mRNA_H-paniculata_contig1009.71.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1009.71.1 vs. uniprot
Match: A0A6H5J9Z8_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z8_9PHAE) HSP 1 Score: 108 bits (271), Expect = 3.160e-22 Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 97 VVRNAWDGVFTPPNISASFASAGIFPIDKERVINRLSGRGSKRKERSLDQPPLADLPVVVNGDHIRNSLGRRAEINLLANGHSITGLRMNTVFFGAYLQEKERKVHP 417 V+ AW FTP ASFA AG++P+DKER ++RL KRKER D+PPL D+P+ V+ D + LG RA LL GH++TGLR++TVF G YL K K P Sbjct: 160 VIGQAWSTSFTPDINKASFAGAGLWPVDKERALSRLLK--PKRKERETDRPPLQDVPIAVSNDRLEELLGERAVRKLLGEGHTLTGLRVSTVFLGDYLPSKRSKKPP 264
BLAST of mRNA_H-paniculata_contig1009.71.1 vs. uniprot
Match: A0A6H5JKQ8_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ8_9PHAE) HSP 1 Score: 108 bits (271), Expect = 8.840e-22 Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 97 VVRNAWDGVFTPPNISASFASAGIFPIDKERVINRLSGRGSKRKERSLDQPPLADLPVVVNGDHIRNSLGRRAEINLLANGHSITGLRMNTVFFGAYLQEKERKVHP 417 V+ AW FTP ASFA AG++P+DKER ++RL KRKER D+PPL D+P+ V+ D + LG RA LL GH++TGLR++TVF G YL K K P Sbjct: 236 VIGQAWSTSFTPDINKASFAGAGLWPVDKERALSRLLK--PKRKERETDRPPLQDVPIAVSNDRLEELLGERAVRKLLGEGHTLTGLRVSTVFLGDYLPSKRSKKPP 340
BLAST of mRNA_H-paniculata_contig1009.71.1 vs. uniprot
Match: A0A6H5JE34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE34_9PHAE) HSP 1 Score: 108 bits (271), Expect = 1.350e-21 Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 97 VVRNAWDGVFTPPNISASFASAGIFPIDKERVINRLSGRGSKRKERSLDQPPLADLPVVVNGDHIRNSLGRRAEINLLANGHSITGLRMNTVFFGAYLQEKERKVHP 417 V+ AW FTP ASFA AG++P+DKER ++RL KRKER D+PPL D+P+ V+ D + LG RA LL GH++TGLR++TVF G YL K K P Sbjct: 179 VIGQAWSTSFTPDINKASFAGAGLWPVDKERALSRLLK--PKRKERETDRPPLQDVPIAVSNDRLEELLGERAVRKLLGEGHTLTGLRVSTVFLGDYLPSKRSKKPP 283
BLAST of mRNA_H-paniculata_contig1009.71.1 vs. uniprot
Match: A0A6H5KH00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH00_9PHAE) HSP 1 Score: 108 bits (271), Expect = 2.120e-21 Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 97 VVRNAWDGVFTPPNISASFASAGIFPIDKERVINRLSGRGSKRKERSLDQPPLADLPVVVNGDHIRNSLGRRAEINLLANGHSITGLRMNTVFFGAYLQEKERKVHP 417 V+ AW FTP ASFA AG++P+DKER ++RL KRKER D+PPL D+P+ V+ D + LG RA LL GH++TGLR++TVF G YL K K P Sbjct: 280 VIGQAWSTSFTPDINKASFAGAGLWPVDKERALSRLLK--PKRKERETDRPPLQDVPIAVSNDRLEELLGERAVRKLLGEGHTLTGLRVSTVFLGDYLPSKRSKKPP 384
BLAST of mRNA_H-paniculata_contig1009.71.1 vs. uniprot
Match: A0A6H5JS97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS97_9PHAE) HSP 1 Score: 108 bits (271), Expect = 3.470e-21 Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 97 VVRNAWDGVFTPPNISASFASAGIFPIDKERVINRLSGRGSKRKERSLDQPPLADLPVVVNGDHIRNSLGRRAEINLLANGHSITGLRMNTVFFGAYLQEKERKVHP 417 V+ AW FTP ASFA AG++P+DKER ++RL KRKER D+PPL D+P+ V+ D + LG RA LL GH++TGLR++TVF G YL K K P Sbjct: 360 VIGQAWSTSFTPDINKASFAGAGLWPVDKERALSRLLK--PKRKERETDRPPLQDVPIAVSNDRLEELLGERAVRKLLGEGHTLTGLRVSTVFLGDYLPSKRSKKPP 464
BLAST of mRNA_H-paniculata_contig1009.71.1 vs. uniprot
Match: A0A6H5L436_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L436_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 4.650e-16 Identity = 49/136 (36.03%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 19 VTLLPHPHHFSRDKWDADA---GEERHSR----VVRNAWDGVFTPPNISASFASAGIFPIDKERVINRLSGRGSKRKERSLDQPPLADLPVVVNGDHIRNSLGRRAEINLLANGHSITGLRMNTVFFGAYLQEKER 405 + LL P H S D G + R V+ AW TP ASFA AG++P+D +R + RL G +KRKE +PPL D+P+ ++ + + ++G R L A GH+ITGL++ TV G L +++R Sbjct: 108 IMLLQLPSHTSHTTQPLDVVAFGTFKEERDVPGVIAAAWQMSLTPERNKASFARAGLWPVDMDRALTRLQGT-AKRKEGPTGRPPLEDVPIAMSHEQLEEAIGERGLRQLKAGGHTITGLKVGTVMLGGLLTQRKR 242
BLAST of mRNA_H-paniculata_contig1009.71.1 vs. uniprot
Match: A0A6H5KWY0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWY0_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 9.150e-16 Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 97 VVRNAWDGVFTPPNISASFASAGIFPIDKERVINRLSGRGSKRKERSLDQPPLADLPVVVNGDHIRNSLGRRAEINLLANGHSITGLRMNTVFFGAYLQEKERK 408 ++ AW FTP ASFA AG++P+DKER + L + KRK R D+P L D+P+VV+ + + LG R A GH+I G+R++TV G YL K Sbjct: 104 LIGQAWSTSFTPEINQASFAGAGLWPVDKERALTLL--QRPKRKAREADRPSLQDVPIVVSNEQLEELLGERGVHKARAEGHTIPGIRVSTVLLGPYLPNNRPK 205
BLAST of mRNA_H-paniculata_contig1009.71.1 vs. uniprot
Match: A0A6H5KJB5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB5_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 9.430e-16 Identity = 44/104 (42.31%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 97 VVRNAWDGVFTPPNISASFASAGIFPIDKERVINRLSGRGSKRKERSLDQPPLADLPVVVNGDHIRNSLGRRAEINLLANGHSITGLRMNTVFFGAYLQEKERK 408 ++ AW FTP ASFA AG++P+DKER + RL + KRK R D+P L D+P+VV+ + + LG R A GH+I G+R++TV G YL K Sbjct: 337 LIGQAWSMTFTPEINKASFAGAGLWPVDKERALTRL--QRPKRKAREADRPSLQDVPIVVSNEQLEELLGERGVHKARAEGHTIPGVRVSTVLLGLYLPNNRPK 438
BLAST of mRNA_H-paniculata_contig1009.71.1 vs. uniprot
Match: A0A6H5KF88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF88_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 1.030e-15 Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 109 AWDGVFTPPNISASFASAGIFPIDKERVINRLSGRGSKRKERSLDQPPLADLPVVVNGDHIRNSLGRRAEINLLANGHSITGLRMNTVFFGAYLQEKERK 408 AW FTP ASFA AG++P+D+ER ++RL KRK D+PPLAD+P+ V + + +G R L A GH+ITGLR++TV G +L K ++ Sbjct: 82 AWGPSFTPEINQASFAGAGLWPVDRERALSRLLR--PKRKVTETDRPPLADVPIAVTNERLEELIGDRGVRALRAKGHTITGLRVSTVVLGNFLPSKNKR 179
BLAST of mRNA_H-paniculata_contig1009.71.1 vs. uniprot
Match: A0A6H5JTM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM4_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 2.100e-15 Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 97 VVRNAWDGVFTPPNISASFASAGIFPIDKERVINRLSGRGSKRKERSLDQPPLADLPVVVNGDHIRNSLGRRAEINLLANGHSITGLRMNTVFFGAYL 390 V+ AW FTP ASFA AG++P+D +R + RL G+ +KRKE +PPL D+P+ + + + ++G R L A GH+ITGL++ TV G L Sbjct: 271 VMAAAWQRSFTPERNKASFAGAGLWPVDMDRALTRLQGK-AKRKEGPTGRPPLEDVPIAMTHEQLDEAIGERGLRQLKAGGHAITGLKVGTVMLGGLL 367 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1009.71.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1009.71.1 >prot_H-paniculata_contig1009.71.1 ID=prot_H-paniculata_contig1009.71.1|Name=mRNA_H-paniculata_contig1009.71.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp PPVPATVTLLPHPHHFSRDKWDADAGEERHSRVVRNAWDGVFTPPNISASback to top mRNA from alignment at H-paniculata_contig1009:1701..3658+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1009.71.1 ID=mRNA_H-paniculata_contig1009.71.1|Name=mRNA_H-paniculata_contig1009.71.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1958bp|location=Sequence derived from alignment at H-paniculata_contig1009:1701..3658+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1009:1701..3658+ >mRNA_H-paniculata_contig1009.71.1 ID=mRNA_H-paniculata_contig1009.71.1|Name=mRNA_H-paniculata_contig1009.71.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1020bp|location=Sequence derived from alignment at H-paniculata_contig1009:1701..3658+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |