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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2135 |
| Cds size | 1269 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1004.39.1 >prot_H-paniculata_contig1004.39.1 ID=prot_H-paniculata_contig1004.39.1|Name=mRNA_H-paniculata_contig1004.39.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=423bp
MTYLRNDELLYDINEASDAESPVPHDGGAGATVNRKDSPTFVVPASPREA
LREFPRRVDALVHSIVAHAIGCQPTPSPRGQGATPAEAIPCQEYDEGTKE
LGAVDNAKDRLWCEIEFDYRGIGTTNAIPIAGCVVCTSSFSGREPAGGYM
KKWATFGIRRAALLALAKRVGLAIGNRNTGLTVVRYDLGDDEYYWFNIPF
RGDGSSFVRGDNGAGISSDEARLNIAGASELEMGKMLCTLLIDVGCSVVV
PSGTQVENVAQSKMWALHLGMLKCIMTFSDDKKSNIGSPAISPMAEGDAG
AGGFCSGAAATPPIGRQDEVGFEETKVSPSHRNVRASTFRLRRTVSPTRD
RRVATTAGSGPLRSDFSADETEVPRRHNRTSSAVSIAPPSSVGGGGGFFD
EIPSLRSIRFWWCCGKANSVAT* back to topmRNA from alignment at H-paniculata_contig1004:2898..6493+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1004.39.1 ID=mRNA_H-paniculata_contig1004.39.1|Name=mRNA_H-paniculata_contig1004.39.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3596bp|location=Sequence derived from alignment at H-paniculata_contig1004:2898..6493+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGAGTGGGGGTACACGAAATATGACATACTTGCGGAACGACGAGCTT
TTGTACGATATAAACGAAGCGTCGGATGCGGAGAGCCCTGTACCGCACGA
TGGAGGAGCCGGGGCGACCGTCAATAGAAAAGATTCGCCAACATTCGTCG
TGCCGGCCAGTCCTCGGGAGGCTTTGCGCGAGTTCCCTCGCCGGGTGGAT
GCATTGGTGCACAGCATTGTCGCTCACGCCATCGGTGAGCATTTTCAGCT
AATGGAGAAGCGAGTTGATAAGAAAATTTACGTAAACAGCGTTCGTACTC
GACTTGTTTTTTTCAGCTGCCTTTCGAACCAACATCTGAGATTTTCATTG
ATCCTGTCTGGTGCTGATCTCTACACTTTGATGACGAGACGAGCGTGAAC
GTTGAATATTTTTTCAACATGGAGATTGATGGAAACAATCATGTCCAGGT
GGATATTCGAGTGCGTCATCCCTTCGAAACCGCGGGAAAAATTCCATATA
TTCTTATCACTAAATTTGGCAACCAACGGACCGCAGAGCTGCGAAATACC
ATAAAATACATGCCCCTTGCTCTCAACCCTTGACCTCTCCAAGAACACTG
TACGACTGCAAGAAGACTGTACACGATCAAAAACCTTATAGTGCAACCGA
GCGCAGTAGCATGTCCCTTAGGCATCGGTCTTGGCTGCCCTCAAAACCAC
ACCATGTATATTGCGGTCGTATGTCACCTTACGTGGTCTAGTGGATGTTG
GGGTATGATACATGTACAGGGGGGGGGGGTAAGTCGTATGTATGCTGGGA
GCTTTGCCGGACAGTTCTCCAGTTTTTCAACACTCGTATTAGTAATGTAC
TGAAACTTGACATGAAGCTCATCGACCCTGGCGCGTGGGTACCTTCCTGT
CTGTCTCAGGTTGTCAGCCAACTCCATCGCCGAGAGGACAAGGTGCCACG
CCCGCCGAGGCGATACCTTGCCAAGAATACGATGAAGGAACCAAGGAGCT
TGGCGCTGTGGACAACGCGAAGGATCGTCTCTGGTGCGAGATTGAATTTG
ACTACCGAGGAATCGGGACGACGAATGCCATCCCGATAGCCGGCTGCGTG
GTTTGCACGAGCTCTTTTTCCGGGCGCGAGCCGGCCGGCGGGTACATGAA
AAAATGGGCTACGTTCGGAATAAGGAGAGCCGCGCTTCTGGCGTTGGCGA
AAAGGGTGGGCCTAGCAATCGGGAATCGAAACACAGGGCTCACCGTAGTC
AGGTCAGTGCTTGTACCCCGAAATCTAAATAAAGCGGTGGAACGGCGTGC
TACGCTCCTTTTTTCAAGGTGTTGTCACATATATGTGCACAAAGCGTTCA
TTTTCCAATAAACATGGCTTGGTGAACGAACAATGTAAAAGAGCACGCCC
AGTTGTGTCACACTTTGCCTCAAGCTTCCGGTCCAAGGATGCTCGTTTTT
GCCTTCATATTACAGCTTACGCTTTCATGTATCTGGTTTGTATTACGATA
TTCCAGTCAACACCCTGCGGACTGTCTCCTGACCCAATATTACGCTGTCA
CACGGCAGCAACCCCGCGAATTGCGGTCATGACTCGGAGTAGAAGGCGAT
CTAAGTTTCCCTCTCTAATTTTTTGGCCAATGCTCGAATATGTACCATTG
TAAAATATGAGTACAATTCTCTTGGTAAGATAGTTTTGTTTGTGTATGCA
CACAACTGATGTTTGAGGTCAGTCGCACAACCTCAATATCCCTCTTGAAA
AATTTCGTGTTTTTTTTTTTTTGTTAATCCTTCTCTTGTGCATGAAACTG
TTATAATGTGATAACTGTAGAATAGGTCAAGAATCTCATCATACGATACC
GAGCGTGCCAAACTCGAGCTGCGATTGTACCGATTTTTTTATTTTAAGAT
GACGTTTTGAGCCCCTATTGCGTGCCGGACAGTGTGCCCCTGCCGTTCCT
CTGTGAAACGGCTGCTGTATCCGAAAACCTCTTGATTTTGAATCTGCGAA
ACCCTTGTTAATCATGGACGGTGAACCCACATGCCCAGATACGACCTGGG
GGATGATGAGTACTACTGGTTCAACATCCCGTTCCGCGGAGACGGGTCCT
CGTTCGTGCGAGGCGACAACGGGGCCGGAATTTCCAGCGATGAAGCGCGG
CTCAACATCGCGGGCGCAAGTGAACTCGAGATGGGCAAGATGCTGTGCAC
GCTTTTGATCGATGTTGGCTGCAGCGTGGTGGTTCCTAGCGGAACCCAGG
TCGAGAACGTCGCCCAGAGTAAGATGTGGGCGTTGCACCTTGGCATGCTC
AAGTGCATAATGACGTTTTCGGATGATAAGAAAAGTAATATTGGGAGCCC
GGCAATATCGCCGATGGCAGAAGGAGATGCTGGAGCGGGAGGTTTCTGCT
CTGGGGCAGCGGCAACGCCGCCGATTGGTCGCCAGGATGAGGTAGGGTTC
GAGGAGACCAAGGTATCGCCGTCGCACAGGAATGTTCGTGCATCCACTTT
TCGTTTGCGTCGAACGGTGTCGCCAACAAGAGATCGACGCGTCGCGACTA
CTGCTGGTTCGGGTCCTCTCCGAAGTGACTTCAGTGCCGACGAGACGGAA
GTGCCGCGCAGACATAATCGTACCTCGAGTGCTGTTTCTATTGCTCCTCC
ATCGTCCGTTGGTGGCGGCGGCGGGTTTTTCGACGAGATTCCTAGCTTGA
GGAGCATTCGATTTTGGTGGTGTTGTGGGAAGGCCAATTCCGTTGCAACG
TAAAACAGATGAAGCGAGGGGTTCATACTTTTTGTTTAGTTCGTACGATA
GAGGAGCGAGTCGTTGGTTTGGAGGATTAGATGTAAAAGACCGGATGTGT
TAATACGTGGTGACACCGTGCGTGGGGAGGAGAGGTGCATGACTGGGTAC
GTAGCAATGCTTTCACTAGGCCATATTTGGAGGTAACCCTGTCTTCCCGA
TGATGCTTCAAAGCAGGTTTTTCGATAATCATGAGACATCCACGTCGTAT
CGTTGTCCAGGAACAGTAGCAGTGGAAGTTGCGAGTACCATGGTCCGGGA
TAACGACGTTATACTATTCAAGCTAGAGGGCTTCGAGAGTGGCAGTCGAC
AAGGTTTTCGTGTCGTCGCACACCACAATATGCCAGTTTTAGGATATTTT
TGTGTTCCAGTAAATGTATCCTTGTAGGTAGCTCGCTGAGGACTTGCGCA
TTGTGCATTTGAAATCTATGCCTATTGTAGGGAAGCTGGAAGGACTATTT
GTAGAGGTACGTGGGTATTTTGGCTAATTATGTGACGCTCAAGCATGAAT
TTCAATAGTCGGAAAATAGCGTCGTCACAACGCGACGTACAGTCGAATTT
TATGTTGTTGGTACTATGTCATTATTCGAGAGGGTCGTGAGCTGCCTGTC
CTAGGGTGGACTGTATGAGTTCTTTAGACGAAGAGTACATTTGAGTGGAG
GCGTTGAGGAATGTGGAACTAGACGGAGTTAGCTGACTGGTGAAAAATGG
CACCTGGACCAAAATGAAGGGAGGACACCAGGTTTGCCCCCCCTTTCTAT
CGTGCTGAGGGAAAAAGTAACCACGATATCATATTATGACACGACA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1004:2898..6493+ >mRNA_H-paniculata_contig1004.39.1 ID=mRNA_H-paniculata_contig1004.39.1|Name=mRNA_H-paniculata_contig1004.39.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2538bp|location=Sequence derived from alignment at H-paniculata_contig1004:2898..6493+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACATACTTGCGGAACGACGAGCTTTTGTACGATATAAACGAAGCGTC
GGATGCGGAGAGCCCTGTACCGCACGATGGAGGAGCCGGGGCGACCGTCA
ATAGAAAAGATTCGCCAACATTCGTCGTGCCGGCCAGTCCTCGGGAGGCT
TTGCGCGAGTTCCCTCGCCGGGTGGATGCATTGGTGCACAGCATTGTCGC
TCACGCCATCGATGACATACTTGCGGAACGACGAGCTTTTGTACGATATA
AACGAAGCGTCGGATGCGGAGAGCCCTGTACCGCACGATGGAGGAGCCGG
GGCGACCGTCAATAGAAAAGATTCGCCAACATTCGTCGTGCCGGCCAGTC
CTCGGGAGGCTTTGCGCGAGTTCCCTCGCCGGGTGGATGCATTGGTGCAC
AGCATTGTCGCTCACGCCATCGGTTGTCAGCCAACTCCATCGCCGAGAGG
ACAAGGTGCCACGCCCGCCGAGGCGATACCTTGCCAAGAATACGATGAAG
GAACCAAGGAGCTTGGCGCTGTGGACAACGCGAAGGATCGTCTCTGGTGC
GAGATTGAATTTGACTACCGAGGAATCGGGACGACGAATGCCATCCCGAT
AGCCGGCTGCGTGGTTTGCACGAGCTCTTTTTCCGGGCGCGAGCCGGCCG
GCGGGTACATGAAAAAATGGGCTACGTTCGGAATAAGGAGAGCCGCGCTT
CTGGCGTTGGCGAAAAGGGTGGGCCTAGCAATCGGGAATCGAAACACAGG
GCTCACCGTAGTCAGGTTGTCAGCCAACTCCATCGCCGAGAGGACAAGGT
GCCACGCCCGCCGAGGCGATACCTTGCCAAGAATACGATGAAGGAACCAA
GGAGCTTGGCGCTGTGGACAACGCGAAGGATCGTCTCTGGTGCGAGATTG
AATTTGACTACCGAGGAATCGGGACGACGAATGCCATCCCGATAGCCGGC
TGCGTGGTTTGCACGAGCTCTTTTTCCGGGCGCGAGCCGGCCGGCGGGTA
CATGAAAAAATGGGCTACGTTCGGAATAAGGAGAGCCGCGCTTCTGGCGT
TGGCGAAAAGGGTGGGCCTAGCAATCGGGAATCGAAACACAGGGCTCACC
GTAGTCAGATACGACCTGGGGGATGATGAGTACTACTGGTTCAACATCCC
GTTCCGCGGAGACGGGTCCTCGTTCGTGCGAGGCGACAACGGGGCCGGAA
TTTCCAGCGATGAAGCGCGGCTCAACATCGCGGGCGCAAGTGAACTCGAG
ATGGGCAAGATGCTGTGCACGCTTTTGATCGATGTTGGCTGCAGCGTGGT
GGTTCCTAGCGGAACCCAGGTCGAGAACGTCGCCCAGAGTAAGATGTGGG
CGTTGCACCTTGGCATGCTCAAGTGCATAATGACGTTTTCGGATGATAAG
AAAAGTAATATTGGGAGCCCGGCAATATCGCCGATGGCAGAAGGAGATGC
TGGAGCGGGAGGTTTCTGCTCTGGGGCAGCGGCAACGCCGCCGATTGGTC
GCCAGGATGAGGTAGGGTTCGAGGAGACCAAGGTATCGCCGTCGCACAGG
AATGTTCGTGCATCCACTTTTCGTTTGCGTCGAACGGTGTCGCCAACAAG
AGATCGACGCGTCGCGACTACTGCTGGTTCGGGTCCTCTCCGAAGTGACT
TCAGTGCCGACGAGACGGAAGTGCCGCGCAGACATAATCGTACCTCGAGT
GCTGTTTCTATTGCTCCTCCATCGTCCGTTGGTGGCGGCGGCGGGTTTTT
CGACGAGATTCCTAGCTTGAGGAGCATTCGATTTTGGTGGTGTTGTGGGA
AGGCCAATTCCGTTGCAACGTAAATACGACCTGGGGGATGATGAGTACTA
CTGGTTCAACATCCCGTTCCGCGGAGACGGGTCCTCGTTCGTGCGAGGCG
ACAACGGGGCCGGAATTTCCAGCGATGAAGCGCGGCTCAACATCGCGGGC
GCAAGTGAACTCGAGATGGGCAAGATGCTGTGCACGCTTTTGATCGATGT
TGGCTGCAGCGTGGTGGTTCCTAGCGGAACCCAGGTCGAGAACGTCGCCC
AGAGTAAGATGTGGGCGTTGCACCTTGGCATGCTCAAGTGCATAATGACG
TTTTCGGATGATAAGAAAAGTAATATTGGGAGCCCGGCAATATCGCCGAT
GGCAGAAGGAGATGCTGGAGCGGGAGGTTTCTGCTCTGGGGCAGCGGCAA
CGCCGCCGATTGGTCGCCAGGATGAGGTAGGGTTCGAGGAGACCAAGGTA
TCGCCGTCGCACAGGAATGTTCGTGCATCCACTTTTCGTTTGCGTCGAAC
GGTGTCGCCAACAAGAGATCGACGCGTCGCGACTACTGCTGGTTCGGGTC
CTCTCCGAAGTGACTTCAGTGCCGACGAGACGGAAGTGCCGCGCAGACAT
AATCGTACCTCGAGTGCTGTTTCTATTGCTCCTCCATCGTCCGTTGGTGG
CGGCGGCGGGTTTTTCGACGAGATTCCTAGCTTGAGGAGCATTCGATTTT
GGTGGTGTTGTGGGAAGGCCAATTCCGTTGCAACGTAA back to top
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