mRNA_H-paniculata_contig10017.25.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10017.25.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE) HSP 1 Score: 180 bits (456), Expect = 8.390e-53 Identity = 94/181 (51.93%), Postives = 120/181 (66.30%), Query Frame = 3 Query: 102 QQPSVLVLVVFKCYRHGMFLATLAKDATMDTVLIPGGLTPLVQLLDRMLNKKMKRRLRTK*TAWAASAKADPKIGKLAAPRSSIVSTWVKEVWAAVRMDMVKICFRVCGLRLNLDGSEDHEWCEHTLSKDYRNLLTEQRAAWEKAHGNM-LSPLQLLVVPDKVSTSNPITDAANQVAHKML 641 Q+ +LVL FKC++ F+A L +DA + IPGG TPL+Q LDRMLNK+MKR LR K TA++ASA AD + GKL P +VSTW K+ W ++ + VK CF++CGL L LDGSEDH WCEH +DYR+LL EQ A W H ++ L PL+L VP SNPIT A +V K+L Sbjct: 36 QRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGFD-SNPITAAQKEVEGKLL 215
BLAST of mRNA_H-paniculata_contig10017.25.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 185 bits (470), Expect = 1.590e-52 Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = 3 Query: 102 QQPSVLVLVVFKCYRHGMFLATLAKDATMDTVLIPGGLTPLVQLLDRMLNKKMKRRLRTK*TAWAASAKADPKIGKLAAPRSSIVSTWVKEVWAAVRMDMVKICFRVCGLRLNLDGSEDHEWCEHTLSKDYRNLLTEQRAAWEKAHGNM-LSPLQLLVVPDKVSTSNPITDAANQVAHKML 641 Q+P +LVL FKC++ F+A L +DA + IPG LTPL+Q LDRMLNK+MKR LR K TA++ASA AD + GKL P +VSTW KE W + + VK CF +CGL L LDGSEDH WCEH +DYR+LL EQRA W H ++ L PL+L VP SNPIT A +V K+L Sbjct: 252 QRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGGFD-SNPITAAQKEVEGKLL 431
BLAST of mRNA_H-paniculata_contig10017.25.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE) HSP 1 Score: 178 bits (451), Expect = 6.710e-51 Identity = 92/181 (50.83%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 102 QQPSVLVLVVFKCYRHGMFLATLAKDATMDTVLIPGGLTPLVQLLDRMLNKKMKRRLRTK*TAWAASAKADPKIGKLAAPRSSIVSTWVKEVWAAVRMDMVKICFRVCGLRLNLDGSEDHEWCEHTLSKDYRNLLTEQRAAWEKAHGNM-LSPLQLLVVPDKVSTSNPITDAANQVAHKML 641 Q+P +LVL KC+++ F+A L +DA + IPGGLTPL+Q LDRMLNK+MKR LR K TA++ SA AD + GKL P +VSTW KE W ++ + VK CF++CGL L LDGSEDH WC+H +D +LL EQ A W H ++ L PL+L VP SNPIT A +V K+L Sbjct: 133 QRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGFD-SNPITAAQKEVEGKLL 312
BLAST of mRNA_H-paniculata_contig10017.25.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 177 bits (450), Expect = 7.340e-51 Identity = 95/181 (52.49%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 102 QQPSVLVLVVFKCYRHGMFLATLAKDATMDTVLIPGGLTPLVQLLDRMLNKKMKRRLRTK*TAWAASAKADPKIGKLAAPRSSIVSTWVKEVWAAVRMDMVKICFRVCGLRLNLDGSEDHEWCEHTLSKDYRNLLTEQRAAWEKAHGNM-LSPLQLLVVPDKVSTSNPITDAANQVAHKML 641 Q+P +LVL FKC++ F+A L +DA + IPGGLTPL+Q LD LNK+MKR LR K TA+++SA AD + GKL P IVSTW KE W ++ + VK CF++CGL L LDGSEDH WC H +DYR+LL EQ A W H N+ L PL+L VP SNPIT A +V K+L Sbjct: 97 QRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPGGFD-SNPITAAQKEVEGKLL 274
BLAST of mRNA_H-paniculata_contig10017.25.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 182 bits (462), Expect = 4.360e-50 Identity = 94/181 (51.93%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 102 QQPSVLVLVVFKCYRHGMFLATLAKDATMDTVLIPGGLTPLVQLLDRMLNKKMKRRLRTK*TAWAASAKADPKIGKLAAPRSSIVSTWVKEVWAAVRMDMVKICFRVCGLRLNLDGSEDHEWCEHTLSKDYRNLLTEQRAAWEKAHGNM-LSPLQLLVVPDKVSTSNPITDAANQVAHKML 641 Q+P +LVL F+C++ F+A L +D + IPGGLTPL LDRMLNK+MKR LR K TA++ASA AD + GKL P +VSTW KE W ++ + VK CF++CGL L LDGSEDH WCEH +DYR+LL EQ A W H ++ L PL+L VP SNPIT A +V K+L Sbjct: 426 QRPCILVLDDFRCHKDEGFIAALNRDPNTIVIFIPGGLTPLFHPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGFD-SNPITAAQKEVEGKLL 605
BLAST of mRNA_H-paniculata_contig10017.25.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE) HSP 1 Score: 173 bits (439), Expect = 7.100e-50 Identity = 91/181 (50.28%), Postives = 116/181 (64.09%), Query Frame = 3 Query: 102 QQPSVLVLVVFKCYRHGMFLATLAKDATMDTVLIPGGLTPLVQLLDRMLNKKMKRRLRTK*TAWAASAKADPKIGKLAAPRSSIVSTWVKEVWAAVRMDMVKICFRVCGLRLNLDGSEDHEWCEHTLSKDYRNLLTEQRAAWEKAHGNM-LSPLQLLVVPDKVSTSNPITDAANQVAHKML 641 Q+P +LVL FKC + F+A L +DA + IPGGLTPL+Q LDR+LNK+MKR LR K TA++ASA AD + GKL P +VSTW E W ++ + VK CF++CGL L LDG EDH W EH +DYR+LL EQ A W H + L PL+L VP NPIT A +V K++ Sbjct: 36 QRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKTCFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVWLAEHPDATLPPLKLPEVPGGFDF-NPITGAQKEVEEKLM 215
BLAST of mRNA_H-paniculata_contig10017.25.1 vs. uniprot
Match: A0A6H5K0T0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T0_9PHAE) HSP 1 Score: 165 bits (418), Expect = 1.200e-47 Identity = 86/163 (52.76%), Postives = 106/163 (65.03%), Query Frame = 3 Query: 156 FLATLAKDATMDTVLIPGGLTPLVQLLDRMLNKKMKRRLRTK*TAWAASAKADPKIGKLAAPRSSIVSTWVKEVWAAVRMDMVKICFRVCGLRLNLDGSEDHEWCEHTLSKDYRNLLTEQRAAWEKAHGNM-LSPLQLLVVPDKVSTSNPITDAANQVAHKML 641 F+A L +DA + IPGGLTPL+Q LDRMLNK+MKR LR K TA++ASA AD GKL P +VSTW KE W ++ VK CF++CGL L LDG EDH WCEH ++ R+LL EQ A W H ++ L PL+L VP NPITDA +V K+L Sbjct: 10 FIAALKRDANTTVIFIPGGLTPLLQALDRMLNKQMKRLLRGKYTAYSASAVADALSGKLKPPERGVVSTWCKEAWESITPKTVKTCFKICGLTLALDGREDHAWCEHNFGENCRDLLDEQHAVWLAEHPDVTLPPLKLPKVPGGFDF-NPITDAQKEVEGKLL 171
BLAST of mRNA_H-paniculata_contig10017.25.1 vs. uniprot
Match: A0A6H5JTI5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI5_9PHAE) HSP 1 Score: 163 bits (413), Expect = 3.100e-47 Identity = 77/146 (52.74%), Postives = 99/146 (67.81%), Query Frame = 3 Query: 102 QQPSVLVLVVFKCYRHGMFLATLAKDATMDTVLIPGGLTPLVQLLDRMLNKKMKRRLRTK*TAWAASAKADPKIGKLAAPRSSIVSTWVKEVWAAVRMDMVKICFRVCGLRLNLDGSEDHEWCEHTLSKDYRNLLTEQRAAWEKAH 539 Q+P +LVL FKC++ F+A L +DA + IPGGLTPLVQ LDRMLNK+MKR L K TA++ASA D + GKL P +VSTW KE W ++ + VK CF++CGL L LDG EDH WC+H +D+R+LL E+ A W H Sbjct: 36 QRPCILVLDDFKCHKAEGFMAALKRDANTMVIFIPGGLTPLVQPLDRMLNKQMKRLLWGKYTAYSASAVIDARSGKLKPPERGVVSTWCKEAWESINPETVKTCFKICGLTLALDGGEDHAWCQHNFGEDHRDLLEERHAVWLAEH 181
BLAST of mRNA_H-paniculata_contig10017.25.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE) HSP 1 Score: 166 bits (420), Expect = 5.280e-47 Identity = 88/172 (51.16%), Postives = 113/172 (65.70%), Query Frame = 3 Query: 102 QQPSVLVLVVFKCYRHGMFLATLAKDATMDTVLIPGGLTPLVQLLDRMLNKKMKRRLRTK*TAWAASAKADPKIGKLAAPRSSIVSTWVKEVWAAVRMDMVKICFRVCGLRLNLDGSEDHEWCEHTLSKDYRNLLTEQRAAWEKAHGNM-LSPLQLLVVPDKVSTSNPITDA 614 Q+P +LVL FKC++ F+A L +DA + IPGG+T L+Q LDR+LNK+MKR LR K TA++ASA AD + GKL P +VSTW KE W ++ + VK CF +C L L LDGSEDH WCEH +DYR+LL EQ A H ++ L PL+L VP + NPIT A Sbjct: 113 QRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFMICRLTLALDGSEDHAWCEHNFGEDYRDLLGEQHAVRLAEHPDVTLPPLKLPKVPGRFDP-NPITAA 283
BLAST of mRNA_H-paniculata_contig10017.25.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.260e-46 Identity = 85/160 (53.12%), Postives = 108/160 (67.50%), Query Frame = 3 Query: 102 QQPSVLVLVVFKCYRHGMFLATLAKDATMDTVLIPGGLTPLVQLLDRMLNKKMKRRLRTK*TAWAASAKADPKIGKLAAPRSSIVSTWVKEVWAAVRMDMVKICFRVCGLRLNLDGSEDHEWCEHTLSKDYRNLLTEQRAAWEKAHGNM-LSPLQLLVVP 578 Q+P +LVL FKC++ F+A L +DA + IPGGLTPL+Q LDRMLNK+ KR LR+K TA++ASA D + GKL P +VSTW K W ++ + VK CF++CGL L LDGSEDH WC H +DYR+LL EQ A W H N+ L PL+L VP Sbjct: 186 QRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASA-TDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVP 344 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10017.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10017.25.1 >prot_H-paniculata_contig10017.25.1 ID=prot_H-paniculata_contig10017.25.1|Name=mRNA_H-paniculata_contig10017.25.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp MDMVKICFRVCGLRLNLDGSEDHEWCEHTLSKDYRNLLTEQRAAWEKAHGback to top mRNA from alignment at H-paniculata_contig10017:3853..4565- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10017.25.1 ID=mRNA_H-paniculata_contig10017.25.1|Name=mRNA_H-paniculata_contig10017.25.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=713bp|location=Sequence derived from alignment at H-paniculata_contig10017:3853..4565- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10017:3853..4565- >mRNA_H-paniculata_contig10017.25.1 ID=mRNA_H-paniculata_contig10017.25.1|Name=mRNA_H-paniculata_contig10017.25.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=642bp|location=Sequence derived from alignment at H-paniculata_contig10017:3853..4565- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |