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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 2680 |
| Cds size | 2403 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10094.78.1 >prot_H-paniculata_contig10094.78.1 ID=prot_H-paniculata_contig10094.78.1|Name=mRNA_H-paniculata_contig10094.78.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=801bp
MEDRTSVVPNEEGMKGKGNGKDKCRRESSKKPNKPEENKPEQQKLEEQET
SVQQKGKQEEGGATPSSAGGALAAFSDDEITLSAAKVSLSSAQPARLSPL
RGKYKEQQQQQQEQQQQQEQQQQQQQLSVVLPSQLGKRRRTEQREGVEPT
LPKKRHGDDILLGEDAALSKAEEALDDGNASARNYGAIATITPAGAIGED
GGTGVQAIASEVGGPGSRGVPPSSSSAGAGDGTVAASESGEPTSKRLRGE
TPVAADGRGKLEVPAGEAGEKVAPAVGPLAAFPVDGNPKSAVGTIAPSAA
SAVKDDGAHSAAAAATEEKKSDAPTSQTSTGSAGGGSEMVTTTSSESSAA
SMESGSGDSSGKSSPTEATHDEGVETAIALPHAVGLSAKGTEEIKSVAVV
EKTSTMVQPVMTASKEQEQHGPGGVSDPTATEAIDGGSTPATISMVAPEP
PLEKTISLIPNAESGEGVSVVTNSSPWRGGVTLHGASPAPAVTANGGGSN
QLRNPPRRNSSETNGKSIDGGEVNDGGISSNDDGTDGSDLGDRGSVTMGD
KSSAEHFVSPSGKKASFSSAPGSRAFMDPTATHAVDGIRGRGGGEEEESV
SIVAAASQIAGRKRTAAELEAAAGLAMGQKGVGEAMARFSSPMGQHTSNG
HATTAAVDRSRERFEGGGGGGAGCSTPPARGISPKGALDIMALAASSRPR
AETPSTSGSISRGGCIWGGTPGRGNIGAIANSPVRGRAFAGDAHMVFSPP
RSATSPLDLMAEAVQAREPAPLLQIPRGGKVEGGGGSRNSSQGPSKKPRV
* back to topmRNA from alignment at H-paniculata_contig10094:334..3539- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10094.78.1 ID=mRNA_H-paniculata_contig10094.78.1|Name=mRNA_H-paniculata_contig10094.78.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3206bp|location=Sequence derived from alignment at H-paniculata_contig10094:334..3539- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGAATGTGACGGGGGGACGCCATCGGTGGTGCTGGATGGCGCGACCGAG
GGAGTTGCCTCGAAGGCGGAGGAGCGGGAGCAGATGGAAGACAGGACGAG
TGTGGTGCCGAATGAGGAAGGGATGAAGGGGAAGGGGAACGGTAAGGACA
AGTGCAGACGCGAGTCGAGCAAGAAGCCAAACAAGCCTGAGGAGAACAAA
CCCGAGCAGCAGAAGCTGGAGGAGCAGGAAACGAGTGTGCAGCAGAAAGG
CAAGCAGGAAGAGGGGGGGGCGACTCCTTCCTCTGCCGGTGGTGCACTTG
CTGCGTTCTCTGATGATGAGATCACCTTGAGCGCTGCTAAGGTATCGCTG
TCGTCTGCCCAGCCCGCGCGTCTCTCGCCTCTACGCGGAAAATATAAAGA
ACAGCAGCAGCAGCAGCAGGAGCAACAGCAGCAGCAGGAGCAACAGCAGC
AACAGCAGCAACTGTCTGTAGTTCTGCCCTCTCAGCTCGGCAAGAGGCGG
CGTACCGAGCAACGTGAGGGCGTAGAACCGACCCTGCCCAAAAAACGACA
TGGTGATGATATTTTACTGGGAGAGGATGCTGCGTTGAGCAAGGCCGAGG
AAGCACTCGACGATGGGAACGCCTCTGCACGTAACTATGGCGCCATCGCC
ACCATCACCCCCGCCGGCGCCATTGGTGAGGACGGTGGTACCGGCGTGCA
AGCGATAGCGAGTGAAGTCGGGGGGCCAGGGTCGCGCGGCGTGCCGCCGT
CCTCGTCGTCAGCGGGAGCGGGCGATGGTACGGTCGCTGCCAGTGAATCG
GGGGAGCCAACGAGTAAGCGACTTCGAGGGGAAACACCAGTTGCCGCCGA
CGGCCGAGGGAAACTAGAAGTACCAGCTGGAGAGGCTGGAGAAAAAGTCG
CCCCTGCTGTTGGCCCACTTGCGGCCTTTCCTGTTGATGGTAATCCAAAG
AGTGCCGTGGGTACCATTGCGCCTTCGGCGGCTAGTGCTGTCAAGGACGA
TGGGGCACACTCCGCTGCAGCCGCCGCCACTGAGGAAAAAAAGAGCGACG
CACCAACATCACAGACATCGACGGGATCTGCTGGAGGAGGTTCTGAGATG
GTCACCACCACTTCGTCCGAATCCAGTGCTGCGTCGATGGAATCTGGGTC
GGGCGACAGCAGCGGGAAATCTTCACCTACTGAGGCTACCCACGATGAAG
GTGTCGAGACAGCGATCGCGTTGCCGCATGCGGTTGGCCTTTCAGCTAAA
GGCACGGAGGAGATCAAATCCGTGGCTGTTGTTGAGAAAACAAGCACAAT
GGTTCAACCCGTAATGACGGCATCAAAAGAGCAGGAGCAGCACGGCCCCG
GTGGCGTGTCTGATCCCACTGCTACGGAAGCAATCGATGGTGGCTCGACT
CCGGCTACGATATCAATGGTAGCGCCCGAGCCACCATTGGAGAAAACGAT
ATCCCTGATCCCCAACGCCGAATCTGGTGAGGGCGTCAGCGTGGTGACAA
ATTCTTCTCCTTGGAGGGGTGGCGTAACCCTACACGGGGCGTCGCCTGCC
CCTGCCGTAACGGCGAACGGGGGAGGCTCGAATCAGCTGCGAAATCCGCC
ACGACGAAATAGCAGCGAGACTAACGGAAAGAGCATCGACGGGGGTGAAG
TCAACGATGGTGGCATTAGCAGCAACGACGATGGCACCGACGGCAGCGAC
CTCGGCGACCGAGGCAGTGTTACGATGGGAGACAAAAGCAGCGCTGAACA
CTTTGTCTCACCTTCGGGTAAGAAAGCTTCTTTTTCCAGTGCCCCGGGCA
GCCGCGCGTTCATGGATCCGACGGCGACGCATGCGGTCGACGGGATCCGA
GGAAGAGGAGGAGGAGAAGAAGAAGAGAGTGTCTCGATCGTCGCGGCAGC
ATCGCAAATTGCCGGACGGAAGAGGACCGCCGCCGAGCTGGAGGCGGCCG
CTGGGCTCGCCATGGGCCAGAAAGGAGTTGGAGAGGCGATGGCGCGATTT
AGCTCGCCGATGGGTCAGCACACCAGCAACGGACATGCGACGACAGCGGC
GGTAGATAGGTCTAGGGAAAGGTTTGAAGGTGGCGGTGGCGGAGGTGCGG
GTTGTAGCACGCCGCCCGCGCGCGGTATATCACCCAAGGGTGCTCTGGAT
ATCATGGTGAGTTTAAGCAAGATCTTGATGGCGGTATGTCCAGGATTTGT
GAGGTTGACTCTCATGTTTGGTACTTTGATGAACACAGTGGCTGACCATA
CGTTTTTTGTTGCTGTGTCTAATCGTTGTACTGTCAGTTCACCAATATTC
GTTCAGCAGCCCATGCGCACTTCCCCCCTGCTAACTTTTGGTCGTTTTCT
TTGGAAGGGCATGCTTTCCCATTTGTTGAAAAGAATTGCTGCATGCGTCT
CATTTTTTCTCTCATCTTAATTTTTTTGTGTTATTCCTGCGTGCAACCCT
TGTATAGATTTGCAAATTGCTGATTTTCTATAAGCATGATTATGGGCTGT
ATAACCTCAGCTTAATGTACTACAGTTATGTTGAAAAACTGCTACATGTA
TATGTATATTGGAAGAGTGCTGGGGCTAATGATACTTGTGTCTGAAATAT
GTCTTATTTGCTGGTAATCAATTGATATAACATATGACAATAACCCTCCC
CCCTGGACCACTTCGTCGCCAAACAATTGCAGGCTCTAGCGGCCTCCTCT
CGGCCAAGGGCGGAAACGCCTTCCACGAGCGGCTCCATCTCTCGTGGAGG
CTGCATCTGGGGGGGGACTCCCGGGCGGGGGAACATAGGAGCGATCGCAA
ATTCGCCTGTGCGTGGCCGGGCGTTTGCAGGAGACGCGCATATGGTCTTC
TCCCCTCCCCGAAGCGCGACCAGTCCTTTGGATCTCATGGCAGAGGCTGT
TCAGGCACGAGAGCCGGCGCCTCTGTTACAAATACCTCGAGGCGGGAAGG
TTGAGGGCGGCGGCGGTAGTAGGAACAGCAGCCAGGGTCCTTCGAAGAAG
CCTAGGGTCTGATGAGATTTCGAACTTTTGGGCATGTTTGGGAGTTTCAA
GCATATTTTACTTCGTCTTCTTCCAAGATACTGAGTATTTGGTGAAATGT
GTCTAAATATGCCCAGTAGTTCAAAAAGTCCCGAAATGTCGGGCATCAGG
TTTAAGAAAGAGAAGGGGCACACGAGCTCGTGCAGGCGGAGGAGGAGGAG
GGTTGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig10094:334..3539- >mRNA_H-paniculata_contig10094.78.1 ID=mRNA_H-paniculata_contig10094.78.1|Name=mRNA_H-paniculata_contig10094.78.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4806bp|location=Sequence derived from alignment at H-paniculata_contig10094:334..3539- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGACAGGACGAGTGTGGTGCCGAATGAGGAAGGGATGAAGGGGAA
GGGGAACGGTAAGGACAAGTGCAGACGCGAGTCGAGCAAGAAGCCAAACA
AGCCTGAGGAGAACAAACCCGAGCAGCAGAAGCTGGAGGAGCAGGAAACG
AGTGTGCAGCAGAAAGGCAAGCAGGAAGAGGGGGGGGCGACTCCTTCCTC
TGCCGGTGGTGCACTTGCTGCGTTCTCTGATGATGAGATCACCTTGAGCG
CTGCTAAGGTATCGCTGTCGTCTGCCCAGCCCGCGCGTCTCTCGCCTCTA
CGCGGAAAATATAAAGAACAGCAGCAGCAGCAGCAGGAGCAACAGCAGCA
GCAGGAGCAACAGCAGCAACAGCAGCAACTGTCTGTAGTTCTGCCCTCTC
AGCTCGGCAAGAGGCGGCGTACCGAGCAACGTGAGGGCGTAGAACCGACC
CTGCCCAAAAAACGACATGGTGATGATATTTTACTGGGAGAGGATGCTGC
GTTGAGCAAGGCCGAGGAAGCACTCGACGATGGGAACGCCTCTGCACGTA
ACTATGGCGCCATCGCCACCATCACCCCCGCCGGCGCCATTGGTGAGGAC
GGTGGTACCGGCGTGCAAGCGATAGCGAGTGAAGTCGGGGGGCCAGGGTC
GCGCGGCGTGCCGCCGTCCTCGTCGTCAGCGGGAGCGGGCGATGGTACGG
TCGCTGCCAGTGAATCGGGGGAGCCAACGAGTAAGCGACTTCGAGGGGAA
ACACCAGTTGCCGCCGACGGCCGAGGGAAACTAGAAGTACCAGCTGGAGA
GGCTGGAGAAAAAGTCGCCCCTGCTGTTGGCCCACTTGCGGCCTTTCCTG
TTGATGGTAATCCAAAGAGTGCCGTGGGTACCATTGCGCCTTCGGCGGCT
AGTGCTGTCAAGGACGATGGGGCACACTCCGCTGCAGCCGCCGCCACTGA
GGAAAAAAAGAGCGACGCACCAACATCACAGACATCGACGGGATCTGCTG
GAGGAGGTTCTGAGATGGTCACCACCACTTCGTCCGAATCCAGTGCTGCG
TCGATGGAATCTGGGTCGGGCGACAGCAGCGGGAAATCTTCACCTACTGA
GGCTACCCACGATGAAGGTGTCGAGACAGCGATCGCGTTGCCGCATGCGG
TTGGCCTTTCAGCTAAAGGCACGGAGGAGATCAAATCCGTGGCTGTTGTT
GAGAAAACAAGCACAATGGTTCAACCCGTAATGACGGCATCAAAAGAGCA
GGAGCAGCACGGCCCCGGTGGCGTGTCTGATCCCACTGCTACGGAAGCAA
TCGATGGTGGCTCGACTCCGGCTACGATATCAATGGTAGCGCCCGAGCCA
CCATTGGAGAAAACGATATCCCTGATCCCCAACGCCGAATCTGGTGAGGG
CGTCAGCGTGGTGACAAATTCTTCTCCTTGGAGGGGTGGCGTAACCCTAC
ACGGGGCGTCGCCTGCCCCTGCCGTAACGGCGAACGGGGGAGGCTCGAAT
CAGCTGCGAAATCCGCCACGACGAAATAGCAGCGAGACTAACGGAAAGAG
CATCGACGGGGGTGAAGTCAACGATGGTGGCATTAGCAGCAACGACGATG
GCACCGACGGCAGCGACCTCGGCGACCGAGGCAGTGTTACGATGGGAGAC
AAAAGCAGCGCTGAACACTTTGTCTCACCTTCGGGTAAGAAAGCTTCTTT
TTCCAGTGCCCCGGGCAGCCGCGCGTTCATGGATCCGACGGCGACGCATG
CGGTCGACGGGATCCGAGGAAGAGGAGGAGGAGAAGAAGAAGAGAGTGTC
TCGATCGTCGCGGCAGCATCGCAAATTGCCGGACGGAAGAGGACCGCCGC
CGAGCTGGAGGCGGCCGCTGGGCTCGCCATGGGCCAGAAAGGAGTTGGAG
AGGCGATGGCGCGATTTAGCTCGCCGATGGGTCAGCACACCAGCAACGGA
CATGCGACGACAGCGGCGGTAGATAGGTCTAGGGAAAGGTTTGAAGGTGG
CGGTGGCGGAGGTGCGGGTTGTAGCACGCCGCCCGCGCGCGGTATATCAC
CCAAGGGTGCTCTGGATATCATGATGGAAGACAGGACGAGTGTGGTGCCG
AATGAGGAAGGGATGAAGGGGAAGGGGAACGGTAAGGACAAGTGCAGACG
CGAGTCGAGCAAGAAGCCAAACAAGCCTGAGGAGAACAAACCCGAGCAGC
AGAAGCTGGAGGAGCAGGAAACGAGTGTGCAGCAGAAAGGCAAGCAGGAA
GAGGGGGGGGCGACTCCTTCCTCTGCCGGTGGTGCACTTGCTGCGTTCTC
TGATGATGAGATCACCTTGAGCGCTGCTAAGGTATCGCTGTCGTCTGCCC
AGCCCGCGCGTCTCTCGCCTCTACGCGGAAAATATAAAGAACAGCAGCAG
CAGCAGCAGGAGCAACAGCAGCAGCAGGAGCAACAGCAGCAACAGCAGCA
ACTGTCTGTAGTTCTGCCCTCTCAGCTCGGCAAGAGGCGGCGTACCGAGC
AACGTGAGGGCGTAGAACCGACCCTGCCCAAAAAACGACATGGTGATGAT
ATTTTACTGGGAGAGGATGCTGCGTTGAGCAAGGCCGAGGAAGCACTCGA
CGATGGGAACGCCTCTGCACGTAACTATGGCGCCATCGCCACCATCACCC
CCGCCGGCGCCATTGGTGAGGACGGTGGTACCGGCGTGCAAGCGATAGCG
AGTGAAGTCGGGGGGCCAGGGTCGCGCGGCGTGCCGCCGTCCTCGTCGTC
AGCGGGAGCGGGCGATGGTACGGTCGCTGCCAGTGAATCGGGGGAGCCAA
CGAGTAAGCGACTTCGAGGGGAAACACCAGTTGCCGCCGACGGCCGAGGG
AAACTAGAAGTACCAGCTGGAGAGGCTGGAGAAAAAGTCGCCCCTGCTGT
TGGCCCACTTGCGGCCTTTCCTGTTGATGGTAATCCAAAGAGTGCCGTGG
GTACCATTGCGCCTTCGGCGGCTAGTGCTGTCAAGGACGATGGGGCACAC
TCCGCTGCAGCCGCCGCCACTGAGGAAAAAAAGAGCGACGCACCAACATC
ACAGACATCGACGGGATCTGCTGGAGGAGGTTCTGAGATGGTCACCACCA
CTTCGTCCGAATCCAGTGCTGCGTCGATGGAATCTGGGTCGGGCGACAGC
AGCGGGAAATCTTCACCTACTGAGGCTACCCACGATGAAGGTGTCGAGAC
AGCGATCGCGTTGCCGCATGCGGTTGGCCTTTCAGCTAAAGGCACGGAGG
AGATCAAATCCGTGGCTGTTGTTGAGAAAACAAGCACAATGGTTCAACCC
GTAATGACGGCATCAAAAGAGCAGGAGCAGCACGGCCCCGGTGGCGTGTC
TGATCCCACTGCTACGGAAGCAATCGATGGTGGCTCGACTCCGGCTACGA
TATCAATGGTAGCGCCCGAGCCACCATTGGAGAAAACGATATCCCTGATC
CCCAACGCCGAATCTGGTGAGGGCGTCAGCGTGGTGACAAATTCTTCTCC
TTGGAGGGGTGGCGTAACCCTACACGGGGCGTCGCCTGCCCCTGCCGTAA
CGGCGAACGGGGGAGGCTCGAATCAGCTGCGAAATCCGCCACGACGAAAT
AGCAGCGAGACTAACGGAAAGAGCATCGACGGGGGTGAAGTCAACGATGG
TGGCATTAGCAGCAACGACGATGGCACCGACGGCAGCGACCTCGGCGACC
GAGGCAGTGTTACGATGGGAGACAAAAGCAGCGCTGAACACTTTGTCTCA
CCTTCGGGTAAGAAAGCTTCTTTTTCCAGTGCCCCGGGCAGCCGCGCGTT
CATGGATCCGACGGCGACGCATGCGGTCGACGGGATCCGAGGAAGAGGAG
GAGGAGAAGAAGAAGAGAGTGTCTCGATCGTCGCGGCAGCATCGCAAATT
GCCGGACGGAAGAGGACCGCCGCCGAGCTGGAGGCGGCCGCTGGGCTCGC
CATGGGCCAGAAAGGAGTTGGAGAGGCGATGGCGCGATTTAGCTCGCCGA
TGGGTCAGCACACCAGCAACGGACATGCGACGACAGCGGCGGTAGATAGG
TCTAGGGAAAGGTTTGAAGGTGGCGGTGGCGGAGGTGCGGGTTGTAGCAC
GCCGCCCGCGCGCGGTATATCACCCAAGGGTGCTCTGGATATCATGGCTC
TAGCGGCCTCCTCTCGGCCAAGGGCGGAAACGCCTTCCACGAGCGGCTCC
ATCTCTCGTGGAGGCTGCATCTGGGGGGGGACTCCCGGGCGGGGGAACAT
AGGAGCGATCGCAAATTCGCCTGTGCGTGGCCGGGCGTTTGCAGGAGACG
CGCATATGGTCTTCTCCCCTCCCCGAAGCGCGACCAGTCCTTTGGATCTC
ATGGCAGAGGCTGTTCAGGCACGAGAGCCGGCGCCTCTGTTACAAATACC
TCGAGGCGGGAAGGTTGAGGGCGGCGGCGGTAGTAGGAACAGCAGCCAGG
GTCCTTCGAAGAAGCCTAGGGTCTGAGCTCTAGCGGCCTCCTCTCGGCCA
AGGGCGGAAACGCCTTCCACGAGCGGCTCCATCTCTCGTGGAGGCTGCAT
CTGGGGGGGGACTCCCGGGCGGGGGAACATAGGAGCGATCGCAAATTCGC
CTGTGCGTGGCCGGGCGTTTGCAGGAGACGCGCATATGGTCTTCTCCCCT
CCCCGAAGCGCGACCAGTCCTTTGGATCTCATGGCAGAGGCTGTTCAGGC
ACGAGAGCCGGCGCCTCTGTTACAAATACCTCGAGGCGGGAAGGTTGAGG
GCGGCGGCGGTAGTAGGAACAGCAGCCAGGGTCCTTCGAAGAAGCCTAGG
GTCTGA back to top
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