mRNA_H-paniculata_contig10096.80.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10096.80.1
Unique NamemRNA_H-paniculata_contig10096.80.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: D7G6K5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K5_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 4.830e-76
Identity = 138/303 (45.54%), Postives = 191/303 (63.04%), Query Frame = 1
Query:    1 FQGIVLSGFDGACPRMRCMSCPRTVPEKAWGALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIES--------QSNDAEECSTKLSAESV--------SALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDV-ARCVSPGTAKNPQARMTDVLL----CIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKELEAADVFCAAHPSNPGRAAAEILRR 846
            F GIV +GFDGACPRMRCM CPR V E  W  LV   VL+ F+ RAATLLSIQCG CHSRG IMV PPA H YS A++ L + I S         +  A   +T+ S  ++        +++  +  NA  L+ FR +LERY +G+ ++    Y  + A   +PG  +  Q    ++++    C+EDSERRA+L++RF++ + +V+++CC+   C+ CR    H   TCEQ EA RG  +V  CPGCGVY+VKGDGCD+I+C+CG +F+W EL+ A+    AD F  AHP + GRAAA+I+RR
Sbjct:  107 FTGIVEAGFDGACPRMRCMCCPRVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPADHCYSSALDKLMAMIASGLAPATPPSATTATAITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGIGQAAQESRDELMVLLMSCVEDSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAFRDAHPEDTGRAAAQIIRR 409          
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A6H5JAV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV0_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 5.360e-40
Identity = 78/176 (44.32%), Postives = 111/176 (63.07%), Query Frame = 1
Query:  334 NAAELKEFRRALERYSAGNGLEVPEFYEDV-ARCVSPGTAKNPQARMTDVLL----CIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKELEAADVFCAAHPSNPGRAAAEILRR 846
            NA  ++ FR +LERY AG  ++    Y  + A   +PG  +  Q    ++++    C+ DSERR +L++RF++ + +V++RC +   C+ CR    H   TCEQ EA RG  +V  CPGCGVY+VKGDGCD+I+CVCG  FNW EL+ A+     D F  AHP + GRAAA+I+RR
Sbjct:   48 NAQRMERFRDSLERYIAGYEIDPSPCYIALEAAIANPGIGQAAQESRDELMVLLLSCVVDSERRENLHIRFIRSNPMVVTRCYKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCVCGHCFNWSELVAARHRRIVDAFRDAHPEDTGRAAAQIIRR 223          
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A7S3XSF2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSF2_HETAK)

HSP 1 Score: 147 bits (371), Expect = 1.450e-38
Identity = 92/261 (35.25%), Postives = 128/261 (49.04%), Query Frame = 1
Query:    1 FQGIVLSGFDGACPRMRCMSC-PRTVPEKAWGALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDVARCV-SPGTAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQK----EAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEA 765
            F+  + SG+DG   +M C +C  R+VP   WG + + +   ++  RAA LL++QC  CH R  I+                         D +E            L    +  A  +E     ER++ G  +   E YE ++    S     NP   M  +L  I D   RA LYLR+L+ +  V + CCE  QCFRCRT D HDGMTCE+     EA++  D+VL CP C + +VKGDGC+ +TCVCG  F+W EL  A
Sbjct:   51 FKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTILP------------------------DEDENQV---------LPTDGMPKAVKEELLMEFERFNDGK-INDQELYERISTYFFSFENLPNPWLVMQPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKELEAEQLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWEELRRA 277          
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A7S4D641_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D641_HETAK)

HSP 1 Score: 147 bits (371), Expect = 5.420e-38
Identity = 92/261 (35.25%), Postives = 128/261 (49.04%), Query Frame = 1
Query:    1 FQGIVLSGFDGACPRMRCMSC-PRTVPEKAWGALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDVARCV-SPGTAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQK----EAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEA 765
            F+  + SG+DG   +M C +C  R+VP   WG + + +   ++  RAA LL++QC  CH R  I+                         D +E            L    +  A  +E     ER++ G  +   E YE ++    S     NP   M  +L  I D   RA LYLR+L+ +  V + CCE  QCFRCRT D HDGMTCE+     EA++  D+VL CP C + +VKGDGC+ +TCVCG  F+W EL  A
Sbjct:  114 FKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTILP------------------------DEDENQV---------LPTDGMPKAVKEELLMEFERFNDGK-INDQELYERISTYFFSFENLPNPWLVMQPILQKIRDEGFRAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKELEAEQLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWEELRRA 340          
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A7S1TQX8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQX8_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.890e-27
Identity = 93/288 (32.29%), Postives = 134/288 (46.53%), Query Frame = 1
Query:    4 QGIVLSGFDGACPRMRCM--SCPRTVPEKAWGALVNIDVLD-------MFRHRAATLLSIQCGDCHSRGDIMV------------IPPAHH--SYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRR----------ALERY-----SAGNGLEVPEFYEDVARCVSPGTAKNPQARMTDVLLC-IEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEA-QRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNW 747
            Q  V + + GAC  +RC   +C   +P   W AL++    D        F   A ++LS+QCG CHSRG + V             P   H  S + A +   S     +   E  +T    E++     + V    L ++ R          AL+R       A  GL   E+   V     P TA+  +  + + +LC I D ERRA+L  R L  H    S CC +  C+RC+T   HDG++C+  +   RG ++V+ C  CGV++VKGDGC +I CVCG NFNW
Sbjct:  274 QSHVDALYLGACKPLRCPDPACRAILPMPLWLALLDQKTGDERAGLRRQFIKYAKSVLSLQCGSCHSRGTLHVGDYPNAPSCFPLKPGCVHPLSMAGACSVAKSKAVVAALGREVTTTAPGGEAIPPKLASDVMEVPLMKYMRGHLDAGACWAALKRCVPQLACASEGLADEEYCPTVPGHADP-TAQYEKELLVNAVLCRIPDPERRAALLSRVLALHPKAKSNCCAYTHCYRCKTKGFHDGVSCDANQGWDRGAEQVVTCHNCGVWIVKGDGCSSINCVCGANFNW 560          
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A7S2SQB9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQB9_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.260e-25
Identity = 87/289 (30.10%), Postives = 133/289 (46.02%), Query Frame = 1
Query:   19 SGFDGACPRMRCMSCPRTVPEKA-W--------GALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDVARCVSPGTA-KNPQARMTD---VLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRG-FDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKELEA-ADVFCAAHPSNPGRAAAEIL 840
            SG+ GA  RM C   P+ +     W        G      ++D F   A  +LS+QCG CH+R D+M                              S  L+ +++ AL+ +     +   +++ +E +  G   +     +  A    P  A  +P  + T    +L  IED ER+A+L+  FL+     +S CC+   CFRC  +  H   TCE+ +A R   ++V+ CPGCGV + KGDGC +++CVCG +FNW +   AK  EA A +FC          AA+IL
Sbjct:   67 SGYPGAAIRMHCPIHPKRIAAAGRWQPAVMEHLGQADGKALIDRFTSHARGILSLQCGSCHARRDLM---------------------------RPTSKALADKAMQALQASHAPVYD-HLYKQHVEPFLVGAVSQEHVIVQCEAFLPKPEFALTHPSGKDTAFGLLLDSIEDDERKATLHYAFLRRFPKCISNCCKSVHCFRCHISGFHTNKTCEEFQASRTTVEDVVPCPGCGVQLTKGDGCSSVSCVCGNSFNW-DTEVAKIREALAKLFCEDFRDRTAHHAAQIL 326          
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: T0S901_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S901_SAPDV)

HSP 1 Score: 106 bits (264), Expect = 5.720e-23
Identity = 75/257 (29.18%), Postives = 110/257 (42.80%), Query Frame = 1
Query:    4 QGIVLSGFDGACPRMRCMSCPRTVPEKAWGALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDVARCVSPGTAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKEL 774
            Q    +   G   ++ C  C   +P   W  LV  D L     + A   S  C  CH+    +++PP                   +ND  + +T   +E+     G         E+ R L            E YE V   V+        A +T +L  + D+ERRA+L+L + +    V +RCC    CF C+T   HD + C  K A    ++++ CP C V +VKGDGCD+ITC CG +FNW + L A  L
Sbjct:   48 QAHSAAAISGVLTKLDCPICITPLPLPRWKELVGDDALQRLETKVAASCSTLCPQCHNFS--VLLPPTE----------------DTNDTNDDATDPWSEA-----GLTKLQPLCTEYNRHLR--------SAAEVYESV---VALYETDQRDAMLTRLLPLLLDAERRATLFLHWRRQQPFVFTRCCNQAVCFGCQTKGHHDNVAC--KSAAPMANDLVECPECRVQLVKGDGCDSITCFCGASFNWVDRLRAYRL 268          
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A067CZX6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CZX6_SAPPC)

HSP 1 Score: 101 bits (251), Expect = 3.750e-21
Identity = 71/258 (27.52%), Postives = 115/258 (44.57%), Query Frame = 1
Query:    4 QGIVLSGFDGACPRMRCMSCPRTVPEKAWGALVNIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRR-ALERYSAGNGLEVPEFYEDVARCVSPGTAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKEL 774
            Q    +   G   ++ C  C + +P   W  LV    L     + A   S  C  CH+    +++PPAH                ++NDA    ++     V  L       AE    +R A++ Y +  GL   +  +++               +T +L  + D+ERRA+L+L + +    V +RCC+   CF C+T   H+ + C+        ++++ CP C V +VKGDGCD+ITC CG +FNW + L A  L
Sbjct:   49 QAHSTAAISGVLTKLECPICIKPLPLPRWKELVGDSALLGLETKVAAACSTLCPQCHNFS--VLLPPAH----------------ETNDAACPWSEAGLTKVQPL------CAEFNHHQRSAIDVYESLVGLYGTDQRDEM---------------LTRLLPLLLDTERRATLFLHWRRQQPFVYTRCCDQAVCFGCQTKGHHENVPCQSVTPMA--NDLVGCPECHVQLVKGDGCDSITCFCGASFNWVDRLRAYRL 265          
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A1V9ZSS8_9STRA (RING-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSS8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 5.100e-19
Identity = 58/167 (34.73%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  346 LKEFRRALERYSAGNGLEVPEFYEDVARCVSPGTAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAKELEAADVFCAAHPSNPGRAAAEILRR 846
            L  F   L  Y A + L  P F+ +V    +PG + +    +  +L  I D +RRA L+L + + H    + CC  P CFRC+TA  H G++C +  A     ++  CP C +++VKGDGCDA+ C CG  FNW + + A  ++ A   CA   +   R   + LRR
Sbjct:  154 LHRFVPGLVHYCA-HQLSAPAFFSEVE--ATPGVSLDVVLPL--LLERIFDPQRRARLFLYWRQRHPFTNTSCCHQPICFRCKTAGHHKGVSCTENAATSV--DMAQCPNCYLFLVKGDGCDAMQCFCGNGFNWRDQVLALRVQQA--LCAPKTTASFRLVIDFLRR 311          
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Match: A0A6G0XXX1_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXX1_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.630e-19
Identity = 71/250 (28.40%), Postives = 112/250 (44.80%), Query Frame = 1
Query:   31 GACPRMRCMSCPRTVPEKAWGALV--NIDVLDMFRHRAATLLSIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSAESVSALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDVARCVSPG--TAKNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTADAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWYELLEAK 768
            G   ++ C  C R V E  W        D++D+F  R A   +I C  CHS+ + +  P         +N L   ++ Q +  E    KL A               L E  R   ++        P+    + R   P   T  N Q     +LL I+D+ERRA+L+LR  +    + + CC    CF C+T D H G+ C  +      +++  CP C + +VKGDGCD +TC CG++F+W + ++ +
Sbjct:   74 GVLAKLNCPICNRPVNETRWKERRPHTADLIDVFADRVAASCTILCPSCHSQYNALPCP-----VDQGLNEL---VDLQPSYLE----KLPA---------------LDEICRLYCQHEIS-----PDALCQLVRDAFPNHHTEVNRQ-----LLLYIQDTERRAALFLRLTREQPFIRTSCCSADICFTCKTKDHHHGVPCHARTTTN--EDLAACPSCNLTLVKGDGCDQMTCFCGSSFSWRDQVQLR 284          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10096.80.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6K5_ECTSI4.830e-7645.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JAV0_9PHAE5.360e-4044.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XSF2_HETAK1.450e-3835.25Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4D641_HETAK5.420e-3835.25Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S1TQX8_9STRA1.890e-2732.29Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SQB9_9STRA3.260e-2530.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
T0S901_SAPDV5.720e-2329.18Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067CZX6_SAPPC3.750e-2127.52Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A1V9ZSS8_9STRA5.100e-1934.73RING-type domain-containing protein n=1 Tax=Achlya... [more]
A0A6G0XXX1_9STRA6.630e-1928.40RING-type domain-containing protein n=1 Tax=Aphano... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10096contigH-paniculata_contig10096:4084..8870 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.1
Seed ortholog evalue1.5e-67
Seed eggNOG ortholog2880.D7G6K5
Hectar predicted targeting categoryother localisation
EggNOG OGs2EGD3@1,2SAJF@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-05_006520.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size846
Cds size846
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10096.80.1prot_H-paniculata_contig10096.80.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10096 4084..8870 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928716.136691-CDS-H-paniculata_contig10096:4083..42421622928716.136691-CDS-H-paniculata_contig10096:4083..4242Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 4084..4242 +
1691480591.2164297-CDS-H-paniculata_contig10096:4083..42421691480591.2164297-CDS-H-paniculata_contig10096:4083..4242Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 4084..4242 +
1622928716.1541224-CDS-H-paniculata_contig10096:5313..53751622928716.1541224-CDS-H-paniculata_contig10096:5313..5375Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 5314..5375 +
1691480591.2251935-CDS-H-paniculata_contig10096:5313..53751691480591.2251935-CDS-H-paniculata_contig10096:5313..5375Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 5314..5375 +
1622928716.1731384-CDS-H-paniculata_contig10096:6541..68161622928716.1731384-CDS-H-paniculata_contig10096:6541..6816Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 6542..6816 +
1691480591.2332518-CDS-H-paniculata_contig10096:6541..68161691480591.2332518-CDS-H-paniculata_contig10096:6541..6816Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 6542..6816 +
1622928716.1930573-CDS-H-paniculata_contig10096:7562..76531622928716.1930573-CDS-H-paniculata_contig10096:7562..7653Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 7563..7653 +
1691480591.2427123-CDS-H-paniculata_contig10096:7562..76531691480591.2427123-CDS-H-paniculata_contig10096:7562..7653Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 7563..7653 +
1622928716.211757-CDS-H-paniculata_contig10096:8290..84061622928716.211757-CDS-H-paniculata_contig10096:8290..8406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 8291..8406 +
1691480591.2516327-CDS-H-paniculata_contig10096:8290..84061691480591.2516327-CDS-H-paniculata_contig10096:8290..8406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 8291..8406 +
1622928716.2247741-CDS-H-paniculata_contig10096:8727..88701622928716.2247741-CDS-H-paniculata_contig10096:8727..8870Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 8728..8870 +
1691480591.270319-CDS-H-paniculata_contig10096:8727..88701691480591.270319-CDS-H-paniculata_contig10096:8727..8870Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10096 8728..8870 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10096.80.1

>prot_H-paniculata_contig10096.80.1 ID=prot_H-paniculata_contig10096.80.1|Name=mRNA_H-paniculata_contig10096.80.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp
FQGIVLSGFDGACPRMRCMSCPRTVPEKAWGALVNIDVLDMFRHRAATLL
SIQCGDCHSRGDIMVIPPAHHSYSDAMNTLFSSIESQSNDAEECSTKLSA
ESVSALKGTAVNAAELKEFRRALERYSAGNGLEVPEFYEDVARCVSPGTA
KNPQARMTDVLLCIEDSERRASLYLRFLKFHHVVLSRCCEHPQCFRCRTA
DAHDGMTCEQKEAQRGFDEVLICPGCGVYMVKGDGCDAITCVCGTNFNWY
ELLEAKELEAADVFCAAHPSNPGRAAAEILRR
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mRNA from alignment at H-paniculata_contig10096:4084..8870+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10096.80.1 ID=mRNA_H-paniculata_contig10096.80.1|Name=mRNA_H-paniculata_contig10096.80.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4787bp|location=Sequence derived from alignment at H-paniculata_contig10096:4084..8870+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTCAGGGCATCGTGTTGTCTGGCTTCGACGGCGCATGTCCTCGCATGCG ATGCATGAGCTGCCCCCGTACGGTGCCGGAGAAGGCTTGGGGGGCGCTAG TGAACATTGACGTGCTCGACATGTTCCGCCACAGGGCAGCAACTCTTCTC TCTATTCAGGTGTGCTCCGTAGTTTACACGAACAAAAAGAGTATACAAAT ATTTCCTCGGTGCCATAAGTAAGCCGGTTGAGTTTATAGAGGCACGTATC AGATTTCAGCTTTCAAACGATTTCGTCCGCATCCTTTGAAAAGTTCAAGA TTTTTGGAAATAAGATTTGCCAAATTTAACCGACTTTTTTACAGCACAGG AAGTAGATCTATGCTTGGAAGTGTATATGTGAATATACTGCAACATTAAC CATACTGTACTACGTATATCGGTGAATACACTGCAACATTAACCATGCCA TGCAATATCATATGGACATGAAATATTCACTCATCAAGGACTCAACAAAG CCCTCGTCAAACTGGAAGTCCACACCTTACAACTCAAAATTAAGGCCAAA ACAGGTAAAATGCCCGCGAAGTGTTCCAAGATTTGAATGACCGCCTGAAA ACAACACTTCGAAGTTGGCTTGCAAGGCTGCGCGAGCAAGAGGCTAACTT TGGAACGTTTTTTACATGTTAATATATTAATATATGCGTGACACGAAGTA TCAACAACACCATAGAGTATTGAAACATGCAGTCGAGAGTCGTCATTAGA TAGGCTGTTTCTTCTACCGGGCAACCTCTCACCTTCCTTGAGAATGGGGT GCTCAACAAGAGATATCCACCAGGGGTGATATCGGACGCGATACATGCTG AAATATAAGTGTGACACTCTAGCCGTACTATTTATTTTGACCTAACCAGT TTTGGTGACAACAAAAGAGGCTAGAAATGTTCGAAACCCAAGCTCTCGTA GCAGTCGATTGTTTTCGGCAGAACACTGTCGTGCTGCTCGAGCCTACTAA ATAAGTTTTCAACAGTAATCATTCCTAGGTCTCCCCCCCCCTGCCCCCCC CCCGCGCGCGCGTATCTCCCTTAAACCTCGCTCGAAGCAAGTTGTCTTGA TAGCATCTGGATCTCTTCGAACCTCCTGTTTCTTGTTTTCATTAACCCCC CCCCCCCCCCCCGACGTTCCCATCCTATTTGTGTTCTCTCTGTTTTTTTT CATTGATCGTGACTTTGATTCACGTGGAAGTGCGGTGACTGCCACTCCCG CGGTGACATCATGGTCATTCCCCCGGCTCATCACTCCTACAGGTTTGGGA AAATTGTGGTTGAATGATTCAGATGAAGGTATCCTGCTGGTTTGTCGGGA TTGAATCTCATGAGTATCGATTGCTTTTCTAGAGCCTGTGATTGGTTGGA GAATCCAGAGGTAAATAGTTTGGGGGTCACAAAACAATCATAGGCCTTGG AAAGAGATGGAATCTCCACGGAAATCGATTTGTCGATATCGATACCGTGG GCCCTGAAGAACGTGATCAATAGATATTCCCTTCAGGAACAATTGTGTGT TTTAAACCCAATGAAAAAGCCGCCCTACAATCCGGGGTGTCATCCATTTT TGCCATGGAGATCCGTGTGTTTGGAGTTGAAAGCGATTGTTCATAAAAGC ACGAAGATGTCTTCTCCGTAAAAATGGGGAGCAAATAACAAAGGCAAAAC AAAGTTGACGTCATGATGTTTAGGTAGTCACTCAGAAAATATCATGCTCC ACACAACCACTGCCTCCGTCGCCGCTGCCGCCTGCTGCTATTTCTCTGAC TCTGTGACATGGCTCCTTCCTCAGACATGACAGTCTTCGGCGTGTCCTGG GCAATAGTTTCACTCAGGACGTTTCTTTACGGTTCCCTTCTTTTTATTAT CCTTCCTCACACAAACGTAAACCCGACTGCAACTGGCATATCCAATACAG CATCGGTGGTCCTATCGCGTTCAATCCAACAGAAGGTCCTACTCACACGG GACTCAACTCCGCAGACACCTAGGTATCTTATCTCAACACCGATATTGTC ATCCTCCCTGCCTTCGTCACCTTCTCTGTGACCATGAACCCTTTGTCGTA GGACAGCTCCGAATTCGGACCCAAACATGAACGCAAAAACAATACGGCAA TGAAGGCTCGACCATTAGACCCACGCACACCTCTTGACCTCAACTTTAAT ACAAAATTGCATTCAGATACAGACGACTTGGTCTCTAAAATCAGCCCATC AATTGTAGCTTCCCCGATAGCGTTCCGTACCATCCCCCCCTTAGCCATCG GAGATCACTGTGATTGAAACAATTCTCCGTCCTATCTAGGACAAGTGGTC AATGGTCTATCAATAACTGCTAAACATGAGTACACCCTTCACCCCCCCCC CCTCCCCCCCCCTGCCGGTCTCCGGTCCCTCCCCCAACCACCCGGGCCCC GCACACAGCGATGCTATGAATACCCTATTCAGCAGCATTGAAAGCCAATC GAACGATGCGGAGGAATGTTCCACGAAACTTTCCGCAGAGAGTGTTTCTG CCCTTAAGGGCACAGCAGTGAATGCCGCAGAACTCAAGGAGTTTCGCCGA GCTCTCGAGCGCTACTCTGCGGGAAATGGCCTCGAGGTACCCGAATTCTA TGAGGATGTGGCGAGGTGCGTTTCGCCCGGGACTGCGAAGAACCCGCAGG CCCGCATGACGGACGTTCTGCTCTGTATCGAGGGTGAGTGATGGATTAAG CGTGGCGCGAAGGGGGGCGTGAGTGGCTCAAAACGCTTGCCGTTCACATA ATTTCGCTTGCGGACCCTCACTGGTTCACGTGCTTTTTGCTGTATCAGAA CGCATTTGTGCAGACTTGAGGTTTTATAGCCTAGAATACACGTGATCTGG GATTAATGTTATCAGGAACAAGTAAGGACAATCGATGATAGGAACGGATG GCTGTAACAGGGGCTTATCGCCAAAGAACAGTAGGCAGGTGTCACGCACT CGAAGCCCACGTTATGTTGTGTGCACGAGTCGTCACGCTTACGGTCCTAC CACACACACATCCGCTTGGTAAGAGGCGTTTAAAGGTTGTCATGCCTGAT GAGGACTCCTGACCTGCGGTGATGCGCTGCAATGGGATAGATTCCAGATG GCGGGAAATTTGCCCTGATGGTGGCTACAGGTACTCGTATGTGAAGAAAG GAAGGCCTGCCTGAAAATGCGCCGTTGTTAAGTCGCATATCGAGAAAATG TATATTCCTACAATCTCAATCCTAAAAGTATGATCCTACCCCTGAGCCTT GACCATCATTATATTGGTGTCATTCTCTATGTAGAGCCGTCCATGACTTG ACTGAACATCGCACGCCTTCATTGGCGACTCCAGCCTCCCCACCCCTCCT GCCTCCCCCCTGCGACGACAAACACGCCCTCTCCCCCCTCCTACCCGCTT CTATGCTCGCCGTCGCAATTACCTGACAGACTCCGAGCGACGGGCGAGCC TGTATCTCCGCTTCTTGAAATTTCACCACGTGGTCTTGTCGCGCTGCTGC GAACACCCTCAATGCTTCAGGTACCTGTCGTATATCAAAAACCCAAGGAG GGCCAAAACCCAAACCTGGGCCCCGGCCGAAATCTCAATTTTCGTTTTAC CAGGGCTTGATGCGGGACCTCGTCATTTTTTTCAAGGACGGAACGAGGTT CAGTCCTGTCCAACCATTCTCGTTAAGTATAGGACCGAGTCCCATCCCCG TTGTAGAGCGAGAACGAGCAAACACCGAGCTTATCTCGTGAAAACCAAAG AAAAAACAAGGTTGGCATATCTGATTTGAGGGTCATAGACTCCACCCTGA CACGTCAAGCTTCCCTCCCTTTTCCCCAGTACATAGTCTGCTTGTGTGGT ACATGTTGAGCCGGGGAATAGTAAGGGAATGGACTACCTCTCCTTTTCCG GGCAGGCAGTAAACGGATTCTATATTTTCACAAAAATAGTTTACGGGAGG TGCTCGGGATCTCGACACCGAGCACTGCAGATGTAATTTGACAACACGTC CTATTGTTTGAACCTACACTACAGTGGTTGTCGGTTTTGCATCGTAGGGT GTGTGTGCAAACTGGAACTGAATGGTGTTCTCTCGTTTTACACGTGAATT CCCTCTTTTGCGGTGGGTTGTTGCGTGCATGCGTTCGTTTATTTTCGCAC AAAACAGGTGCAGAACGGCTGATGCTCACGATGGCATGACCTGCGAGCAA AAGGAAGCTCAACGCGGGTTCGACGAAGTGTTGATATGTCCCGGGTGCGG CGTATACATGGTCAAGGGAGATGGTGAGAGAAGAAACGTTTCAAGAGTTA CTAGCTGCACAATTTGACGGTCCGACTCGCGCTGCTTAGATCCAAGATAT ACCTTGTCTGCCCATCATTTATTATTTCTCAGACCCCCTGCTGAACGTCC GTACACTATTTTTCTCACGCCGTGTATCAAGGAAGAAAAACTCCAGGGGT GGTGGTCAAAGGCGCACTGGGCAACCGCAGAGCGCTAGAGCAGCATCTTA ATTTCTGATTTTCTTCGGTAATACACAGCCATACTATACAATATACCATA TTCACCACTACACCAAACAAACGCACCCAACCTCAACCCTACAGGCTGCG ATGCCATCACATGCGTATGCGGCACCAATTTCAATTGGTATGAGCTCCTG GAAGCGAAGGAATTGGAAGCCGCCGATGTATTCTGCGCGGCGCACCCCTC AAACCCCGGCCGCGCTGCCGCCGAGATCTTGCGGCGC
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Coding sequence (CDS) from alignment at H-paniculata_contig10096:4084..8870+

>mRNA_H-paniculata_contig10096.80.1 ID=mRNA_H-paniculata_contig10096.80.1|Name=mRNA_H-paniculata_contig10096.80.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1692bp|location=Sequence derived from alignment at H-paniculata_contig10096:4084..8870+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTCAGGGCATCGTGTTGTCTGGCTTCGACGGCGCATGTCCTCGCATGCG
ATGCATGAGCTGCCCCCGTACGGTGCCGGAGAAGGCTTGGGGGGCGCTAG
TGAACATTGACGTGCTCGACATGTTCCGCCACAGGGCAGCAACTCTTCTC
TCTATTCAGTTTCAGGGCATCGTGTTGTCTGGCTTCGACGGCGCATGTCC
TCGCATGCGATGCATGAGCTGCCCCCGTACGGTGCCGGAGAAGGCTTGGG
GGGCGCTAGTGAACATTGACGTGCTCGACATGTTCCGCCACAGGGCAGCA
ACTCTTCTCTCTATTCAGTGCGGTGACTGCCACTCCCGCGGTGACATCAT
GGTCATTCCCCCGGCTCATCACTCCTACAGTGCGGTGACTGCCACTCCCG
CGGTGACATCATGGTCATTCCCCCGGCTCATCACTCCTACAGCGATGCTA
TGAATACCCTATTCAGCAGCATTGAAAGCCAATCGAACGATGCGGAGGAA
TGTTCCACGAAACTTTCCGCAGAGAGTGTTTCTGCCCTTAAGGGCACAGC
AGTGAATGCCGCAGAACTCAAGGAGTTTCGCCGAGCTCTCGAGCGCTACT
CTGCGGGAAATGGCCTCGAGGTACCCGAATTCTATGAGGATGTGGCGAGG
TGCGTTTCGCCCGGGACTGCGAAGAACCCGCAGGCCCGCATGACGGACGT
TCTGCTCTGTATCGAGGCGATGCTATGAATACCCTATTCAGCAGCATTGA
AAGCCAATCGAACGATGCGGAGGAATGTTCCACGAAACTTTCCGCAGAGA
GTGTTTCTGCCCTTAAGGGCACAGCAGTGAATGCCGCAGAACTCAAGGAG
TTTCGCCGAGCTCTCGAGCGCTACTCTGCGGGAAATGGCCTCGAGGTACC
CGAATTCTATGAGGATGTGGCGAGGTGCGTTTCGCCCGGGACTGCGAAGA
ACCCGCAGGCCCGCATGACGGACGTTCTGCTCTGTATCGAGGACTCCGAG
CGACGGGCGAGCCTGTATCTCCGCTTCTTGAAATTTCACCACGTGGTCTT
GTCGCGCTGCTGCGAACACCCTCAATGCTTCAGACTCCGAGCGACGGGCG
AGCCTGTATCTCCGCTTCTTGAAATTTCACCACGTGGTCTTGTCGCGCTG
CTGCGAACACCCTCAATGCTTCAGGTGCAGAACGGCTGATGCTCACGATG
GCATGACCTGCGAGCAAAAGGAAGCTCAACGCGGGTTCGACGAAGTGTTG
ATATGTCCCGGGTGCGGCGTATACATGGTCAAGGGAGATGGTGCAGAACG
GCTGATGCTCACGATGGCATGACCTGCGAGCAAAAGGAAGCTCAACGCGG
GTTCGACGAAGTGTTGATATGTCCCGGGTGCGGCGTATACATGGTCAAGG
GAGATGGCTGCGATGCCATCACATGCGTATGCGGCACCAATTTCAATTGG
TATGAGCTCCTGGAAGCGAAGGAATTGGAAGCCGCCGATGTATTCTGCGC
GGCGCACCCCTCAAACCCCGGCCGCGCTGCCGCCGAGATCTTGCGGCGCG
CTGCGATGCCATCACATGCGTATGCGGCACCAATTTCAATTGGTATGAGC
TCCTGGAAGCGAAGGAATTGGAAGCCGCCGATGTATTCTGCGCGGCGCAC
CCCTCAAACCCCGGCCGCGCTGCCGCCGAGATCTTGCGGCGC
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