGK-INDQELYERISTYFFSFENLPNPWLVMQPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKELEAEQLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWEELRRA 277
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A7S4D641_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D641_HETAK) HSP 1 Score: 147 bits (371), Expect = 5.420e-38 Identity = 92/261 (35.25%), Postives = 128/261 (49.04%), Query Frame = 1 Query: 1 FQGIVLSGFDGACPRMRCMSC-PRTVPEKAWGALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDVARCV-SPGTAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQK----EAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEA 765 F+ + SG+DG +M C +C R+VP WG + + + ++ RAA LL++QC CH R I+ D +E L + A +E ER++ G + E YE ++ S NP M +L I D RA LYLR+L+ + V + CCE QCFRCRT D HDGMTCE+ EA++ D+VL CP C + +VKGDGC+ +TCVCG F+W EL A Sbjct: 114 FKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTILP------------------------DEDENQV---------LPTDGMPKAVKEELLMEFERFNDGK-INDQELYERISTYFFSFENLPNPWLVMQPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKELEAEQLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWEELRRA 340
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A7S1TQX8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQX8_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.890e-27 Identity = 93/288 (32.29%), Postives = 134/288 (46.53%), Query Frame = 1 Query: 4 QGIVLSGFDGACPRMRCM--SCPRTVPEKAWGALVNIDVLD-------MFRHRAATLLSIQCGDCHSRGDIMV------------IPPAHH--SYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRR----------ALERY-----SAGNGLEVPEFYEDVARCVSPGTAKNPQARMTDVLLC-IEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEA-QRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNW 747 Q V + + GAC +RC +C +P W AL++ D F A ++LS+QCG CHSRG + V P H S + A + S + E +T E++ + V L ++ R AL+R A GL E+ V P TA+ + + + +LC I D ERRA+L R L H S CC + C+RC+T HDG++C+ + RG ++V+ C CGV++VKGDGC +I CVCG NFNW Sbjct: 274 QSHVDALYLGACKPLRCPDPACRAILPMPLWLALLDQKTGDERAGLRRQFIKYAKSVLSLQCGSCHSRGTLHVGDYPNAPSCFPLKPGCVHPLSMAGACSVAKSKAVVAALGREVTTTAPGGEAIPPKLASDVMEVPLMKYMRGHLDAGACWAALKRCVPQLACASEGLADEEYCPTVPGHADP-TAQYEKELLVNAVLCRIPDPERRAALLSRVLALHPKAKSNCCAYTHCYRCKTKGFHDGVSCDANQGWDRGAEQVVTCHNCGVWIVKGDGCSSINCVCGANFNW 560
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A7S2SQB9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQB9_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.260e-25 Identity = 87/289 (30.10%), Postives = 133/289 (46.02%), Query Frame = 1 Query: 19 SGFDGACPRMRCMSCPRTVPEKA-W--------GALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDVARCVSPGTA-KNPQARMTD---VLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRG-FDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKELEA-ADVFCAAHPSNPGRAAAEIL 840 SG+ GA RM C P+ + W G ++D F A +LS+QCG CH+R D+M S L+ +++ AL+ + + +++ +E + G + + A P A +P + T +L IED ER+A+L+ FL+ +S CC+ CFRC + H TCE+ +A R ++V+ CPGCGV + KGDGC +++CVCG +FNW + AK EA A +FC AA+IL Sbjct: 67 SGYPGAAIRMHCPIHPKRIAAAGRWQPAVMEHLGQADGKALIDRFTSHARGILSLQCGSCHARRDLM---------------------------RPTSKALADKAMQALQASHAPVYD-HLYKQHVEPFLVGAVSQEHVIVQCEAFLPKPEFALTHPSGKDTAFGLLLDSIEDDERKATLHYAFLRRFPKCISNCCKSVHCFRCHISGFHTNKTCEEFQASRTTVEDVVPCPGCGVQLTKGDGCSSVSCVCGNSFNW-DTEVAKIREALAKLFCEDFRDRTAHHAAQIL 326
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: T0S901_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S901_SAPDV) HSP 1 Score: 106 bits (264), Expect = 5.720e-23 Identity = 75/257 (29.18%), Postives = 110/257 (42.80%), Query Frame = 1 Query: 4 QGIVLSGFDGACPRMRCMSCPRTVPEKAWGALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDVARCVSPGTAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKEL 774 Q + G ++ C C +P W LV D L + A S C CH+ +++PP +ND + +T +E+ G E+ R L E YE V V+ A +T +L + D+ERRA+L+L + + V +RCC CF C+T HD + C K A ++++ CP C V +VKGDGCD+ITC CG +FNW + L A L Sbjct: 48 QAHSAAAISGVLTKLDCPICITPLPLPRWKELVGDDALQRLETKVAASCSTLCPQCHNFS--VLLPPTE----------------DTNDTNDDATDPWSEA-----GLTKLQPLCTEYNRHLR--------SAAEVYESV---VALYETDQRDAMLTRLLPLLLDAERRATLFLHWRRQQPFVFTRCCNQAVCFGCQTKGHHDNVAC--KSAAPMANDLVECPECRVQLVKGDGCDSITCFCGASFNWVDRLRAYRL 268
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A067CZX6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CZX6_SAPPC) HSP 1 Score: 101 bits (251), Expect = 3.750e-21 Identity = 71/258 (27.52%), Postives = 115/258 (44.57%), Query Frame = 1 Query: 4 QGIVLSGFDGACPRMRCMSCPRTVPEKAWGALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRR-ALERYSAGNGLEVPEFYEDVARCVSPGTAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKEL 774 Q + G ++ C C + +P W LV L + A S C CH+ +++PPAH ++NDA ++ V L AE +R A++ Y + GL + +++ +T +L + D+ERRA+L+L + + V +RCC+ CF C+T H+ + C+ ++++ CP C V +VKGDGCD+ITC CG +FNW + L A L Sbjct: 49 QAHSTAAISGVLTKLECPICIKPLPLPRWKELVGDSALLGLETKVAAACSTLCPQCHNFS--VLLPPAH----------------ETNDAACPWSEAGLTKVQPL------CAEFNHHQRSAIDVYESLVGLYGTDQRDEM---------------LTRLLPLLLDTERRATLFLHWRRQQPFVYTRCCDQAVCFGCQTKGHHENVPCQSVTPMA--NDLVGCPECHVQLVKGDGCDSITCFCGASFNWVDRLRAYRL 265
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A1V9ZSS8_9STRA (RING-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSS8_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 5.100e-19 Identity = 58/167 (34.73%), Postives = 87/167 (52.10%), Query Frame = 1 Query: 346 LKEFRRALERYSAGNGLEVPEFYEDVARCVSPGTAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKELEAADVFCAAHPSNPGRAAAEILRR 846 L F L Y A + L P F+ +V +PG + + + +L I D +RRA L+L + + H + CC P CFRC+TA H G++C + A ++ CP C +++VKGDGCDA+ C CG FNW + + A ++ A CA + R + LRR Sbjct: 154 LHRFVPGLVHYCA-HQLSAPAFFSEVE--ATPGVSLDVVLPL--LLERIFDPQRRARLFLYWRQRHPFTNTSCCHQPICFRCKTAGHHKGVSCTENAATSV--DMAQCPNCYLFLVKGDGCDAMQCFCGNGFNWRDQVLALRVQQA--LCAPKTTASFRLVIDFLRR 311
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A6G0XXX1_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXX1_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 6.630e-19 Identity = 71/250 (28.40%), Postives = 112/250 (44.80%), Query Frame = 1 Query: 31 GACPRMRCMSCPRTVPEKAWGALV--NIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDVARCVSPG--TAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAK 768 G ++ C C R V E W D++D+F R A +I C CHS+ + + P +N L ++ Q + E KL A L E R ++ P+ + R P T N Q +LL I+D+ERRA+L+LR + + + CC CF C+T D H G+ C + +++ CP C + +VKGDGCD +TC CG++F+W + ++ + Sbjct: 74 GVLAKLNCPICNRPVNETRWKERRPHTADLIDVFADRVAASCTILCPSCHSQYNALPCP-----VDQGLNEL---VDLQPSYLE----KLPA---------------LDEICRLYCQHEIS-----PDALCQLVRDAFPNHHTEVNRQ-----LLLYIQDTERRAALFLRLTREQPFIRTSCCSADICFTCKTKDHHHGVPCHARTTTN--EDLAACPSCNLTLVKGDGCDQMTCFCGSSFSWRDQVQLR 284 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10096.80.1 >prot_H-paniculata_contig10096.80.1 ID=prot_H-paniculata_contig10096.80.1|Name=mRNA_H-paniculata_contig10096.80.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp FQGIVLSGFDGACPRMRCMSCPRTVPEKAWGALVNIDVLDMFRHRAATLLback to top mRNA from alignment at H-paniculata_contig10096:4084..8870+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10096.80.1 ID=mRNA_H-paniculata_contig10096.80.1|Name=mRNA_H-paniculata_contig10096.80.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4787bp|location=Sequence derived from alignment at H-paniculata_contig10096:4084..8870+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10096:4084..8870+ >mRNA_H-paniculata_contig10096.80.1 ID=mRNA_H-paniculata_contig10096.80.1|Name=mRNA_H-paniculata_contig10096.80.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1692bp|location=Sequence derived from alignment at H-paniculata_contig10096:4084..8870+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |