mRNA_H-paniculata_contig10075.57.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10075.57.1
Unique NamemRNA_H-paniculata_contig10075.57.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig10075.57.1 vs. uniprot
Match: D7G1I2_ECTSI (PsbB mRNA maturation factor Mbb1, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I2_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 2.850e-52
Identity = 139/343 (40.52%), Postives = 173/343 (50.44%), Query Frame = 1 
Query:  118 RARGLLKMARPKVAITTALGELEASQGNLEEARRVFQEGLDRLATIPNPGQARNG---------KWIGPG-RVARGWQEIA--AEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFEMRRGHNEQARLILSNAADLPQKQGDLFNMWATLEAKEGNLQTALKIAEAAIERFPDDMSLLQTQGTVLGRLGKYAAAVDCYRRSIAFRPAAPAYVAWALVVSKLAFRKEAKRKDKEASSKSHELLLLRASFRPSLAPLCRYNIML------VKQGDGGHVSIGSG----EDIKIESEYEGVKISHAEARRLFELGMKFTPGHGPLYNAYG 1080
            RAR +L+ +R  VAI+ AL EL A+ G +EE R + Q+ +DRL    +    R+G          W   G R  +   E A  A+                                             RFEMRRG+   AR+ LS AA+LPQ+ G LF+MWATLE KEGNL+TALKIAEAA  RFP D  LLQT GTV G+LG+Y  A++CYRRSIA  PAAPAYVAWALVV+KLA R E     K+ ++     ++        +        +L      V  G GG      G    E     +E E    S+ EARRLFELG+   P HGPLYNAYG
Sbjct:  253 RAREILEGSRQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGGGGSPDPSAAWAAAGDRPKKRSAEEAEDADQGVTALLMAWANFEESRGNEKRSLELMAKAMENEPDNARARVGRARFEMRRGNMRDARIFLSEAANLPQEDGTLFSMWATLEIKEGNLETALKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGPKYGVVAGDPVVEYVGDASDDGTILGEASDAVAGGSGGTADENDGXXXXEGGVSRTEEEEGPPSYEEARRLFELGILADPTHGPLYNAYG 595
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BLAST of mRNA_H-paniculata_contig10075.57.1 vs. uniprot
Match: A0A6H5L0Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y9_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 3.260e-28
Identity = 127/416 (30.53%), Postives = 164/416 (39.42%), Query Frame = 1 
Query:    1 FGDHDRARALFQKGLEADNGNPFVCHAWGLMEEKEGNFNRARGLLKMARPKVAITTALGELEASQGNLEEARRVFQEGLDRLATIPNPGQARNGKWIGPGRVARGWQEIAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFEMRRGHNEQARLILSNAADLPQKQGDLFNMWATLEAKEGNLQTA-------------------------------------------LKIAEAAIERFPDDMSLLQTQGTVLGRLGKYAAAVDCYRRSIAFRPAAPAYVAWALVVSKLAFRKEAKRKDKEASSKSHELLLLRASFRPSLAPLCRYNIMLVKQGDGGHVSIGSG-------------EDIKIESEYEGVKISHAEARRLFELGMKFTPGHGPLYNAYG 1080
            FGD  +AR  F  GLEAD G         L    +G+           R  VAI+ AL EL A+ G +EE R + Q+ +DRL    +    R+G    P   A  W   AA G                                             FE  RG+ ++A  +++ A +         N      A+ G  +                                             LKIAEAA  RFP D  LLQT GTV G+LG+Y  A++CYRRSIA  PAAPAYVAWALVV+KLA R E     KE ++   + ++        +        +L +  D   V+ GSG               +    E EG   S+ EARRLFELG+   P HGPLYNAYG
Sbjct:  304 FGDCAKARISFSNGLEADPGRMRYSSPTFLPSYSQGS-----------RQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGGEGSPDPSAA-W---AAAGDRPKKRSAEEAEDSDQGLTALLMAWA------------------NFEESRGNEKRALELMAKAME---------NEPDNARARVGRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKETAAGQEQDVVAGDPVVEYVGDASDDGTILGEASDA--VAGGSGGTAAEXXXXXXXXXGVSRTEEEEGPP-SYEEARRLFELGILADPTHGPLYNAYG 674
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BLAST of mRNA_H-paniculata_contig10075.57.1 vs. uniprot
Match: A0A7S2DH37_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DH37_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.340e-15
Identity = 61/179 (34.08%), Postives = 79/179 (44.13%), Query Frame = 1 
Query:  550 GDLFNMWATLEAKE--GNLQTALKIAEAAIERFPDDMSLLQTQGTVLGRLGKYAAAVDCYRRSIAFRPAAPAYVAWALVVSKLAFRKEAKRKDKEASSKSHELLLLRASFRPSLAPLCRYNIMLVKQGDGGHVSIGSGEDIKIESEYEGVKISHAEARRLFELGMKFTPGHGPLYNAYG 1080
            G LFN    +E K+   NL  ++++ E A+E+FP D SL QT GTVL R G    A   ++RS   +P+APAYVAW L+  +                  H +                                       I+ E +  KI   EARRLFELG+K  P HGPLYNAYG
Sbjct:  224 GTLFNARVAIELKDIPPNLNKSVELLEEAVEKFPADHSLHQTFGTVLERTGDIPRARKAFKRSTTLKPSAPAYVAWGLMEER------------------HHM---------------------------------------IQGEKQKGKIRVVEARRLFELGIKADPSHGPLYNAYG 345
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BLAST of mRNA_H-paniculata_contig10075.57.1 vs. uniprot
Match: A0A1Z5JWF6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWF6_FISSO)

HSP 1 Score: 80.5 bits (197), Expect = 9.080e-13
Identity = 76/265 (28.68%), Postives = 108/265 (40.75%), Query Frame = 1 
Query:   13 DRARALFQKGLEADNGNPFVCHAWGLMEEKEGNFNRARGLLKMARPK---VAITTALGELEASQGNLEEARRVFQEGLDRLATIPNPGQARNGKWIGPGRVARGWQEIA----AEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFEMRRGHNEQA--RLILSNAADLPQKQGDLFNMWATLEAKEGNLQTALKIAEAAIERFPDDMSLLQTQGTVLGRLGKYAAAVDCYRRSIAFRPAAPAYVAWALV 780
            DRA+ LF + LE D  NP+VCHA+GL+ EK  N   A  L + A  K    A+  +LG    +Q    +AR+++ E L+++ +     +           +A  W E        G                                            R    R   EQA    I  +AAD     G +FN  A++E K   L++A +I    +E  P D SLLQ  G V  R+G Y  A   YR S+  +P+AP  VA AL+
Sbjct:  174 DRAKELFGRALELDPYNPYVCHAYGLLLEKN-NVTAAVNLWQHALEKKSTAALVCSLGTAYIAQEEYGKARKLYAEHLNKIPSDRERTEVA---------LASAWLEERYFSNINGARQLLTESLRNATTSASLVQVAMARFEGRRKNERVTPYTSEGGIRKNAERRKLEQACEMNIQDSAAD-----GRVFNALASIEVKARRLKSARQILNRGLELHPKDYSLLQAAGKVEERMGNYTGARTLYRSSLCIQPSAPCLVAIALL 423
[Close]
BLAST of mRNA_H-paniculata_contig10075.57.1 vs. uniprot
Match: A0A1E7ERC4_9STRA (TPR-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERC4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.470e-12
Identity = 76/266 (28.57%), Postives = 111/266 (41.73%), Query Frame = 1 
Query:    1 FGDHDRARALFQKGLEADNGNPFVCHAWGLMEEKEGNFNRARGLLKMA--RPKVAITTAL----GELEASQGNLEEARRVFQEGLDRLATIPNPGQARNGKWIGPGRVARGWQEIAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFEMRRGHNEQARLILSNAADLPQKQGDLFNMWATLEAKEGNLQTALKIAEAAIERFPDDMSLLQTQGTVLGRLGKYAAAVDCYRRSIAFRPAAPAYVAWALV 780
             G +DRAR LF++ LE +  N +VCHA+ +ME+K GN  +A  LLK A   P   +T AL    GE   ++GNL  AR +++  LD      +  +           +A  W E    G                                     XXXXXXX                S   +     G +FN  A+LE K+ N + A  + +  ++ +P D +L    G V  R+G   +A D Y  S+   P+AP  VA+AL+
Sbjct:   85 LGSYDRARELFERALELEPYNTYVCHAYSIMEKKLGNTEKAVSLLKQALNAPYGTVTAALVCSLGEFYVAEGNLTSARDLYKYHLDHATGKKDRVEVY---------LAAAWLEERNFGELHKARELLNKALVISPTSSLANVALARLKGRISATAXXXXXXXXXXXXXXXXXXXXXKSSRTNE----DGRVFNALASLEVKQRNFKEARDVLQKGMDLYPLDHNLFTAAGKVEERVGNCTSARDFYSESLRLEPSAPTLVAFALL 337
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BLAST of mRNA_H-paniculata_contig10075.57.1 vs. uniprot
Match: A0A448Z6G4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6G4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 7.580e-10
Identity = 78/320 (24.38%), Postives = 115/320 (35.94%), Query Frame = 1 
Query:    4 GDHDRARALFQKGLEADNGNPFVCHAWGLMEEKEGNFNRARGLLK--MARPKVAITTAL----GELEASQGNLEEARRVFQEGLDRLATIPNP--GQARNGK--------------------WIGPGRVA--RGWQEIAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFEMRRGHNEQARLILS-----------------------NAADLPQKQGDL--------FNMWATLEAKEGNLQTALKIAEAAIERFPDDMSLLQTQGTVLGRLGKYAAAVDCYRRSIAFRPAAPAYVAWALV 780
            GD  RAR LF++ +E D+ NPFV HA+ LME + G    A  LLK  +  P   +T AL    GE+  S GNL EAR +++  +D +    +   G + + K                    W+     +  R  Q++  +                                                 R    E+A +  +                       NA   PQ  G +        FN  ATLE K    + A ++    ++ +P D +L    G V  RLG Y  A D Y  S+   P+AP  VA+AL+
Sbjct:  274 GDLIRARELFEECIEIDSYNPFVAHAYSLMERQLGRDGAAISLLKHVLEAPSAKVTAALVCTLGEIYISAGNLTEARDLYKHHIDAVENYSSSAVGGSMDRKRRRRHLPTEKDRVEVYLAAAWLEERHFSELRSAQDLLRKALAISPTSSLANVALARLEGRIQAGDLSLEGQTPSSSSPRGTKQRSRVRRHNSTEEANIATAKRLATICDELHQRGTESKKRQQKNAKHNPQHDGKIAANEDGRVFNALATLEVKRRRFKEAQEVLRKGMDLYPFDHNLFTAAGKVEERLGNYTRARDMYMESLRLEPSAPTLVAFALL 593
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BLAST of mRNA_H-paniculata_contig10075.57.1 vs. uniprot
Match: A0A7S4ERE6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ERE6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 3.200e-9
Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 1 
Query:    4 GDHDRARALFQKGLEADNGNPFVCHAWGLMEEKEGNFNRARGLLKM------ARPKVAITTALGELEASQGNLEEARRVFQEGLDRLATIPNPG 267
            GD  RAR LF++ L+ D+ NP+VCHA+GLME+  G    A  LLK       A+   A+   LGE+  S GNL EAR +++  +D +      G
Sbjct:  274 GDLPRARELFEECLDIDSHNPYVCHAYGLMEKHLGRDAAAISLLKQVLEAPSAKVTAALVCTLGEIHISAGNLAEARDLYKHHIDIIENFSPDG 367
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BLAST of mRNA_H-paniculata_contig10075.57.1 vs. uniprot
Match: A0A7S2RLM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RLM4_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.270e-8
Identity = 34/77 (44.16%), Postives = 43/77 (55.84%), Query Frame = 1 
Query:  550 GDLFNMWATLEAKEGNLQTALKIAEAAIERFPDDMSLLQTQGTVLGRLGKYAAAVDCYRRSIAFRPAAPAYVAWALV 780
            G LFN+WA LE   G L TA  I    I  FP+D  LLQ  G V  RLG Y  A + Y  S+   P+AP  +A+A++
Sbjct:  190 GRLFNVWAKLEVNVGGLNTARNILRKGISLFPNDQRLLQAAGKVEERLGNYTGARELYGASLHLEPSAPTVIAYAML 266
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BLAST of mRNA_H-paniculata_contig10075.57.1 vs. uniprot
Match: A0A7S1EU19_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EU19_9RHOD)

HSP 1 Score: 64.3 bits (155), Expect = 1.510e-7
Identity = 39/104 (37.50%), Postives = 55/104 (52.88%), Query Frame = 1 
Query:  472 RFEMRRGHNEQA-RLILSNAADLPQKQGDLFNMWATLEAKEGNLQTALKIAEAAIERFPDDMSLLQTQGTVLGRLGKYAAAVDCYRRSIAFRPAAPAYVAWALV 780
            RF+ R G  + A   +  +     Q   +++N WATLEA+ GN+  A ++   A E +P D SLL T G V  +   Y AA D YRRS    P +   V+WAL+
Sbjct:  315 RFQARHGTVQAAVESLRESCLGREQATSNVYNGWATLEARAGNINRARELLREAHEMYPSDSSLLHTWGDVEQKDKNYEAARDLYRRSTNVAPRSMTLVSWALL 418
[Close]
BLAST of mRNA_H-paniculata_contig10075.57.1 vs. uniprot
Match: A0A7S2HI49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HI49_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.670e-6
Identity = 30/86 (34.88%), Postives = 46/86 (53.49%), Query Frame = 1 
Query:    1 FGDHDRARALFQKGLEADNGNPFVCHAWGLMEEKEGNFNRARGLLKMA---RPKVAITTALGELEASQGNLEEARRVFQEGLDRLA 249
             G+  RA+ L++K LE D  NP+VCHA+GLME++ G         + A       A+  +LGEL  S  N   A+ ++ +   RL+
Sbjct:   10 LGNRIRAKGLYEKALELDEFNPYVCHAYGLMEKRFGXXXXXXXXXEHALTHSSTAALVCSLGELHVSSSNPTLAQSLYAQHFTRLS 95
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10075.57.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7G1I2_ECTSI2.850e-5240.52PsbB mRNA maturation factor Mbb1, chloroplast n=1 ... [more]
A0A6H5L0Y9_9PHAE3.260e-2830.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2DH37_9STRA4.340e-1534.08Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1Z5JWF6_FISSO9.080e-1328.68Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A1E7ERC4_9STRA1.470e-1228.57TPR-like protein n=1 Tax=Fragilariopsis cylindrus ... [more]
A0A448Z6G4_9STRA7.580e-1024.38Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4ERE6_9STRA3.200e-940.43Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2RLM4_9STRA2.270e-844.16Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S1EU19_9RHOD1.510e-737.50Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S2HI49_9STRA2.670e-634.88Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10075contigH-paniculata_contig10075:2355..8888 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score196.4
Seed ortholog evalue2.2e-47
Seed eggNOG ortholog2880.D7G1I2
Preferred nameTTC6
KEGG rclassRC00002,RC00078
KEGG koko:K00951,ko:K12869
KEGG ReactionR00429
KEGG Pathwayko00230,ko03040,map00230,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cellular component assembly
EggNOG OGsCOG0457@1,KOG1124@2759
Ec32 ortholog descriptionPsbB mRNA maturation factor Mbb1, chloroplast precursor
Ec32 orthologEc-07_001100.1
EC2.7.6.5
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko03041
Exons7
Model size1083
Cds size1083
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928713.8011417-CDS-H-paniculata_contig10075:2354..24921622928713.8011417-CDS-H-paniculata_contig10075:2354..2492Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 2355..2492 +
1691480589.925218-CDS-H-paniculata_contig10075:2354..24921691480589.925218-CDS-H-paniculata_contig10075:2354..2492Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 2355..2492 +
1622928713.8141158-CDS-H-paniculata_contig10075:3457..37001622928713.8141158-CDS-H-paniculata_contig10075:3457..3700Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 3458..3700 +
1691480589.9350114-CDS-H-paniculata_contig10075:3457..37001691480589.9350114-CDS-H-paniculata_contig10075:3457..3700Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 3458..3700 +
1622928713.8249435-CDS-H-paniculata_contig10075:5273..53451622928713.8249435-CDS-H-paniculata_contig10075:5273..5345Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 5274..5345 +
1691480589.9455287-CDS-H-paniculata_contig10075:5273..53451691480589.9455287-CDS-H-paniculata_contig10075:5273..5345Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 5274..5345 +
1622928713.8353455-CDS-H-paniculata_contig10075:6057..61951622928713.8353455-CDS-H-paniculata_contig10075:6057..6195Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 6058..6195 +
1691480589.9575849-CDS-H-paniculata_contig10075:6057..61951691480589.9575849-CDS-H-paniculata_contig10075:6057..6195Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 6058..6195 +
1622928713.8451586-CDS-H-paniculata_contig10075:6502..65891622928713.8451586-CDS-H-paniculata_contig10075:6502..6589Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 6503..6589 +
1691480589.9682484-CDS-H-paniculata_contig10075:6502..65891691480589.9682484-CDS-H-paniculata_contig10075:6502..6589Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 6503..6589 +
1622928713.86055-CDS-H-paniculata_contig10075:7151..73161622928713.86055-CDS-H-paniculata_contig10075:7151..7316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 7152..7316 +
1691480589.9768715-CDS-H-paniculata_contig10075:7151..73161691480589.9768715-CDS-H-paniculata_contig10075:7151..7316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 7152..7316 +
1622928713.8697715-CDS-H-paniculata_contig10075:8648..88881622928713.8697715-CDS-H-paniculata_contig10075:8648..8888Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 8649..8888 +
1691480589.984312-CDS-H-paniculata_contig10075:8648..88881691480589.984312-CDS-H-paniculata_contig10075:8648..8888Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10075 8649..8888 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10075.57.1prot_H-paniculata_contig10075.57.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10075 2355..8888 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10075.57.1

>prot_H-paniculata_contig10075.57.1 ID=prot_H-paniculata_contig10075.57.1|Name=mRNA_H-paniculata_contig10075.57.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=361bp
FGDHDRARALFQKGLEADNGNPFVCHAWGLMEEKEGNFNRARGLLKMARP
KVAITTALGELEASQGNLEEARRVFQEGLDRLATIPNPGQARNGKWIGPG
RVARGWQEIAAEGPGEILITWAKLEEQSGGDPNRAQALMEQAREGDPSNV
KAHIERARFEMRRGHNEQARLILSNAADLPQKQGDLFNMWATLEAKEGNL
QTALKIAEAAIERFPDDMSLLQTQGTVLGRLGKYAAAVDCYRRSIAFRPA
APAYVAWALVVSKLAFRKEAKRKDKEASSKSHELLLLRASFRPSLAPLCR
YNIMLVKQGDGGHVSIGSGEDIKIESEYEGVKISHAEARRLFELGMKFTP
GHGPLYNAYG*
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mRNA from alignment at H-paniculata_contig10075:2355..8888+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10075.57.1 ID=mRNA_H-paniculata_contig10075.57.1|Name=mRNA_H-paniculata_contig10075.57.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6534bp|location=Sequence derived from alignment at H-paniculata_contig10075:2355..8888+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCGGCGACCATGACAGGGCAAGGGCGCTGTTTCAAAAAGGGCTCGAGGC
AGACAACGGTAATCCATTTGTGTGCCATGCCTGGGGCCTCATGGAAGAGA
AGGAAGGCAACTTCAACCGCGCCAGGGGGTTATTGAAGGTGGACATACTT
GGAAAATGAAATACGGAAGAACCAGGGCAAGATACTATGCTCATTGTCCA
ACCTGTCTCTCACGTTTAGCTCCATTTTGCGGACAGTATTGCTGCCGCTG
CTGTGTCTAATTTGCCGTACTCCCTATGCCTTGCCTGTCCATACCATTCC
TTGTAGTCACCGCCTTTGTTTGTCCAATGTGCATTGCAAGTCAGACTTTG
TAGCAAGTATTCGTATCGCTTACTCAGTCTTATGGATTATTTGATCATTC
TCCAATTTCGTTTTTTTGGGTTCTCACATTTCGTTGATGGTCACCCGTAT
GTAATACGTTAAATTTGTCGGGGTTCACATGTAAGGAGGCAGTCCCGTTT
TTTTTGTCCATGTTTTGAGGTGGGAGGGGGGCTCTACAGTTTAACCCCTA
TGTATGCCGTGGTTAATAGGGTACAGCACCCGCTTGAGACGACATGATGA
AGTTTCTACCCGGCGGGTGGTACCCTCGATCACACACGATAACCCCCCAC
CCCCCTGATTTGTGTACGCTCTCTTACAGTTTACTCAGCTAGCTTATTTA
TCACCCAGGTTCCGGGAGGTGATACACGCCCCTCAATTCGCAGGCATTTT
TCCCTCCAAAGTTTTATAGCTAGCAGTTGTTATTTTGAGTAGTGTATGAC
ATACGGAAGGGCGGTAGTATACTTCGGCATAGTATACCCTGTGAACTACG
GTATGTCATCGTCCATAGCTGATGGTGCATCCGAAGGCGCCGAGGTACGA
GCCTACGTTCCGGTGGAATATATATATATTTTTTTATTGACGTGATTTGG
TTGTGTGTGTTTCGCTCGTTCAGGCCCCTACTTGATCGGGAGGATCTCCG
CGCGGTAAAAAAATAGAGTATGTATGTATTGCCCCACTCGGTAAATGTAT
TTGCTTTGCAAATTGCCCATGGCGTGTTTTGTACTGAAACGGCCATAACA
CAGATGGCGCGTCCAAAGGTGGCGATCACGACGGCGCTGGGCGAGTTAGA
AGCTTCTCAGGGCAACCTGGAAGAGGCAAGAAGGGTCTTTCAGGAAGGAT
TGGACCGACTCGCCACGATACCCAACCCGGGTCAGGCACGGAATGGGAAG
TGGATCGGACCCGGTCGCGTCGCTCGCGGGTGGCAGGAGATAGCTGCCGA
GGGACCTGGCGAGATTCTCATCACGTGGGCGAAGTTGGAAGAGCAGGTAG
CGCTTTATTGGGTTTTTTTTTTCAAGCCTTAGTCTGTCAATTGATCTTGT
ACGCACGGTCTGAAGCTGGGAGTATATTGATGCCTCATGACTTGCCTTGT
AATTTTTATCTTGTGGAGGGCTCAATGGTTTTTCTACTCGCTCGTCAACG
GTGAAACTGGCGATGGCATATACTAGATGGGTATTTTTTTTATTTCATTA
ATTTTGCAGGTGAACAATTCTGTCGAGTAGTAACATTTTTTCCCTGAAGA
AATGATGAGAAAACGTGGCAGATACCGAGAAGTGAATCCACGACCTTCCC
GTGGGATGAAATCTTAGCCCATCGCTATGACCACAGGGTGCAGGTATAGA
GCCCGTAGTATCCGAACAATGCGAGATCATAGCTTGATGAACTCAAGCTA
TCACTTTAAATCCTAATATGAGCGGCAGGACATTTCGAAGGACACTTGCC
TTTCATGGGGGGGGGGGGGGTTCTAAAATGGCGTCGCACTGCCTCATCAA
ATCGTACCTGGTAAGGTCGGACACGAAATAGCAGTCTTTCAGAGAAGCCC
TGTTTCGGTCAATTCAGGCAACATAAAGTGTCTCCCCCTTCACGAACACA
TATCGGGACTGAGAGCACCGCTTCGGAGAGAAGAAACACATGGATCTCCT
TGTTCATCTACCGTACTAGCGAGTATTATATGGTAAGTCGTTTCCCAAAA
CGTATGCTCTTGGTGCAGGGGTAATCGAGAAATTTTGCATCTCGGTGGCA
GTAACCCCCCGTACGTCCGTTCTTAAAAACGTTTACCGATGAACAAGCAT
AGCTGTGAGTGTGGAGAAGGCAAGCTATATGATATCAGCGTAACGTGCAA
ATGTACGTCTAAATAGTACCCCAATCCCTACTTGACCCGGCAGATTAGTC
GTCTTCGCCGAGGTTCTTGTGTGGGTACCGGTGTCTCTGCTCTCTTCCTG
TTTTCAGTTTTATGTACCTAGTCTACATATGCAATGTGCCCCTGACTTCT
GTTGAAATTTGTTTCATGTGTATTTTGCCATGGGCTGAAACCTGAGGACA
CCCGGTTAGTTGTCGTGCAATAGATATGCCGCCCCAGGCGAACTCCTCAC
GGGACTGTGTCTCCCGCGTAGATCGTTCAATGACGATCTTCACGCCAGAG
TCGATCGTCCTAGCGCGGGCGATCGAACTCTACCTCACGAACTAAATGAA
ACAAGCGTTACGAGTAGCGGTATTTTTTCGCCGTCAGAGCCTCTCACCTT
ATTCTAGTGCGGAAACACATACATTGTTTTTTTCACCACGTCGCAACTAA
ACCCAGCGCAGTGTGTCTGTGTATTGGACATACCGTAGACTGTGACAATC
AATGAGATGCACTTTCCCCCCTCCTACCCCCCCCCTCCAATCCCGACTGG
CATTTGCTGGGGGCAACTAGCTTCCATCTTCGGGTGGTGCCCCATGTTGA
GGAGTGTGGCTCTAGGAAGTGGCTCCCCTGTTTGATATCGACTCTTGGTT
GCCATGTTTTTCCAAGTTTTCCTTGCCTCTTCTTGTGTCGTGACTTATCC
GTGTTTTTGCTTTCGTCAGAGCGGGGGAGATCCCAACCGAGCTCAGGCAC
TCATGGAGCAAGCGCGAGAGGGCGACCCGAGTAATGTGAAGGTGACGAGG
GGGAAAACAGATACATGATACTCTTGGAAGAGGCAGGTGGCAGGAAGGGA
TGCGAGTTGAATCAAGACAGAACAGAGATCAGTCAAAACTCAATGCTTGC
CACACATGAGGAGGGCGGAGCAACTTATGAGCCTAAAGCGATAGTGTGAC
AGTTACGCTTGGGGGGGGTACGACGGTGAAACTCGAATAATTTTATGATT
AATTTTTTTTGAGAAAACGGTTATCCTTGTCACGTGAAAACAGTCGGATG
ATTTATCGAAAAAAAATTTGGAGATGGCTATCAATTACGTCGCCTGGTGT
TATTTTGTCCACTTCATACGGTTTATTCTGTAGTCAAGTTTTGATTTGAT
TTTTGCCTTGGGGGTCAAGATGTACTAGCCGTTGCTCGTCTCTGCCGGCT
ACTGTTCTGTGCTCTCATGTCATGTCTCTCCTCGTTGGCTCCATGTATTA
CTGGTCGTAAATCCATGGCTAGGCCGTGCAGCCCGTGCTCCGCACTCAAC
CTACACACGTTCGACTCGTTGCGCTAGCAGTCGCTCGCTACGGTCGGAGA
AAGATTCCTGTTTCAGAATTCACTTGACTCCAGACTTGAAAAACTGTTCC
GAAATTGCGATTACCTGACCGTGTCAATTGATTCAGATATTCGTATGTTG
TAAATGATGCTGGTCCGGATTTTCTTTGCTTCCCATCATTTTCTTGTGTC
AAGGCTCACATCGAGCGCGCAAGGTTCGAGATGCGTCGAGGTCACAACGA
GCAGGCGCGCCTCATCCTCAGCAACGCTGCCGACCTACCTCAGAAGCAAG
GAGACCTATTCAATATGTGGGCAACTCTCGAGGCGAAAGAGGTGTGTGGA
CTTGCGCAACATGGACTTCATCGGCGAAACCTGCTGATCCGACCGGTTTA
GCACACCCTTTCTCCCATGCACCGTCTCGTCCTACCATACAGTACCGGTT
CGCTCATTAGACCCGGGCCTACTAGAAAGTAACCTTCCGCTCCGTCGTCT
CGAGGATGCATGGTCAATGATCCAGCAATTACGGTGTGCTAAATATGAGT
ACGCCCCCCCGATGATTTAATTTGTTGATGAGTGCACGCAATTGGCGTCT
GAAGTCAATGTGACTTCGCCGCTCCTTCCCCCGTACAACACTCCCCAGGG
AAACCTCCAAACAGCTCTTAAAATTGCGGAGGCAGCGATTGAGCGTTTCC
CGGACGACATGAGCCTGCTGCAAACGCAAGGAACGGTGAGTACAATAGTT
TGCGATTTTTTATGTCTAACCAGTTCGATAGGTCAATAATCGACAGAGTT
TGTTTTTTTTTTCTGATTTTTTTTTTTTCTACTTGTTGAATCTTCCCTCC
CTCCCTCCCTCCCTCCCAAAAAAGTCAAATTGACACACAGAGCGGCTCGA
ACGATCTCGAGGGAAGCTGTGAACTTCGTAAGTGGCGATATGCAGCGAGA
TCTGTGTCATCTATCCACATCCTAAAAGAAATTTGACGACATTCTATCTA
TCTCCCAGCGCACCAAGGGCTAAAGAATGCGAGAAGAAATACTCTCAGGC
CTAACACTGTCCAACGAACCGGGGTGGCGCCTACCCCGTAGAGGAACAAT
TAACTCTGTTCTTTCAAAGGAAATGTAGACGTACTTCGGTATGGAAGCAT
CGGATCGAGGTTTTTGCCTTAGCCTTCCGGGGGTTTAAAAAAAGAAAAAA
AACACTCTGTCCAACCCCCTCGTGGTGTATATATCCTCTCAAAAATGACA
TACACGTGCTTGTTCACGCGTTCTGTGATCCTTGGCATGCTGTGAAGGTA
CTGGGTCGGCTGGGCAAGTATGCCGCTGCCGTGGACTGTTACCGCCGAAG
CATTGCTTTCAGACCAGCGGCGCCGGCGTACGTGGCTTGGGCGCTTGTGG
TGTCTAAGCTGGCCTTCCGCAAAGAGGCAAAGCGCAAGGATAAAGAGGCA
AGTTCCAAATCTGTGATCATGTCTTAATATACTTATTTGGTCTCCAAAAA
CCAACGATGGTGTGTTCTGTTCTTGTTGTCTTGGAAACATATATATATAT
ATATATATATATATATATATTTCGCCCGTGGTCGGCGGGCAAGTATATAC
TGCACGTGATGATGCTTTCGCTTATGATGGGGAGAACCGGAACCGGTTCG
AAGAAGCACGGTTTGTACGAAATAAATTGTTTACATTGGAATAAGGTTGG
TTGTGTAGGATTATCATGGTCATTCGCCACAAAAATGTATATTTTGAAGT
TTCGATCTAATTGAAAATTGTAACACTTTGCTGCAGGGGACCACTTATAT
ATCTTGAAGTTAGATGAGGAGAAGCTACCATGGTTGCGTTCACGAACAAA
TCGGCTAATCTTTTTTTTTTTCTTTTCTTGCAGCTCGTTTTATTTATCGC
TCAGACCTGCTACGCTATCAGCGTTAATATATAATAATCTGGAAGCTTGA
AATAACGCTGCACAAGGTAGCTTGTAACGCTGCGCTAGGTAGATGTCAAT
TGTTGCGGCGTTTTGTTCACGTTGTATGTCATGTGTAACCACTTGGAAAT
TCTAGAGATCGTGACAAACCATGATGAGATGCGTGGATGGTTGTACCCCA
GTTCGAAGGTAATGGTGATGGTGATAGTGATGAAAGTACCTACTCTCTAT
TTTGCGGTTTGTGAAGATGTCTATCAGGAATAATATCAAATTTTACTAAG
CGTGCCTCCGTTTTTCTTCTTGTTTTTCAACCGTTGTTTGTTTTTTCCGA
ACTATTTTCTTGTCTTTGCCTTTACCCCAAAAATACATTTTCCAAAAAAA
AAAAAAAAATTGAAATCAACGCTCAACCCCCCACACCCCGATCAACACCA
AGCAGTTATTTTCATGGATTAACCACCAGTATGGAAAGCTCGACGTCGTA
CGTTCTTGGTGTTGTTGAAACCGGCTCGCTGCACCACATGCAGAGGCGTT
TCTGCCCCATTTGCAGACTGTCTTTCTTGCTGTGTCGGTCCCCTGAGGGT
CACTCCTGCCTTGCAGAGCAGAGACTTCTCCGTGTAGATAATTAACCGTG
TGTGCTCCACACTATATCCATGAAACCAGACCAACACTAGAGCGGAGCAG
CGGGGTCACATGAGCCAGTCTACCGTCAGAGTGTTCGTTCTGTTCTCACG
AGTGTAAATTGGAACCCATTTGTTTGTTTCTACTGTTCCGTTACCCACCA
ATATCAAGGCTCAGATCTCAATTTTTCTTTATTCTCTCCGCCTTATCGAG
GACATGTGGTCGACGATTTAACTAACAACTAAGCGCGTGTGAAGCATGAA
CTTCTCCTCTTGCGCGCCTCCTTTCGCCCCTCCCTCGCTCCCCTTTGTCG
CTATAATATAATGCTGGTCAAACAGGGGGATGGGGGACATGTGAGCATTG
GCAGCGGCGAGGACATAAAAATTGAAAGTGAGTACGAGGGGGTGAAGATT
TCTCACGCAGAGGCAAGGAGACTGTTTGAGCTAGGGATGAAGTTCACCCC
TGGACACGGCCCACTCTACAACGCGTACGGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig10075:2355..8888+

>mRNA_H-paniculata_contig10075.57.1 ID=mRNA_H-paniculata_contig10075.57.1|Name=mRNA_H-paniculata_contig10075.57.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2166bp|location=Sequence derived from alignment at H-paniculata_contig10075:2355..8888+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCGGCGACCATGACAGGGCAAGGGCGCTGTTTCAAAAAGGGCTCGAGGC
AGACAACGGTAATCCATTTGTGTGCCATGCCTGGGGCCTCATGGAAGAGA
AGGAAGGCAACTTCAACCGCGCCAGGGGGTTATTGAAGTTCGGCGACCAT
GACAGGGCAAGGGCGCTGTTTCAAAAAGGGCTCGAGGCAGACAACGGTAA
TCCATTTGTGTGCCATGCCTGGGGCCTCATGGAAGAGAAGGAAGGCAACT
TCAACCGCGCCAGGGGGTTATTGAAGATGGCGCGTCCAAAGGTGGCGATC
ACGACGGCGCTGGGCGAGTTAGAAGCTTCTCAGGGCAACCTGGAAGAGGC
AAGAAGGGTCTTTCAGGAAGGATTGGACCGACTCGCCACGATACCCAACC
CGGGTCAGGCACGGAATGGGAAGTGGATCGGACCCGGTCGCGTCGCTCGC
GGGTGGCAGGAGATAGCTGCCGAGGGACCTGGCGAGATTCTCATCACGTG
GGCGAAGTTGGAAGAGCAGATGGCGCGTCCAAAGGTGGCGATCACGACGG
CGCTGGGCGAGTTAGAAGCTTCTCAGGGCAACCTGGAAGAGGCAAGAAGG
GTCTTTCAGGAAGGATTGGACCGACTCGCCACGATACCCAACCCGGGTCA
GGCACGGAATGGGAAGTGGATCGGACCCGGTCGCGTCGCTCGCGGGTGGC
AGGAGATAGCTGCCGAGGGACCTGGCGAGATTCTCATCACGTGGGCGAAG
TTGGAAGAGCAGAGCGGGGGAGATCCCAACCGAGCTCAGGCACTCATGGA
GCAAGCGCGAGAGGGCGACCCGAGTAATGTGAAGAGCGGGGGAGATCCCA
ACCGAGCTCAGGCACTCATGGAGCAAGCGCGAGAGGGCGACCCGAGTAAT
GTGAAGGCTCACATCGAGCGCGCAAGGTTCGAGATGCGTCGAGGTCACAA
CGAGCAGGCGCGCCTCATCCTCAGCAACGCTGCCGACCTACCTCAGAAGC
AAGGAGACCTATTCAATATGTGGGCAACTCTCGAGGCGAAAGAGGCTCAC
ATCGAGCGCGCAAGGTTCGAGATGCGTCGAGGTCACAACGAGCAGGCGCG
CCTCATCCTCAGCAACGCTGCCGACCTACCTCAGAAGCAAGGAGACCTAT
TCAATATGTGGGCAACTCTCGAGGCGAAAGAGGGAAACCTCCAAACAGCT
CTTAAAATTGCGGAGGCAGCGATTGAGCGTTTCCCGGACGACATGAGCCT
GCTGCAAACGCAAGGAACGGGAAACCTCCAAACAGCTCTTAAAATTGCGG
AGGCAGCGATTGAGCGTTTCCCGGACGACATGAGCCTGCTGCAAACGCAA
GGAACGGTACTGGGTCGGCTGGGCAAGTATGCCGCTGCCGTGGACTGTTA
CCGCCGAAGCATTGCTTTCAGACCAGCGGCGCCGGCGTACGTGGCTTGGG
CGCTTGTGGTGTCTAAGCTGGCCTTCCGCAAAGAGGCAAAGCGCAAGGAT
AAAGAGGCAAGTTCCAAATCTGTACTGGGTCGGCTGGGCAAGTATGCCGC
TGCCGTGGACTGTTACCGCCGAAGCATTGCTTTCAGACCAGCGGCGCCGG
CGTACGTGGCTTGGGCGCTTGTGGTGTCTAAGCTGGCCTTCCGCAAAGAG
GCAAAGCGCAAGGATAAAGAGGCAAGTTCCAAATCTCATGAACTTCTCCT
CTTGCGCGCCTCCTTTCGCCCCTCCCTCGCTCCCCTTTGTCGCTATAATA
TAATGCTGGTCAAACAGGGGGATGGGGGACATGTGAGCATTGGCAGCGGC
GAGGACATAAAAATTGAAAGTGAGTACGAGGGGGTGAAGATTTCTCACGC
AGAGGCAAGGAGACTGTTTGAGCTAGGGATGAAGTTCACCCCTGGACACG
GCCCACTCTACAACGCGTACGGGTGACATGAACTTCTCCTCTTGCGCGCC
TCCTTTCGCCCCTCCCTCGCTCCCCTTTGTCGCTATAATATAATGCTGGT
CAAACAGGGGGATGGGGGACATGTGAGCATTGGCAGCGGCGAGGACATAA
AAATTGAAAGTGAGTACGAGGGGGTGAAGATTTCTCACGCAGAGGCAAGG
AGACTGTTTGAGCTAGGGATGAAGTTCACCCCTGGACACGGCCCACTCTA
CAACGCGTACGGGTGA
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