mRNA_H-paniculata_contig1008.61.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1008.61.1 vs. uniprot
Match: A0A6H5KFQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ9_9PHAE) HSP 1 Score: 135 bits (341), Expect = 1.320e-34 Identity = 76/160 (47.50%), Postives = 104/160 (65.00%), Query Frame = 2 Query: 200 SYPVLKKIKAVEYSRTISP-DRLAVGNTCAPRVLNMHKKRMIEWCKSEEQLKAQVKGT-KSAGSLQSNNRGRAASSAEVEEDMCEWINHNRQLSRGVGRREVLNKLLQLKPNAFGGLPSSDDTAKMEQFNNKLHKWYAQFRKRNRFSIRRRASVGQKLPQ 673 SYP+ K+KA Y+R I P D VGN +VL + +KR+IEW K EEQL+ +V K + + Q + G+A++ E+ + ++IN R+ RG G REV+NKLLQLKP+A GG+P++ + F K + WY QFRKRN FSIRRR SVGQKLP+ Sbjct: 85 SYPIRFKLKAAAYTREICPCDGQPVGNNGGAKVLQVPRKRIIEWLKQEEQLREKVSANPKLSKAKQVPSGGKASTVDAAEQALVDYINEQRKQHRGCGNREVINKLLQLKPDALGGMPANAKPEEALAFKIKFNSWYQQFRKRNGFSIRRRTSVGQKLPK 244
BLAST of mRNA_H-paniculata_contig1008.61.1 vs. uniprot
Match: A0A6H5KI61_9PHAE (BrkDBD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI61_9PHAE) HSP 1 Score: 132 bits (332), Expect = 2.200e-33 Identity = 75/176 (42.61%), Postives = 105/176 (59.66%), Query Frame = 2 Query: 146 VPRTLPQDGEGGGQRERESYPVLKKIKAVEYSRTISP-DRLAVGNTCAPRVLNMHKKRMIEWCKSEEQLKAQVKGTKSAGSLQSNNRGRAASSAEVEEDMCEWINHNRQLSRGVGRREVLNKLLQLKPNAFGGLPSSDDTAKMEQFNNKLHKWYAQFRKRNRFSIRRRASVGQKLP 670 + R+ P G+G SYP+ K+ A Y+R I P D VGN A +VL + +KR+IEW K EEQL+ +V + + G AS+ + E+ + + IN R+ RG G REV+NKLL+LKP+A GG+ ++ + F K + WY +FRKRN FSIRRR SVG+KLP Sbjct: 97 IKRSGPVGGKG-------SYPIRFKLNAAAYTREICPCDGQPVGNNGAAKVLQVPRKRIIEWLKQEEQLREKVSANPKLWKAKQVHSGGKASTVDAEQSLVDHINEQRKQHRGCGNREVMNKLLELKPDALGGMAANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRVSVGEKLP 265
BLAST of mRNA_H-paniculata_contig1008.61.1 vs. uniprot
Match: A0A6H5KJN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN9_9PHAE) HSP 1 Score: 134 bits (337), Expect = 5.570e-33 Identity = 72/159 (45.28%), Postives = 100/159 (62.89%), Query Frame = 2 Query: 200 SYPVLKKIKAVEYSRTISP-DRLAVGNTCAPRVLNMHKKRMIEWCKSEEQLKAQVKGTKSAGSLQSNNRGRAASSAEVEEDMCEWINHNRQLSRGVGRREVLNKLLQLKPNAFGGLPSSDDTAKMEQFNNKLHKWYAQFRKRNRFSIRRRASVGQKLPQ 673 SYP+ K+ A Y+R I P D VGN A +VL + +KR+IEW K EEQL+ +V + + G AS+ + E+ + ++IN R+ RG G REV+NKLL+LKP+A GG+P++ + F + WY +FRKRN FSIRRR SVGQKLP+ Sbjct: 23 SYPIRFKLNAAAYTREICPCDGQPVGNNGAAKVLQVPRKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQVLVDYINEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVNFNPWYQRFRKRNGFSIRRRTSVGQKLPK 181
BLAST of mRNA_H-paniculata_contig1008.61.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 130 bits (328), Expect = 3.430e-31 Identity = 71/159 (44.65%), Postives = 98/159 (61.64%), Query Frame = 2 Query: 200 SYPVLKKIKAVEYSRTISP-DRLAVGNTCAPRVLNMHKKRMIEWCKSEEQLKAQVKGTKSAGSLQSNNRGRAASSAEVEEDMCEWINHNRQLSRGVGRREVLNKLLQLKPNAFGGLPSSDDTAKMEQFNNKLHKWYAQFRKRNRFSIRRRASVGQKLPQ 673 SYP+ K+ A Y+R I P D VGN A ++L + KR+IEW K EEQL+ +V + G AS+ + E+ + ++IN R+ RG G REV +KLL+LKP+A GG+P++ + F K + WY +FRKRN FSIRRR SVGQKLP+ Sbjct: 35 SYPIRFKLNAAVYTREICPYDGQPVGNNGAAKLLQVPGKRIIEWLKQEEQLREKVSANPKLSKAKQVQSGGKASTVDTEQALVDYINEQRKQHRGCGNREVTSKLLELKPDALGGMPANTKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPK 193
BLAST of mRNA_H-paniculata_contig1008.61.1 vs. uniprot
Match: A0A6H5JVM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVM1_9PHAE) HSP 1 Score: 122 bits (307), Expect = 1.760e-30 Identity = 72/169 (42.60%), Postives = 101/169 (59.76%), Query Frame = 2 Query: 155 TLPQDGEGGGQRERESYPVLKKIKAVEYSRTISPDRLAVGNTCAPRVLNMHKKRMIEWCKSEEQLKAQVKGTKSAGSLQSNNRGRAASSAEVEEDMCEWINHNRQLSRGVGRREVLNKLLQLKPNAFGGLPSSDDTAKMEQFNNKLHKWYAQFRKRNRFSIRRRASVGQ 661 + + G GG R SY K+KA E++R + D VGNT A +VL + KKR+I W K E +LK ++ +S N G AAS+A+V++ + ++IN R+ RG G EV+NKLL++K +A GGL + T + QF NK + WY +FR R SIRRR SVGQ Sbjct: 53 AVDRSGAVGG---RGSYSNAFKVKAAEFTRALCEDGKPVGNTGAAKVLGVSKKRIIAWVKEEGKLKGLIQAKPKLSKAKSLNVGVAASTADVDQALEDYINEKRKQHRGCGNAEVMNKLLEIKADALGGLGPTATTEEALQFRNKFNGWYKRFRARRGHSIRRRTSVGQ 218
BLAST of mRNA_H-paniculata_contig1008.61.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 126 bits (316), Expect = 1.580e-29 Identity = 70/159 (44.03%), Postives = 97/159 (61.01%), Query Frame = 2 Query: 200 SYPVLKKIKAVEYSRTISP-DRLAVGNTCAPRVLNMHKKRMIEWCKSEEQLKAQVKGTKSAGSLQSNNRGRAASSAEVEEDMCEWINHNRQLSRGVGRREVLNKLLQLKPNAFGGLPSSDDTAKMEQFNNKLHKWYAQFRKRNRFSIRRRASVGQKLPQ 673 SYP+ K+ A Y+R I P D VGN A VL + KR+IEW K EEQL+ +V + + G AS+ + E+ + +++N R+ R G REV+NKLL+LKP+A GG+ ++ + F K + WY +FRKRN FSIRRR SVGQKLP+ Sbjct: 82 SYPIRFKLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPK 240
BLAST of mRNA_H-paniculata_contig1008.61.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.090e-28 Identity = 68/157 (43.31%), Postives = 97/157 (61.78%), Query Frame = 2 Query: 200 SYPVLKKIKAVEYSRTISPDRLAVGNTCAPRVLNMHKKRMIEWCKSEEQLKAQVKGTKSAGSLQSNNRGRAASSAEVEEDMCEWINHNRQLSRGVGRREVLNKLLQLKPNAFGGLPSSDDTAKMEQFNNKLHKWYAQFRKRNRFSIRRRASVGQKLP 670 SYP+ K+KAV ++R + D VGN+ A +VL + ++R+I W E +K VK +S + G A +AEVE+D+ ++IN R+ RG G EV+NKLL+LKP+A GGL ++ + F K WY +FR+R+ SIRRR SVGQKLP Sbjct: 74 SYPMRFKLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLP 230
BLAST of mRNA_H-paniculata_contig1008.61.1 vs. uniprot
Match: A0A6H5JYC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC3_9PHAE) HSP 1 Score: 114 bits (284), Expect = 1.420e-27 Identity = 59/134 (44.03%), Postives = 84/134 (62.69%), Query Frame = 2 Query: 272 GNTCAPRVLNMHKKRMIEWCKSEEQLKAQVKGTKSAGSLQSNNRGRAASSAEVEEDMCEWINHNRQLSRGVGRREVLNKLLQLKPNAFGGLPSSDDTAKMEQFNNKLHKWYAQFRKRNRFSIRRRASVGQKLPQ 673 G P VL + +KR+IEW K EEQL+ ++ + + G AS+ + E+ + ++IN R+ RG G REV+NKLL+LKP+A GG+P++ + F K + WY +F KRN FSIRRR SVGQKLP+ Sbjct: 32 GKGATPSVLQVPRKRIIEWLKQEEQLREKISANPELSKAKQVHSGGKASTVDAEQALVDYINKQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFGKRNGFSIRRRNSVGQKLPK 165
BLAST of mRNA_H-paniculata_contig1008.61.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 120 bits (302), Expect = 1.560e-27 Identity = 72/179 (40.22%), Postives = 108/179 (60.34%), Query Frame = 2 Query: 152 RTLPQDG----EGGGQRERESYPVLKKIKAVEYSRTISPDRLAVGNTCAPRVLNMHKKRMIEWCKSEEQLKAQVKGT-KSAGSLQSNNRGRAASSAEVEEDMCEWINHNRQLSRGVGRREVLNKLLQLKPNAFGGLPSSDDTAKMEQFNNKLHKWYAQFRKRNRFSIRRRASVGQKLPQ 673 R P+ G G ++ YPV K+K V ++R + D GN+ A +VL++ ++R++EW + EE L+A+V K + + Q + RG+A S A++EE + E+IN R+ G G +NKLL+LKP+A GGL + + N+K WY +F KRN+FSIRRR SVGQKLP+ Sbjct: 35 RKYPEPGFPSETSGAVGKKRGYPVGFKLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKA-SRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPK 212
BLAST of mRNA_H-paniculata_contig1008.61.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 114 bits (286), Expect = 1.570e-25 Identity = 61/134 (45.52%), Postives = 85/134 (63.43%), Query Frame = 2 Query: 272 GNTCAPRVLNMHKKRMIEWCKSEEQLKAQVKGTKSAGSLQSNNRGRAASSAEVEEDMCEWINHNRQLSRGVGRREVLNKLLQLKPNAFGGLPSSDDTAKMEQFNNKLHKWYAQFRKRNRFSIRRRASVGQKLPQ 673 G P L + +KR+IEW K E QL+ +V + + G AS+ + E+ + ++IN R+L RG G REV+NKLL+LKP+A GG+P++ + F K + WY +FRKRN FSIRRRASVGQKLP+ Sbjct: 79 GKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPK 212 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1008.61.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1008.61.1 >prot_H-paniculata_contig1008.61.1 ID=prot_H-paniculata_contig1008.61.1|Name=mRNA_H-paniculata_contig1008.61.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bp MHKKRMIEWCKSEEQLKAQVKGTKSAGSLQSNNRGRAASSAEVEEDMCEWback to top mRNA from alignment at H-paniculata_contig1008:24369..25101+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1008.61.1 ID=mRNA_H-paniculata_contig1008.61.1|Name=mRNA_H-paniculata_contig1008.61.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=733bp|location=Sequence derived from alignment at H-paniculata_contig1008:24369..25101+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1008:24369..25101+ >mRNA_H-paniculata_contig1008.61.1 ID=mRNA_H-paniculata_contig1008.61.1|Name=mRNA_H-paniculata_contig1008.61.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=864bp|location=Sequence derived from alignment at H-paniculata_contig1008:24369..25101+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |