mRNA_H-paniculata_contig10012.22.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A6H5L0C8_9PHAE (Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C8_9PHAE) HSP 1 Score: 251 bits (642), Expect = 8.830e-77 Identity = 122/155 (78.71%), Postives = 137/155 (88.39%), Query Frame = 1 Query: 1 VPQGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGLGEVK 465 V +GK SNYDTD+FVPIFEAI + TGAR YTGKVG+ED DN+DMAYRVVADHIRTL+IAITDG PSNDGRGYVLRR+LRRA+RYG QVLGGKPGFFHTLVPVVV +K IFPELVDAE RV V++DEEM+FN+TLDKGLKEFNK+A LG+ K Sbjct: 165 VIEGKMSNYDTDVFVPIFEAISSATGARPYTGKVGEEDSDNMDMAYRVVADHIRTLTIAITDGCTPSNDGRGYVLRRVLRRAIRYGQQVLGGKPGFFHTLVPVVVGLMKGIFPELVDAEARVTAVIKDEEMSFNKTLDKGLKEFNKVAAALGDSK 319
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI) HSP 1 Score: 253 bits (646), Expect = 5.800e-76 Identity = 122/153 (79.74%), Postives = 137/153 (89.54%), Query Frame = 1 Query: 7 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGLGEVK 465 QGK SNYDTD+FVPIFEAI++ TGAR YTGKVG+ED DN+DMAYRVVADHIRTL+IAITDG PSNDGRGYVLRR+LRRA+RYG QVLGGKPGFFHTLVPVVV +K IFPELVDAE RV V++DEEM+FN+TLDKGLKEFNK+A LG+ K Sbjct: 278 QGKMSNYDTDVFVPIFEAIRSATGARPYTGKVGEEDSDNMDMAYRVVADHIRTLTIAITDGCTPSNDGRGYVLRRVLRRAIRYGQQVLGGKPGFFHTLVPVVVGLMKGIFPELVDAEARVTAVIKDEEMSFNKTLDKGLKEFNKVAAALGDSK 430
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A7S2Y168_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y168_9STRA) HSP 1 Score: 218 bits (556), Expect = 4.390e-66 Identity = 106/146 (72.60%), Postives = 122/146 (83.56%), Query Frame = 1 Query: 7 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIA 444 QGK SNYDTDIF PIF+AI+ VTGAR+YTGKVG ED DN DMAYRVVADH+RTL+ AITDG PSNDGRGYVLRR+LRR VRYG Q+LG KPGFF+TLVPVVV +K+ FPEL + V+ V+ +EE +FNRTLDKGLKEF+K A Sbjct: 299 QGKDSNYDTDIFQPIFKAIQEVTGARTYTGKVGAEDTDNKDMAYRVVADHVRTLTFAITDGAVPSNDGRGYVLRRVLRRGVRYGQQILGAKPGFFNTLVPVVVQQMKDFFPELEPKQDFVISVISEEEASFNRTLDKGLKEFSKKA 444
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A6V2XN65_HETAK (Alanine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XN65_HETAK) HSP 1 Score: 221 bits (563), Expect = 2.670e-64 Identity = 109/146 (74.66%), Postives = 122/146 (83.56%), Query Frame = 1 Query: 7 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIA 444 QGKTSNYDTDIF PIF AI+ VTGAR YTGK+ ED DNVDMAYRVVADHIRTL+ AITDG PS+DGRGYVLRR+LRR VRYG QVLGG PGFFH LVPVVV +K FPEL + VMDV+++EE +FN+TLDKGL+EFNKIA Sbjct: 265 QGKTSNYDTDIFQPIFRAIQQVTGARDYTGKIEAEDTDNVDMAYRVVADHIRTLTFAITDGAVPSSDGRGYVLRRVLRRGVRYGQQVLGGPPGFFHQLVPVVVGLMKGAFPELEGRQAFVMDVIKEEEESFNKTLDKGLREFNKIA 410
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A835Z4U5_9STRA (Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U5_9STRA) HSP 1 Score: 220 bits (561), Expect = 5.290e-64 Identity = 108/146 (73.97%), Postives = 121/146 (82.88%), Query Frame = 1 Query: 7 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIA 444 QGK SNYDTD+F+PIF I++VTGAR Y+GKVG+ED D VDMAYRVVADHIRTL+ AITDG PSNDGRGYVLRRILRR VRYG Q+LG KPGFFH LVPVVV LK FPEL + VMD+L+DEE FNRTLDKGL+EF+K A Sbjct: 264 QGKDSNYDTDVFMPIFGVIQSVTGARPYSGKVGEEDTDTVDMAYRVVADHIRTLTFAITDGAVPSNDGRGYVLRRILRRGVRYGQQILGAKPGFFHQLVPVVVNMLKGAFPELKNRVSFVMDILKDEETAFNRTLDKGLREFSKAA 409
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A7S4GJP2_9EUGL (Alanine--tRNA ligase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GJP2_9EUGL) HSP 1 Score: 209 bits (532), Expect = 6.870e-60 Identity = 98/149 (65.77%), Postives = 118/149 (79.19%), Query Frame = 1 Query: 7 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGL 453 Q K SNYDTDIF PIFEAI+ TGAR Y GK+G+ED DN+DMAYRVVADHIRTL+ AI DG PSN+GRGYVLRR+LRRAVRYG QVLGGKPGFFH LVP +V ++K+ FP++V+ VM +++DEE FN+TL KG+ F K+ L Sbjct: 329 QNKDSNYDTDIFTPIFEAIQEATGARPYAGKLGEEDPDNIDMAYRVVADHIRTLTFAIADGASPSNEGRGYVLRRVLRRAVRYGQQVLGGKPGFFHQLVPTIVETMKDGFPDIVNRADFVMSIIKDEEFAFNKTLGKGVAHFEKVVNEL 477
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A7S1IJB5_9EUGL (Alanine--tRNA ligase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IJB5_9EUGL) HSP 1 Score: 202 bits (514), Expect = 2.490e-58 Identity = 97/149 (65.10%), Postives = 116/149 (77.85%), Query Frame = 1 Query: 7 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGL 453 QGK SNYDTD+F P+F AI+ TGAR+YTGK+G +D DN+DM YRVVADHIRTL+ AI DG PSN+GRGYVLRR+LRRAVRYG QVLGG+PGFFH LVP VV +K FP+L ++ VM V++DEE FNRTL KG+ F K+ L Sbjct: 473 QGKMSNYDTDVFTPLFAAIQRATGARAYTGKLGVDDADNIDMGYRVVADHIRTLTFAIADGAVPSNEGRGYVLRRVLRRAVRYGQQVLGGQPGFFHQLVPDVVDLMKVGFPDLEARQEFVMSVIKDEEEAFNRTLGKGVSHFEKVVSEL 621
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: D0UKM7_9ARAC (Alanine--tRNA ligase (Fragment) n=1 Tax=Stenochrus portoricensis TaxID=61974 RepID=D0UKM7_9ARAC) HSP 1 Score: 187 bits (476), Expect = 2.450e-57 Identity = 92/155 (59.35%), Postives = 118/155 (76.13%), Query Frame = 1 Query: 1 VPQGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGLGEVK 465 V Q +SNYDTD+FVPIF+AI+ TG +SY+GKVG+ED+D +DMAYRV+ADH+RTL+IA++DG RP N GRGYVLRRILRRAVRY + L GKPG F +LVPVVV L +IFPEL ++ VMD++ DEE F +TL +G + + LG+ K Sbjct: 71 VIQNHSSNYDTDLFVPIFDAIQKSTGVKSYSGKVGQEDIDGIDMAYRVLADHVRTLAIALSDGGRPDNTGRGYVLRRILRRAVRYTIEKLNGKPGVFASLVPVVVNLLGDIFPELKKDQQTVMDIINDEESQFLKTLSRGHRLLQRTINKLGDQK 225
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: W7TIB5_9STRA (Alanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIB5_9STRA) HSP 1 Score: 201 bits (512), Expect = 3.230e-57 Identity = 101/149 (67.79%), Postives = 118/149 (79.19%), Query Frame = 1 Query: 7 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGL 453 Q K SNYDTDIF+P+F+AI+ +TGA Y GK+GK D ++ DMAYRVVADHIRTL+ AI DG PSNDGRGYVLRRILRRAVRYG +VLG PGFF LV VVV +K+IFPEL + EKRV++VL DEE FNRTLD+G K F K+A L Sbjct: 273 QDKPSNYDTDIFMPLFDAIQELTGAPPYAGKLGKADPESRDMAYRVVADHIRTLTFAIADGAVPSNDGRGYVLRRILRRAVRYGAKVLGAAPGFFSKLVHVVVNQMKDIFPELEEKEKRVVEVLADEERAFNRTLDQGEKHFKKVADEL 421
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: D0UKM0_PHRMA (Alanine--tRNA ligase (Fragment) n=1 Tax=Phrynus marginemaculatus TaxID=118542 RepID=D0UKM0_PHRMA) HSP 1 Score: 186 bits (472), Expect = 9.880e-57 Identity = 90/154 (58.44%), Postives = 115/154 (74.68%), Query Frame = 1 Query: 1 VPQGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGLGEV 462 V Q K+SNYDTD+FVPIF+AI+ TG R Y+GKVGKED D +DMAYRV+ADH RTL++A++DG RP N GRGYVLRRILRRA+RY + L GKPG F TLVP+VV L +IFPEL + V+D++ DEE F +TL +G K + +G++ Sbjct: 71 VIQNKSSNYDTDLFVPIFDAIQKATGTRPYSGKVGKEDEDGIDMAYRVLADHARTLTVALSDGGRPDNTGRGYVLRRILRRAIRYATEKLNGKPGMFATLVPIVVDLLGDIFPELKKDPQTVIDIITDEENQFLKTLTRGRKLLERTINKMGDL 224 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10012.22.1 >prot_H-paniculata_contig10012.22.1 ID=prot_H-paniculata_contig10012.22.1|Name=mRNA_H-paniculata_contig10012.22.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp VPQGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVAback to top mRNA from alignment at H-paniculata_contig10012:1562..3380+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10012.22.1 ID=mRNA_H-paniculata_contig10012.22.1|Name=mRNA_H-paniculata_contig10012.22.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1819bp|location=Sequence derived from alignment at H-paniculata_contig10012:1562..3380+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10012:1562..3380+ >mRNA_H-paniculata_contig10012.22.1 ID=mRNA_H-paniculata_contig10012.22.1|Name=mRNA_H-paniculata_contig10012.22.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=936bp|location=Sequence derived from alignment at H-paniculata_contig10012:1562..3380+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |