mRNA_H-paniculata_contig1002.29.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1002.29.1 vs. uniprot
Match: D8LL37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL37_ECTSI) HSP 1 Score: 557 bits (1435), Expect = 1.820e-192 Identity = 271/356 (76.12%), Postives = 296/356 (83.15%), Query Frame = 1 Query: 181 MALVSTEAQLRSMSPGPSRFMTMNLVSVGPCTVSNGVTSYGRTVRRTRTRDNHTTADVDGTRTF-KTSTLNNNKPXXXXXXXXXXXXSLRLHKDTNKPDRQLFHDDIEGSKPKMKSRFQTNRRVNPLEPEYILPSYVPAPNVCPKFTRDSYDVSDIEGTKSRPLYRFAERKNHFIDDIEGAQCGWKPRHSQARHNAPPLDHCLNVGDITGGDFRTRRTTNPLTPSYRVNGMDIADDPVASRPRSLPKARDGPFYPLTTVDIEGAQPGWRPMPQVNPPLETRRHFRNTNFVGDIPGAQADTVEHSICTDRHINPLYPLYASLDGEPLENPQTPLYKEPACVEAEEQLDRTIAVEGAS 1245 MALVSTE QLRSMS GP RFMTMNL+S GPCTVS TSYGRTVRR TRDNHTTADVDG +TF +TSTL N KP S+RLHKDTNKPDRQL+HDDIEGS P+ K F+T R ++PLEPEY LPS+ AP + PKFTRDS+DVSDIEGTKSRPLY +R N +DDIEGAQ GWKPRH +ARH A PLDHCLNV DITGG FRTRR TNPLTPSYRVNGMD+ADDPV SRPR+LPKA+DGPFYPLTT DIEGA PGWRP+PQVNPPLE RRHFRNTNF+GDIPGAQADTV+HSICT RH+NPL P+Y SLDGEPL NPQTPLYKEPACVEAE QLDR+IA E A+ Sbjct: 1 MALVSTETQLRSMSAGPERFMTMNLMSSGPCTVSKKATSYGRTVRRLNTRDNHTTADVDGAQTFVRTSTLTN-KPDSYGVADILGTGSMRLHKDTNKPDRQLYHDDIEGSNPRNKWLFRTTRCIDPLEPEYTLPSFTTAPPIAPKFTRDSHDVSDIEGTKSRPLYPLEQRHNTLVDDIEGAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTQRHVNPLNPVYDSLDGEPLANPQTPLYKEPACVEAEAQLDRSIAAEEAA 355
BLAST of mRNA_H-paniculata_contig1002.29.1 vs. uniprot
Match: A0A6H5K072_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K072_9PHAE) HSP 1 Score: 529 bits (1362), Expect = 1.920e-181 Identity = 261/356 (73.31%), Postives = 285/356 (80.06%), Query Frame = 1 Query: 181 MALVSTEAQLRSMSPGPSRFMTMNLVSVGPCTVSNGVTSYGRTVRRTRTRDNHTTADVDGTRTF-KTSTLNNNKPXXXXXXXXXXXXSLRLHKDTNKPDRQLFHDDIEGSKPKMKSRFQTNRRVNPLEPEYILPSYVPAPNVCPKFTRDSYDVSDIEGTKSRPLYRFAERKNHFIDDIEGAQCGWKPRHSQARHNAPPLDHCLNVGDITGGDFRTRRTTNPLTPSYRVNGMDIADDPVASRPRSLPKARDGPFYPLTTVDIEGAQPGWRPMPQVNPPLETRRHFRNTNFVGDIPGAQADTVEHSICTDRHINPLYPLYASLDGEPLENPQTPLYKEPACVEAEEQLDRTIAVEGAS 1245 MALVSTE QLRSMS GP RFMTMNL+S GPCTVS TSYGRTVRR TRDNHTTADVDG RTF +TSTL N KP S+RLHKDTNKPDRQL+HDDIEGS P+ + RF+T R ++PLEPEY LPS+ A + PKFTRDS+DVSDIEGTKSR AQ GWKPRH +ARH A PLDHCLNV DITGG FRTRR TNPLTPSYRVNGMD+ADDPV SRPR+LPKA+DGPFYPLTT DIEGA PGWRP+PQVNPPLE RRHFRNTNF+GDIPGAQADTV+HSICT+RH+NPL P+Y SLDGEPL NPQTPLYKEPACVEAE QLDR+IA E A+ Sbjct: 1 MALVSTETQLRSMSAGPERFMTMNLMSSGPCTVSKKATSYGRTVRRLNTRDNHTTADVDGARTFVRTSTLTN-KPDSYGVADILGTGSMRLHKDTNKPDRQLYHDDIEGSNPRNQWRFRTTRCIDPLEPEYTLPSFTTATPIAPKFTRDSHDVSDIEGTKSRXXXXXXXXXXXXXXXXXXAQSGWKPRHRRARHEAAPLDHCLNVSDITGGGFRTRRATNPLTPSYRVNGMDVADDPVKSRPRALPKAKDGPFYPLTTADIEGATPGWRPLPQVNPPLEARRHFRNTNFMGDIPGAQADTVKHSICTERHVNPLDPVYDSLDGEPLANPQTPLYKEPACVEAEAQLDRSIAAEEAA 355
BLAST of mRNA_H-paniculata_contig1002.29.1 vs. uniprot
Match: A0A836CFT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT1_9STRA) HSP 1 Score: 340 bits (871), Expect = 1.490e-108 Identity = 169/323 (52.32%), Postives = 210/323 (65.02%), Query Frame = 1 Query: 223 PGPSRFMTMNLVSVGPCTVSNGVTSYGRTVRRTRTRDNHTTADVDGTRTFKTSTLNNNKPXXXXXXXXXXXXSLRLHKDTNKPDRQLFHDDIEGSKPKMKSRFQTNRRVNPLEPEYILPSYVPAPNVCPKFTRDSYDVSDIEGTKSRPLYRFAERKNHFIDDIEGAQCGWKPRHSQARHNAPPLDHCLNVGDITGGDFRTRRTTNPLTPSYRVNGMDIADDPVASRPRSLPKARDGPFYPLTTVDIEGAQPGWRPMPQVNPPLETRRHFRNTNFVGDIPGAQADTVEHSICTDRHINPLYPLYASLDGEPLENPQTPLYKEPA 1191 P P + TMNL + G CTV TS G TVRR TRD D+DG RT +P SLRLH+++NKPD L D+ G + + +T R V+PL+P+Y LPSY AP PKF RDSY V DIEGT +PLYR+ +R+ +CGWKPRH++AR APPLD+ LNV DIT F+T+R TNPL P YR G +IADDPV SRPR+LP ++ PF+ LTT DIEGAQPGW+P Q++PPLE RRH+RNTN+VGDI GA AD+V H+I TDRH++PL PLY SLDGEP+ P +P Y+ A Sbjct: 4 PLPPEYATMNLTAGGVCTVPKEQTSRGWTVRRLATRDVMRVDDIDGARTHIPVANITKRPDLYNVNDISGACSLRLHRESNKPDTTLLCADVNGLTLRRREFLRTERHVDPLDPDYKLPSYTAAPPPQPKFVRDSYSVDDIEGTHPKPLYRYQQREXXXXXXXXXTKCGWKPRHARARAEAPPLDYALNVKDITDSGFKTQRCTNPLVPVYRCYGKEIADDPVESRPRALPPQKNAPFFSLTTADIEGAQPGWKPPTQLHPPLEQRRHWRNTNYVGDIRGASADSVRHAIRTDRHVDPLNPLYRSLDGEPMGGPTSPRYRSAA 326
BLAST of mRNA_H-paniculata_contig1002.29.1 vs. uniprot
Match: F0YFZ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFZ5_AURAN) HSP 1 Score: 259 bits (662), Expect = 1.360e-75 Identity = 127/232 (54.74%), Postives = 158/232 (68.10%), Query Frame = 1 Query: 478 QLFHDDIEGSKPKMKSRFQTNRRVNPLEPEYILPSYVPAPNVCPKFTRDSYDVSDIEGTKSRPLYRFAERKNHFIDDIEGAQCGWKPRHSQARHNAPPLDHCLNVGDITGGDFRTRRTTNPLTPSYRVNGMDIADDPVASRPRSLPKARDGPFYPLTTVDIEGAQPGWRPMPQVNPPLETRRHFRNTNFVGDIPGAQADTVEHSICTDRHINPLYPLYASLDGEPLENPQTP 1173 +L DIEGSKP+ F+T R VNPL PEY LPS PKF RD Y +SDIEGT R +RFA+R+ + + DIEGAQ GW+PRH + R PP+D LNV DI F+T R T+PL P++R+NGM++ DD V + P+ LPK DGP L T DIEGA+ GW+P ++ PPLE RRHFRNTN++GDI GAQ DTV+HSI T R NPL+P Y SLDG+ L +P P Sbjct: 13 RLAETDIEGSKPRP-LHFKTERHVNPLCPEYTLPSCALDMPPVPKFVRDGYGISDIEGTAPRSRFRFAQRETYDVKDIEGAQAGWRPRHERVRREGPPMDS-LNVKDINDIGFKTTRVTDPLRPTHRINGMEVKDDMVRTMPKKLPKPHDGPTLSLYTDDIEGARCGWKPPHEMQPPLEKRRHFRNTNYIGDITGAQPDTVKHSIRTQRETNPLHPAYRSLDGDLLGDPTQP 242
BLAST of mRNA_H-paniculata_contig1002.29.1 vs. uniprot
Match: A0A7S3ZUA3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUA3_9STRA) HSP 1 Score: 234 bits (597), Expect = 5.900e-68 Identity = 132/315 (41.90%), Postives = 178/315 (56.51%), Query Frame = 1 Query: 235 RFMTMNLVSVGPCTVSNGVTSYGRTVRRTRTRDNHTTADVDGTRT-FKTSTLNNNKPXXXXXXXXXXXXSLRLHKDTNKPDRQLFHDD-IEGSKPKMKSRFQTNRRVNPLEPEYILPSYVPAPNVCPKFTRDSYDVSDIEGTKSRPLYRFAERKNHFIDDIEGAQCGWKPRHSQARHNAPPLDHCLNVGDITGGDFRTRRTTNPLTPSYRVNGMDIADDPVASRPRSLPKARDGPFYPLTTVDIEGAQPGWRPMPQVNPPLETRRHFRNTNFVGDIPGAQADTVEHSICTDRHINPLYPLYASLDGEPLENPQTP 1173 RF TM+L S G CT++N R +++ D+DG K +P ++LH +P+ +H++ IEGSKP+ ++RF++NR +PL PEY+LP PKF RD Y V+DI+GT + AQ W+PRH +AR APP D L+V DI F T R T+P+ P Y +NGM+ DDP+ ++PR+LPKA GP+ L T DI GA+ GWRP ++ PP E RRH+R+TNFVGDI GAQADTV+H+I T R NPL P Y SLDG+ L +P P Sbjct: 10 RFQTMSLQSAGACTIANKE-------RPACAHESNYVGDIDGAAPELKYMRYTARRPDLYVTKDIEKSSPMKLHARGPQPNPNEWHNNPIEGSKPR-ETRFKSNRHTDPLAPEYVLPRCKLEKPPTPKFIRDGYTVTDIDGTVPKXXXXXXXXXXXXXXXXXXAQASWRPRHERARREAPPRDG-LDVRDIMDEGFTTTRVTDPMNPHYFMNGMETCDDPIRTKPRALPKAIPGPYRSLYTDDILGAKSGWRPPHEMQPPPEKRRHWRHTNFVGDIGGAQADTVQHTIPTKRRTNPLNPAYRSLDGDILPDPTKP 315
BLAST of mRNA_H-paniculata_contig1002.29.1 vs. uniprot
Match: A0A7S1UJ89_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ89_9STRA) HSP 1 Score: 223 bits (569), Expect = 7.290e-63 Identity = 139/322 (43.17%), Postives = 175/322 (54.35%), Query Frame = 1 Query: 238 FMTMNLVSVGPCTVSNGVTSYGRTVRRTRTRDNHTTADVDGTRTFKTSTLNNNKPXXXXXXXXXXXXSLRLHKDTNKPDRQLFHDDIEGSKPKMKSRFQTNRRVNPLEPEYILPSYVPAPNVCPKFTRDSYDVSDIEGTKSRPLYRFAERKNHFIDDIEGAQCGWKPRHSQARHNAPPLDHCLNVGDITGGDFRTRRTTNPLTPSYRVNGMDIADDPVASRPRSLPKARDGPFYPLTTVDIEGAQPGWRPMPQVNPPLETRRHFRNTNFVGDIPGAQADTVEHSICTDRHINPLYPLYASLDGEPLENPQTPLYKEPACVEA 1203 + TMN+ + GPCTV R V T+TR + T D+DG + F T NKP XXXXXX + T RRV+PL P Y LPS+ AP D+ V DI GT S+PLY F +R NH +DDIEGAQ GWKPR+ L+V DI F++ R T+P P + VNGM I DD P+ LP ++ PF+ L + DIEGA GW P + P +E RRHFRNTNFVGDI GAQ+DTV+H+I T R++NPL P Y SLDG L+ P P+Y +PA +EA Sbjct: 9 WQTMNITTSGPCTVETA----NRLV--TKTRATNRTDDIDGAKPFLRYTQFTNKPDSFQIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPSRFLSTKRRVDPLVPTYTLPSFRKAPAPEQPHYSDTMKVEDIAGTHSKPLYPFPQRINHKVDDIEGAQSGWKPRYRNV-FMTEERPSSLDVSDIAKEGFKSTRVTDPNRPVHYVNGMTIQDDLRYCMPKRLPPQKNTPFFSLQSNDIEGAVSGWVPPHALRPAIEDRRHFRNTNFVGDIEGAQSDTVKHTIRTKRNVNPLNPYYRSLDGILLDPPCRPMYHDPAVLEA 323
BLAST of mRNA_H-paniculata_contig1002.29.1 vs. uniprot
Match: A0A2D4CDY6_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDY6_PYTIN) HSP 1 Score: 197 bits (500), Expect = 1.080e-52 Identity = 125/281 (44.48%), Postives = 153/281 (54.45%), Query Frame = 1 Query: 337 HTT---ADVDGTRTFKTSTLNNNKPXXXXXXXXXXXXSLRLHKDTNKPDRQLFHDD------IEGSKPKMKSRFQTNRRVNPLEPEYILPSYVPAPNVCPKFTRDSYDVSDIEGTKSRPLYRFAERKNHFIDDIEGAQCGWKPRHSQARHNAPPLDHCLNVGDITGGDFRTRRTTNPLTPSYRVNGMDIADDPVASRPRSLPKARDGPFYPLTTVDIEGAQPGWRPMPQV-NPPLETRRHFRNTNFVGDIPGAQADTVEHSICTDRHINPLYPLYASLDGE 1149 HTT +D+ G R + NKP S LH R++ DD IEGS P+ S F+TNR VNP+EPEY LPS+ AP + PKF RDSYDVSDI GT +P R +DDI GAQ GW P H +A PP D L+V DI DF++ R T+ L P Y+VNGM DD + S P+ L R+ P Y T DI GA P V N P E RRHFR TN DI GA ADTV HSI ++R ++P +P Y +LDG+ Sbjct: 43 HTTNDISDIAGARPLLKDHVYVNKPHFHEPNDIPGSCSKELHP----KHRRVGSDDRFKQLHIEGSSPRP-SGFRTNRVVNPMEPEYKLPSFQAAPPLIPKFLRDSYDVSDIAGTSFKPKVITNPRSPLRVDDIAGAQAGWLPFHRRASREHPPRD-ILDVADIVNVDFKSSRVTDVLNPVYKVNGMTYQDDAL-SHPKLLHPQRNKPSYAXQTADIAGANPFDASKTVVGNIPNEKRRHFRQTNRTDDITGATADTVMHSIRSNRRVDPTWPDYVALDGQ 316
BLAST of mRNA_H-paniculata_contig1002.29.1 vs. uniprot
Match: A0A7S2DC98_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DC98_9STRA) HSP 1 Score: 191 bits (485), Expect = 6.550e-52 Identity = 91/181 (50.28%), Postives = 116/181 (64.09%), Query Frame = 1 Query: 616 TRDSYDVSDIEGTKSRPLYRFAERKNHFIDDIEGAQCGWKPRHSQARHNAPPLDHCLNVGDITGGDFRTRRTTNPLTPSYRVNGMDIADDPVASRPRSLPKARDGPFYPLTTVDIEGAQPGWRPMPQVNPPLETRRHFRNTNFVGDIPGAQADTVEHSICTDRHINPLYPLYASLDGEPLE 1158 T Y G K L+RF R H + DIEG Q GW+PRH+ AR P+ + L+V DI F+++R PL P Y+++GM + DD + PR LPKA + +Y L + DI GA GW+P Q+ PP+E RRHFRNTNF+GDIPGAQ DTV H++ TDR NPL P+Y SLDGEPLE Sbjct: 11 THIMYTTLRAHGQKK--LHRFEMRDTHTVTDIEGTQPGWRPRHANARRQNNPIRNELDVKDINDTGFKSQRMNCPLRPEYKIHGMTVGDDMSKTMPRKLPKAAEHEYYSLKSDDITGATCGWKPPVQIYPPMEARRHFRNTNFIGDIPGAQPDTVNHAMRTDRVTNPLEPVYRSLDGEPLE 189
BLAST of mRNA_H-paniculata_contig1002.29.1 vs. uniprot
Match: A0A2P4X5K5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X5K5_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.440e-51 Identity = 106/209 (50.72%), Postives = 129/209 (61.72%), Query Frame = 1 Query: 529 FQTNRRVNPLEPEYILPSYVPAPNVCPKFTRDSYDVSDIEGTKSRPLYRFAERKNHFIDDIEGAQCGWKPRHSQARHNAPPLDHCLNVGDITGGDFRTRRTTNPLTPSYRVNGMDIADDPVASRPRSLPKARDGPFYPLTTVDIEGA---QPGWRPMPQVNPPLETRRHFRNTNFVGDIPGAQADTVEHSICTDRHINPLYPLYASLDG 1146 F TNR VNPLEP Y LPS+ AP+V PKF RDSY+VSDIEGT + R ++DI GAQ GW PRH + PP D LNV DIT DF++ R TN L P Y VNGM IADDP+ SRP + RD P + L T DI+GA P + + + RR FR+TN DI GA+ADT+ HSI + RHI+P+ P Y+ LDG Sbjct: 50 FHTNRVVNPLEPNYKLPSFTKAPSVEPKFLRDSYNVSDIEGTSIKIRDIQHPRDGLKLNDIAGAQAGWLPRHKRGLRENPPRD-ILNVTDITNVDFKSSRVTNVLNPVYSVNGMTIADDPL-SRPLAQHPKRDKPNFTLRTDDIDGAGCSDPATAIVAGII--MSKRRDFRDTNVTSDITGAKADTLLHSIRSTRHIDPISPKYSGLDG 254
BLAST of mRNA_H-paniculata_contig1002.29.1 vs. uniprot
Match: G4Z4F7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z4F7_PHYSP) HSP 1 Score: 188 bits (477), Expect = 2.330e-49 Identity = 107/209 (51.20%), Postives = 129/209 (61.72%), Query Frame = 1 Query: 529 FQTNRRVNPLEPEYILPSYVPAPNVCPKFTRDSYDVSDIEGTKSRPLYRFAERKNHFIDDIEGAQCGWKPRHSQARHNAPPLDHCLNVGDITGGDFRTRRTTNPLTPSYRVNGMDIADDPVASRPRSLPKARDGPFYPLTTVDIEGAQ---PGWRPMPQVNPPLETRRHFRNTNFVGDIPGAQADTVEHSICTDRHINPLYPLYASLDG 1146 F+T+R VNPLEP Y LPS+V AP + PKF RDSY+VSDIEGT + R +DDI G QCGW PRH + PP D LNV DIT DFR+ R TN L P Y VNGM ADDP+ SRP RD P Y L T DIEGA P + + + RR+FR+TN DI GA+ADT+ HSI + R ++P PLY++LDG Sbjct: 109 FRTDRVVNPLEPNYKLPSFVKAPPLEPKFLRDSYNVSDIEGTSIKIRDIQHPRDGLKVDDIAGTQCGWLPRHKRGLRENPPRD-ILNVQDITNVDFRSSRVTNVLNPVYTVNGMTFADDPL-SRPLVQHPKRDKPNYALKTDDIEGASCADPATAIVAGIV--MAHRRNFRDTNVTKDITGAKADTLLHSIRSTRRVDPNAPLYSALDG 313 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1002.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1002.29.1 >prot_H-paniculata_contig1002.29.1 ID=prot_H-paniculata_contig1002.29.1|Name=mRNA_H-paniculata_contig1002.29.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=588bp MALVSTEAQLRSMSPGPSRFMTMNLVSVGPCTVSNGVTSYGRTVRRTRTRback to top mRNA from alignment at H-paniculata_contig1002:5828..8366+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1002.29.1 ID=mRNA_H-paniculata_contig1002.29.1|Name=mRNA_H-paniculata_contig1002.29.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2539bp|location=Sequence derived from alignment at H-paniculata_contig1002:5828..8366+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1002:5828..8366+ >mRNA_H-paniculata_contig1002.29.1 ID=mRNA_H-paniculata_contig1002.29.1|Name=mRNA_H-paniculata_contig1002.29.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3528bp|location=Sequence derived from alignment at H-paniculata_contig1002:5828..8366+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |