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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 648 |
| Cds size | 324 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10013.23.1 >prot_H-paniculata_contig10013.23.1 ID=prot_H-paniculata_contig10013.23.1|Name=mRNA_H-paniculata_contig10013.23.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp
MVEEKKHKKSSTSVSTLSSSATVAEAAAEAAAATAAATAAATAAATAAAT
ATSQQQQQQQQQSPPQKQAKERSRDTKRQKRGQEQSQKKEIVQDEAKRQN
ENKVTNR* back to topmRNA from alignment at H-paniculata_contig10013:439..3988+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10013.23.1 ID=mRNA_H-paniculata_contig10013.23.1|Name=mRNA_H-paniculata_contig10013.23.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3550bp|location=Sequence derived from alignment at H-paniculata_contig10013:439..3988+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTGTATTCGGGAAGGCCGTGAGTGTCAAGCCAGGGAAACTGGGGACAA
AGGCAGGAAAAATCAAGGGCAAAGGAGGGGCCTATCTGCTGAGGTTCGTT
TTCTCATCCTTGGTTGGTAGCCCTAACCAAAGCCTAATCCCAATCAATCA
TTATCTGAGGGGACATGTATCTGTCAGTTTCGACACCTAGTATGCCCCCT
CCCACTCTCCCTGTCCGCTTGTTTTTACTCGGACGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTAGCATTTGTTTTTCTCTTTTTGGCAATTTC
CAATAGGGCTGTGTAGCAGTCATGGGATATATGCACGAATACATGGGTCG
GCCGGAGAAGCCGATGTATTGATACATGACCAGTTTCGTGGTCATGTATC
GGTGTGGGCGAAGGGAGCTAGCCACGCGAAGCGCCAGGCGAGCACTTCAG
CGCGAGCCCTAACGTTTCCCTCCTCGGCTGGATAGGGGGCATCGCCGCAG
CGCCACTAGAGGTAGAAAAATTGCCCGTTTTGACTTCATCTCTCTTCGAC
ATGAAGGATCTAGAGTACCTCTTGGAGGCAGCCTGAAGTCGAGTTGGCGG
AGTATTTTTTGGAGAAAAACGAGAATTTCTAACCACACAAGAATTCTAAT
ATAGAACACTTCGTGACTTCGCAAGTCATTCGGTGGGCTATTGATAACGG
AAACGAGACGAAAGCGCGTCAGGCACTATGTCTTCGGCGTGCTAGAGGTC
GGGCGGAAGTCATATGTGTGGTATGCTGTTTCGCGGCGTGTGCTGTGACA
CTTTTTCGTTTCTGTGGTGCTGTGAGCTGTTGGAGCACGACTAAATCATG
TGCACATTCAGTAGATTATGACCATACTAGTCGAGAATTATATCTATCGA
TGCTGTCCAACGGCTACCCTATTACCCCCCCCCCCATCCACCCCCCCACC
CACCCACTCATCCCTATTGGTCATGATCTAATTTTACTGATATGTATAAA
CAAGTTCAGTTTGAAATTAGCTGTATAACCTCTGAATGGGTACAGCGGAG
TTATTACATGAGCCTCAGAGCTATAGTTCAACTGGCTGGCAGGGTTGACC
TACGAATGAAAACTACTGCCCCCAACAGGTCATCATCGCCACGCTCAGGA
GGGGGCGGCGCGGGCGGTGGTGCGTCTCTGAAACGGAGCGCGGCGCACTT
GGCTAACCTGAAGCGCGCTAGAGTGGATGACGAAGATGGAGAGGAGGAAA
CCTCCGAGCCGCCCATGGTTGAGGAAAAAGTTAGTTCGTACTTTGTGTGT
AATGTGTGATGACTTGTGAAAGTACAGGCAGGGAGTGCCTGCGCACCGTG
CAATCCATGTTGTACCCTGGCACGTGATTATGTATGTATGTATGTATATA
TGTATGTGTGTACCCTGAAAACACAATCGCCCCGGGGCTGGGTATCAAAG
AAAGCGATAAAAAGGAAAAGCGCCCAATGGGAGGACATCGAACGCCCCGG
GGCAATCGATTTTTCTGCAGCATAGTCATGATTCATCAATTAGACGTCGA
CTATGGTGCGTATTTCGTGGGTACATCGACATGATGAGGAAATCACTTGG
TGCAGGAAACAAGCACTAGTGTCGAGAGAAATAAGTGTTATTATTACATT
ACTTCCTCTGTGCCATAAGTCAAAGTTTTTTGAAGGAGCACTTGAGCATC
TTCATTTTTTATTTTTTTTTATTTAAAGTTATAATCCTACGCATGTTTTT
TACGGTTAGTCACCAAAATTTCACGTAAATAGGCAAAGCCCATCGGATGT
ATGCGTGGCGCAGAAAAGAGAAATCGGCTGGAAAAAAAGGCTGTATTTTG
TACCTTTTCGTTTTTTCCCAATGTAATAACGTGAAATATCGGAAGAAACG
CAAAAGCGGTCACAGTAAGCTCAGCCTTGAGCGGCCATTAATCCTCATGA
ACAGATCGGAACGGTTTGTGGAAAAGCGCATATGAGTCTATCAAATTTTA
GCTTTCCAGTAATTCCAACCATAGCCTCTGAAAAACATGGATCATGGGGA
GTACATGTGTATTTTTTCATGTACATCCATTCTATACACGCCTCCGTGAA
AATCCCTCTCTGTCCCCTCTTGCACACGTGCAGTACCGTACTACCGACAG
TAGTCAATGGTCTACATACAACGAACGCCCTCGACGAAATCACCTCGCGA
ATTGTGTTTGTCGCTAGAAACTACATGGAGCTGTCGCGTTTTTAGAGCCA
ACCTAGTACCGACAGTACATGCAGCACAGACAGGTGGTTGGCACGTCTCG
GCGCACATCTCGGCGCACAACGAGTGGAGCGTTCTACATAAAACGAACGC
CCTCGACAAAATCATCGCGCGAATTGTGTTTATCGCTAGAACTGCAGGGA
GCTTTGTTCCGAAGCAACCTTTTGAAACAATTGTAACCGCTTCGGGATCG
TTACTTTCGAGACATCGCTCAAGTTTCACGTACGTCCGATTCGTGTCGAA
AATCAGCAGTTTTTCGAGAATCCCAAAGGAGTGAAATAGTCCCTCAATGC
AAATCTGCGATGATGAATTGTGTGCCGAGGTTTGATATAGCTTTTTTTTC
TATCATTATATGAAGGATTCCCCCCCCCCCCCCAAAACAGATTGTAAAGG
GCTGCGCGTCCCGAAAGGAGTGAAGGCGAGGCAAGGGTTTGAGGCGGGAT
TTATCGTTTTGCGAACACTCCAAGTGTATTTCGTTTTATCGCTCTTTCTA
GTTGTTCTTGTGGTACAAAGTGGGTGTCAGTCAGCCTCAGCCATTCCCGG
CACGCCTCACGATCTGTAGGAGAACCCTCTGTCTTGCTCGGGTCGTTGTC
CAACCTTCTCCGGGCTATGTCATACTCTTGGGTAGAGTGGGCGAGCAAGG
TGGACGAGCGTACCCACTGACTGTGGCACTTCGTCCGGAGTTCGACCTAA
TCCAATCTACCTTTTTTTTCTTCCAGAATCACGAGACACTGAGATCTATC
TACTGTAGTATTCATGTAGAGTTGCCTTTCGCTGGCGCCTAATGTGGCGT
AATGGTGAAAGCTACCGTGACGTTTGTTAATGCCTTCAATAGAATTGGTC
TTGTTTTCGTTTCGTTTTTTTTTTTTGCAGAAACATAAAAAATCATCCAC
ATCAGTATCAACATTATCATCATCAGCAACAGTAGCAGAAGCAGCAGCTG
AAGCAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCA
ACAGCAGCAGCAACAGCAACATCAGCAGCAACAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAACAGTCTCCTCCGCAAAAGCAAGCAAAGGAACGTTCA
AGAGACACGAAGAGACAGAAGCGCGGCCAGGAACAGTCGCAAAAGAAGGA
GATAGTGCAAGACGAGGCGAAGCGGCAGAACGAGAACAAGGTGACAAACA
GATAGGCAGCGGAAGCAGAATAGCAGCAGGAGGCAGAGAATCGGCGTCGT
CGGTTGGCCAAGGGGAAGCAGCGGCCGCGAGCAGGTTGGTCGCAGGGAGA
back to topCoding sequence (CDS) from alignment at H-paniculata_contig10013:439..3988+ >mRNA_H-paniculata_contig10013.23.1 ID=mRNA_H-paniculata_contig10013.23.1|Name=mRNA_H-paniculata_contig10013.23.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at H-paniculata_contig10013:439..3988+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTGAGGAAAAAATGGTTGAGGAAAAAAAACATAAAAAATCATCCAC
ATCAGTATCAACATTATCATCATCAGCAACAGTAGCAGAAGCAGCAGCTG
AAGCAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCA
ACAGCAGCAGCAACAGCAACATCAAAACATAAAAAATCATCCACATCAGT
ATCAACATTATCATCATCAGCAACAGTAGCAGAAGCAGCAGCTGAAGCAG
CAGCAGCAACAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAACAGCA
GCAGCAACAGCAACATCACAGCAGCAGCAGCAGCAGCAGCAACAGTCTCC
TCCGCAAAAGCAAGCAAAGGAACGTTCAAGAGACACGAAGAGACAGAAGC
GCGGCCAGGAACAGTCGCAAAAGAAGGAGATAGTGCAAGACGAGGCGAAG
CGGCAGAACGAGAACAAGGTGACAAACAGATAGCAGCAGCAGCAGCAGCA
GCAGCAACAGTCTCCTCCGCAAAAGCAAGCAAAGGAACGTTCAAGAGACA
CGAAGAGACAGAAGCGCGGCCAGGAACAGTCGCAAAAGAAGGAGATAGTG
CAAGACGAGGCGAAGCGGCAGAACGAGAACAAGGTGACAAACAGATAG back to top
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