mRNA_H-paniculata_contig1004.41.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1004.41.1
Unique NamemRNA_H-paniculata_contig1004.41.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1004.41.1 vs. uniprot
Match: D7FL61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL61_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.650e-46
Identity = 170/313 (54.31%), Postives = 199/313 (63.58%), Query Frame = 1 
Query:  172 QRPQVIQTITVGSSFASSTPRSSTNLSMSC----TPARVTTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYVDGMYNTWKSQDDKATAERCRRTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDDNLMDAQSLSMRTQAVGISSAATAGLKARARARRKAKRALSNGKRLSGEIGSCSSDDDDNDIGNGDQSDLDLA-VSQKLADACILTESMSVTPASSVAVGSLMGRSLGNAMASSFADDGLVWGRGDGXXXXXRSVVEDSFFHQNVSPSASPPMGSMASSSGMQSRSGSIDIS--SRRALF 1089
            +R QV QTITVGSSF+ STPRSS+++SMS     TP+RVT KAGGLGRGSNPLDSFFPFDPYLLRRSHVY+D MYNTWK+QDD +     R T+            XXXXXXXXXXXXXXXXXXXXXXXXX  D  MDA S+S R  A G+ + +   L  R  A +K K                                 +   +S+K+AD  I TESMSVTPASSVAVGSLMGRSLG AM+SSFADDGLVWG G G         +D+FFH+NVSP  SPP+    + +G+  RS  +DI   S+RALF
Sbjct:  586 ERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVT-KAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDQMYNTWKAQDDSSR----RSTKSSGARTPAGAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXD--MDASSMSFRDGASGLRARS---LHQRNEAAKKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARRMSRKMADTYI-TESMSVTPASSVAVGSLMGRSLGQAMSSSFADDGLVWGTGAGGAA---GTPDDAFFHENVSPCPSPPL----ADAGISGRSRPLDIGVRSKRALF 880
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BLAST of mRNA_H-paniculata_contig1004.41.1 vs. uniprot
Match: A0A6H5JBP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBP9_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 8.720e-20
Identity = 63/104 (60.58%), Postives = 74/104 (71.15%), Query Frame = 1 
Query:  778 VSQKLADACILTESMSVTPASSVAVGSLMGRSLGNAMASSFADDGLVWGRGDGXXXXXRSVVEDSFFHQNVSPSASPPMGSMASSSGMQSRSGSIDISSRRALF 1089
            +S+K+AD  I TESMSVTPASSVAVGSLMGRSLG AM+SSFADDGLVWG G G         +D+FFH+NVSP  SPP+   A S   +SR   I + S+R LF
Sbjct:  201 MSRKMADTYI-TESMSVTPASSVAVGSLMGRSLGQAMSSSFADDGLVWGTGAGGAA---GTPDDAFFHENVSPCPSPPLAEAAISG--RSRPLDIGVPSKRTLF 298
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BLAST of mRNA_H-paniculata_contig1004.41.1 vs. uniprot
Match: A0A7S1CWQ3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CWQ3_CYCTE)

HSP 1 Score: 78.6 bits (192), Expect = 1.920e-12
Identity = 39/72 (54.17%), Postives = 49/72 (68.06%), Query Frame = 1 
Query:  208 SSFASSTPRSSTNLSMSCTPA-----RVTTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYVDGMYNTWKSQDD 408
            S+FA+    + +  S+  TPA     R+    GG+G+GSNPLDSFFPFDPYLLRRSH Y+DGMY  W+S  D
Sbjct:  100 STFATPIKANRSRGSIISTPATLEKRRINGGVGGMGQGSNPLDSFFPFDPYLLRRSHRYIDGMYRNWESVGD 171
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BLAST of mRNA_H-paniculata_contig1004.41.1 vs. uniprot
Match: A0A835YJJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJJ1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.200e-11
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1 
Query:  268 ARVTTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYVDGMYNTW 393
            A+  T+AGGLG G NPLD++FPFDPYLLRRSH YV GMYN W
Sbjct:   48 AQPVTRAGGLGAGGNPLDAYFPFDPYLLRRSHAYVAGMYNYW 89
[Close]
BLAST of mRNA_H-paniculata_contig1004.41.1 vs. uniprot
Match: A0A7R9WNE6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WNE6_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.670e-10
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 1 
Query:  271 RVTTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYVDGMYNTWKSQDD 408
            R T   GGLG+GSNPL+SFFPFDP LLRRSH YV+ +YN W+   D
Sbjct:    2 RQTGAVGGLGQGSNPLNSFFPFDPLLLRRSHGYVEPVYNYWQGPLD 47
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BLAST of mRNA_H-paniculata_contig1004.41.1 vs. uniprot
Match: B7GDC9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GDC9_PHATC)

HSP 1 Score: 71.6 bits (174), Expect = 4.320e-9
Identity = 29/41 (70.73%), Postives = 35/41 (85.37%), Query Frame = 1 
Query:  271 RVTTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYVDGMYNTW 393
            R++   GGLG+G+NPLDSFFPFDPYLLR+SHV+VD  YN W
Sbjct:  595 RLSGGVGGLGKGTNPLDSFFPFDPYLLRKSHVFVDPFYNHW 635
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BLAST of mRNA_H-paniculata_contig1004.41.1 vs. uniprot
Match: A0A7S1ZLF3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLF3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.110e-8
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 1 
Query:  289 GGLGRGSNPLDSFFPFDPYLLRRSHVYVDGMYNTWKSQDDK 411
            GGLGRGSNPLDSFFPFDPYLLRRSH +V+  Y  W+   D+
Sbjct:  767 GGLGRGSNPLDSFFPFDPYLLRRSHPFVEPFYKHWEGSADE 807
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BLAST of mRNA_H-paniculata_contig1004.41.1 vs. uniprot
Match: A0A7S3QGM3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QGM3_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.420e-8
Identity = 29/42 (69.05%), Postives = 34/42 (80.95%), Query Frame = 1 
Query:  271 RVTTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYVDGMYNTWK 396
            R++   GGLGRGSNPLDSFFPFDPYLLRRS+ +VD  Y  W+
Sbjct:  429 RISGGVGGLGRGSNPLDSFFPFDPYLLRRSYTFVDPYYRHWE 470
[Close]
BLAST of mRNA_H-paniculata_contig1004.41.1 vs. uniprot
Match: A0A7S2R3F1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3F1_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 6.310e-8
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 1 
Query:  190 QTITVGSSFASSTPRSSTNLSMSCTPARVTTKAG--GLGRGSNPLDSFFPFDPYLLRRSHVYVDGMYNTWK 396
            Q +  G S +    R ++++  + T A+   K G  GLG+GSNPLDSFFPFDPYLLR S+++V+  Y  W+
Sbjct:   64 QRLASGISISKQKKRKASSIRTAATLAKARMKGGVGGLGQGSNPLDSFFPFDPYLLRLSYMFVEPHYKNWE 134
[Close]
BLAST of mRNA_H-paniculata_contig1004.41.1 vs. uniprot
Match: A0A7S2YI08_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YI08_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.690e-7
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 1 
Query:  271 RVTTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYVDGMYNTWK 396
            R T   GGLG+G NPL +FFPFDPYLLR S+ +++  YN WK
Sbjct:   71 RKTGGVGGLGKGDNPLGTFFPFDPYLLRHSYAFIEPFYNHWK 112
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1004.41.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FL61_ECTSI1.650e-4654.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBP9_9PHAE8.720e-2060.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1CWQ3_CYCTE1.920e-1254.17Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A835YJJ1_9STRA1.200e-1173.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9WNE6_9STRA4.670e-1065.22Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
B7GDC9_PHATC4.320e-970.73Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1ZLF3_9STRA1.110e-870.73Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3QGM3_9STRA1.420e-869.05Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2R3F1_9STRA6.310e-845.07Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2YI08_9STRA2.690e-759.52Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1004contigH-paniculata_contig1004:23310..27232 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score166.4
Seed ortholog evalue1.9e-38
Seed eggNOG ortholog2880.D7FL61
Preferred nameRRN3
KEGG koko:K15216
Hectar predicted targeting categoryother localisation
GOsGO:0000120,GO:0000182,GO:0000976,GO:0001013,GO:0001042,GO:0001046,GO:0001047,GO:0001067,GO:0001163,GO:0001164,GO:0001167,GO:0001169,GO:0001179,GO:0001181,GO:0001188,GO:0001701,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005730,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006356,GO:0006360,GO:0006361,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007000,GO:0007028,GO:0007275,GO:0007399,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009303,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019827,GO:0019899,GO:0022008,GO:0022607,GO:0022613,GO:0023051,GO:0023057,GO:0030154,GO:0030718,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036099,GO:0042254,GO:0042592,GO:0042790,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0044798,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060548,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070063,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0098727,GO:0098781,GO:0120035,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901796,GO:1901797,GO:1902253,GO:1902254,GO:1902531,GO:1902532,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000026,GO:2000112,GO:2000142,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
EggNOG free text desc.rna polymerase i-specific transcription initiation factor
EggNOG OGsKOG2434@1,KOG2434@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021
Exons2
Model size2431
Cds size840
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928711.53621-UTR-H-paniculata_contig1004:23309..235611622928711.53621-UTR-H-paniculata_contig1004:23309..23561Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1004 23310..23561 +
1691480588.4158745-UTR-H-paniculata_contig1004:23309..235611691480588.4158745-UTR-H-paniculata_contig1004:23309..23561Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1004 23310..23561 +
1622928711.5731628-UTR-H-paniculata_contig1004:25893..272321622928711.5731628-UTR-H-paniculata_contig1004:25893..27232Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1004 25894..27232 +
1691480588.4432826-UTR-H-paniculata_contig1004:25893..272321691480588.4432826-UTR-H-paniculata_contig1004:25893..27232Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1004 25894..27232 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928711.5481522-CDS-H-paniculata_contig1004:23561..237051622928711.5481522-CDS-H-paniculata_contig1004:23561..23705Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1004 23562..23705 +
1691480588.4270027-CDS-H-paniculata_contig1004:23561..237051691480588.4270027-CDS-H-paniculata_contig1004:23561..23705Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1004 23562..23705 +
1622928711.5612712-CDS-H-paniculata_contig1004:25197..258931622928711.5612712-CDS-H-paniculata_contig1004:25197..25893Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1004 25198..25893 +
1691480588.4364202-CDS-H-paniculata_contig1004:25197..258931691480588.4364202-CDS-H-paniculata_contig1004:25197..25893Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1004 25198..25893 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1004.41.1prot_H-paniculata_contig1004.41.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1004 23562..25893 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1004.41.1

>prot_H-paniculata_contig1004.41.1 ID=prot_H-paniculata_contig1004.41.1|Name=mRNA_H-paniculata_contig1004.41.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=280bp
MSCTPARVTTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYVDGMYNTWKSQ
DDKATAERCRRTRRPRTSSTTVLSESDSVSSQDEDDGDDSSSVSSGDAGD
IDDNLMDAQSLSMRTQAVGISSAATAGLKARARARRKAKRALSNGKRLSG
EIGSCSSDDDDNDIGNGDQSDLDLAVSQKLADACILTESMSVTPASSVAV
GSLMGRSLGNAMASSFADDGLVWGRGDGGGGGGRSVVEDSFFHQNVSPSA
SPPMGSMASSSGMQSRSGSIDISSRRALF*
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mRNA from alignment at H-paniculata_contig1004:23310..27232+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1004.41.1 ID=mRNA_H-paniculata_contig1004.41.1|Name=mRNA_H-paniculata_contig1004.41.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3923bp|location=Sequence derived from alignment at H-paniculata_contig1004:23310..27232+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTAGTGTGACTTCGCTGTGTTCTCTGTCTGTAGCATGAATAAAAATGCA
AGCACTTGGCACAGAGTATTCCTTTCTCCTGCCCGTGAACCTCTTTTTGA
CCTCTACCTCGTTTTGTGCTCGATTCTGTTGGTACCGCTACTCACTGTGA
TCTACTGTCTTACACGTGTCACAGCGGCCTCAGGTGATACAAACCATCAC
AGTTGGCTCGAGCTTCGCGTCGTCTACTCCGCGATCATCCACTAATTTGT
CCATGTCATGTACGCCTGCAAGGGTTACCACGAAAGCTGGCGGCCTAGGA
CGGGGGTCTAACCCGCTCGATTCTTTTTTTCCCTTCGATCCCTACCTCTT
GCGGAGGTCGCATGTTTACGTGGACGGCATGTACAACACTTGGAAGGTAC
GGAAAGAGTTTTAGGAAATATGGTAGTCGGGAGGGAGTACGACGTATATA
GTATGTAGGTGTGCGATCGTCAAAGGCCGCAATTTGATTGCTCCGGTCAA
ATTGTTCAACTTGTCACATGATTTCAAACCAAACCCCGTTAGAGGTCCAC
ACAACAGTGATGGTACTATGTATTGAAAAAAAAAAATGATTATGACCCAG
TAATCGTGATGAGGTAGCTCCCGAAATCTAACCCTATGCATGTTATAGCT
TTGGTGACGGCATGTGTGTGTGTGTGTGTGTGTGTTTGTCATGAGCTCCT
CCTGGCAAGTAGAATTAAAGGATTTACAAAAGCAGATAAATACCAGTCGC
TTCATGTTTGAAAGAGGCAGAAGTGACAAACGTCGTTGCCTAATGTATCA
TGATCGGTTGTACGTTCGTCTAGTTAAAGCTCAACTAAAATTTGCTCCTG
CCTGTACAATAGGTGACTCGTTATTCGTTTGGTCTCGATTGCCACGGGGA
GTCTTTTATGTCGATATTTCCATGGTTGAATAATACATGAAGCGATGTTG
AGAATGGAAATTTGCGTTCACCAAGTGACTACGATAGATTCGCGTCGAAG
CCACGACGAGTGACCCAAGTGTATATTCGTATTCTCGTACACTAGTTACA
AATAACTATGACTCATGTGGTAGGTAGTAGTAGTAGTAGTAGTAGTGGTA
GTAGTAGTCTATATATATGGCATGGCTACGCCGGTAAAACAGCTGAATTC
AGAGTATTCATTCGTTCCCAGAAAAAAGAATCACTCTTACGAATAAAGTG
GGGTTGATGTATGCTGAATTGTTCCGAGAACTACCCACCGCCAGATGGCA
CAGCATGATAGTGTCATCTTCCAGACGATCCCGTATTTTTCTCGTTTCTC
GCAGAATTCGTTTGCCCATTCATACTGTAGGGTTTTCGCTGGTCTGCCCA
CAGTAGCCCGTGTAAACATGCTCAGTAACTTTGATTTTGTGAAGTCAACT
GTTGGAATAAGACTAGGAGACACGTCGTCCGTGGAGAGTCCCTCTATGTG
TGCTCTGTGGTTCCCCAATCAAGCCCAAGGTGTGTGTTTTCGTTTCGAAC
CGAATTTCATCCGACGGTATGTCCGGTTTCGCCAGCTGTGGATGCCTATG
TGTTGCGTTAGTTCTGGGTAGGACGCACACATGAGCATGAAAGTCTATGC
TCCGAGTTATATGTACTCTATACCTTATCACGTCACGTCTTCCTTCCATA
TCTTGCATGTCCCTTGTGAACGGCATTTTCTCTCAAAGCGTCAACAAACT
TTAGCACCAGAAGGGCAAGCCAACCTCAGGTTTACAAAAGGCAAAAAGTA
GCCCTACGAAAAATCGACGAACCACCTCTTGAAATATTCAGCACGTCGAA
ACTGTAGTGCTGCTTTGCTCTGCCACTGCCTTCCTACATTACCGCGTTCA
CTTGATTTTCCAACGCTTCCTGTTTGCACAAATTTCAGAGCCAGGACGAC
AAGGCAACGGCAGAGCGCTGTCGCCGCACGCGCAGGCCACGCACATCCAG
CACCACGGTGCTGTCGGAATCAGACAGCGTATCCTCTCAAGATGAAGACG
ACGGTGACGACTCGTCGAGCGTTTCTTCTGGGGATGCGGGAGACATCGAC
GATAACCTCATGGACGCGCAATCCTTGAGCATGCGAACTCAAGCCGTTGG
AATCAGCAGCGCCGCCACGGCTGGTCTCAAGGCTCGGGCGCGCGCTCGCC
GTAAAGCGAAGCGCGCGTTGTCGAACGGAAAGCGGTTGTCTGGCGAAATC
GGCAGCTGCAGCAGCGATGACGATGATAACGATATCGGTAACGGTGATCA
ATCGGACTTGGACCTTGCGGTCTCTCAGAAATTAGCGGACGCTTGCATTC
TGACCGAGAGCATGTCGGTTACACCTGCGAGCTCCGTGGCTGTTGGGAGC
TTGATGGGGCGGAGCTTGGGCAACGCGATGGCATCCAGTTTCGCAGACGA
TGGGCTTGTATGGGGCAGGGGTGACGGTGGAGGCGGCGGGGGCAGAAGTG
TAGTGGAGGATTCATTTTTTCACCAGAACGTTTCGCCCTCGGCCTCGCCT
CCTATGGGGTCTATGGCTTCATCGTCTGGCATGCAGAGTCGCTCGGGATC
TATCGATATCTCGTCACGGCGTGCTCTTTTTTGAAGTATGAGTATGTTGG
GTATGAAGGACGGGGATGAGGTGCATTGGGGATAATCAGCCCGCCGGGGA
ATACGTATAACGAATACGTGGAGCATGGGCGATGGAAATTTGGAAATATT
CGCCTGAGTTTCAGAATGTGTTGGCACACATATAAAGAGAGTCTTGAAAG
TGTTGACCCCTGTTTAATCGTTTCACTAGTCTTTGTTCAGAGCAGTCGTG
TATGATTGGTATGGGGCACATAGAAGAACGTGGTTATCCTGAATAAACCT
TAAGGCGAGTGCTCCAAGTTTGAGGGATAAATATGTTTGATGCTGGAAAC
GAAAATAACGCTTGTCACTTGACACCAGTTGACCATGGTGTCTGAGTATC
GTTGCCTCTGTAGTAGAGTGAAGGTTTTATTTGGTTTTTGTCCGTTTTTT
TTGTTTCATATATTGGCTTTCCCGTGCTGTTAATGGGTGTTCCTAATCGT
TAGCACAGATTTTTGGGGAGGGAGCGAGACGGTTGTTGTCGTTTGTCAGC
GATGCCAGCATTTGAAAGCTCGATTGGGATTTGGCGATTTTGGTTGGTCC
TCGTCTGTGCCCTTTGTGTGGTGTTGCCATTTATACAGAACACTTTTTGT
TTGGATTTATAGGTCATTGACTAAGGGCACATTGGTGTTTGCTAGTCTTG
GAGTGGAGTCGATGAACACGTGTGGACATATTTTGTTTTACGTCGCGTTG
AATTAAATTACTAAGAGGGCCTTTTTTTGTTTTTTTATCGGCAACTTTGG
GCAGCACTTGAATCTGGCGAAGTCGGGCCGCCCTCGACAGTACCCCCTCG
TATGGTGTGCTTTTGAACTTGATATATATATTTTTTTAACCCCCGGAAGG
CTGAGGCAAAAACCTTTTCCGCTGCTTCCACATCCAGGCATTTGTTTTGA
ACAGGAGAGGATAGGTTATATCGGTCGTTGGCTAATCGCAAAACGGTGTT
TGGTCGTCTTGGGGGTGGAGTCGGTGGACATAGGTGGACAAAATATATTC
ACTTCGCGTGAGAGTCTAAACAGTACAGTAAAGTAGATGACGTTGTTTAA
CCTGTAGAACTAGTGGAATGCTGGCGAAGAGCTGCTACTGCTGCTGCTGC
TGCCATTGTGCGGAACATTGATGCAATTTTTGTTTATCGTATCTTGATGT
AGCGCGAGGAGGGAAAATATACATGAAGCAAAACGAAGCAAGATGTAAAC
ATATCGCACTTGTTCTTGTCTAGGGCCGCATTTTATTCATCCCCGTCGGA
AAATTGACTTTCGAATGTTTGCCGAGTTTTGTGTGTCAGGAGATGAGGTT
TTTAATAATAACACATCGCACAT
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Coding sequence (CDS) from alignment at H-paniculata_contig1004:23310..27232+

>mRNA_H-paniculata_contig1004.41.1 ID=mRNA_H-paniculata_contig1004.41.1|Name=mRNA_H-paniculata_contig1004.41.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1680bp|location=Sequence derived from alignment at H-paniculata_contig1004:23310..27232+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCATGTACGCCTGCAAGGGTTACCACGAAAGCTGGCGGCCTAGGACG
GGGGTCTAACCCGCTCGATTCTTTTTTTCCCTTCGATCCCTACCTCTTGC
GGAGGTCGCATGTTTACGTGGACGGCATGTACAACACTTGGAAGATGTCA
TGTACGCCTGCAAGGGTTACCACGAAAGCTGGCGGCCTAGGACGGGGGTC
TAACCCGCTCGATTCTTTTTTTCCCTTCGATCCCTACCTCTTGCGGAGGT
CGCATGTTTACGTGGACGGCATGTACAACACTTGGAAGAGCCAGGACGAC
AAGGCAACGGCAGAGCGCTGTCGCCGCACGCGCAGGCCACGCACATCCAG
CACCACGGTGCTGTCGGAATCAGACAGCGTATCCTCTCAAGATGAAGACG
ACGGTGACGACTCGTCGAGCGTTTCTTCTGGGGATGCGGGAGACATCGAC
GATAACCTCATGGACGCGCAATCCTTGAGCATGCGAACTCAAGCCGTTGG
AATCAGCAGCGCCGCCACGGCTGGTCTCAAGGCTCGGGCGCGCGCTCGCC
GTAAAGCGAAGCGCGCGTTGTCGAACGGAAAGCGGTTGTCTGGCGAAATC
GGCAGCTGCAGCAGCGATGACGATGATAACGATATCGGTAACGGTGATCA
ATCGGACTTGGACCTTGCGGTCTCTCAGAAATTAGCGGACGCTTGCATTC
TGACCGAGAGCATGTCGGTTACACCTGCGAGCTCCGTGGCTGTTGGGAGC
TTGATGGGGCGGAGCTTGGGCAACGCGATGGCATCCAGTTTCGCAGACGA
TGGGCTTGTATGGGGCAGGGGTGACGGTGGAGGCGGCGGGGGCAGAAGTG
TAGTGGAGGATTCATTTTTTCACCAGAACGTTTCGCCCTCGGCCTCGCCT
CCTATGGGGTCTATGGCTTCATCGTCTGGCATGCAGAGTCGCTCGGGATC
TATCGATATCTCGTCACGGCGTGCTCTTTTTTGAAGCCAGGACGACAAGG
CAACGGCAGAGCGCTGTCGCCGCACGCGCAGGCCACGCACATCCAGCACC
ACGGTGCTGTCGGAATCAGACAGCGTATCCTCTCAAGATGAAGACGACGG
TGACGACTCGTCGAGCGTTTCTTCTGGGGATGCGGGAGACATCGACGATA
ACCTCATGGACGCGCAATCCTTGAGCATGCGAACTCAAGCCGTTGGAATC
AGCAGCGCCGCCACGGCTGGTCTCAAGGCTCGGGCGCGCGCTCGCCGTAA
AGCGAAGCGCGCGTTGTCGAACGGAAAGCGGTTGTCTGGCGAAATCGGCA
GCTGCAGCAGCGATGACGATGATAACGATATCGGTAACGGTGATCAATCG
GACTTGGACCTTGCGGTCTCTCAGAAATTAGCGGACGCTTGCATTCTGAC
CGAGAGCATGTCGGTTACACCTGCGAGCTCCGTGGCTGTTGGGAGCTTGA
TGGGGCGGAGCTTGGGCAACGCGATGGCATCCAGTTTCGCAGACGATGGG
CTTGTATGGGGCAGGGGTGACGGTGGAGGCGGCGGGGGCAGAAGTGTAGT
GGAGGATTCATTTTTTCACCAGAACGTTTCGCCCTCGGCCTCGCCTCCTA
TGGGGTCTATGGCTTCATCGTCTGGCATGCAGAGTCGCTCGGGATCTATC
GATATCTCGTCACGGCGTGCTCTTTTTTGA
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