mRNA_H-paniculata_contig1001.19.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1001.19.1 vs. uniprot
Match: A0A6H5JRH3_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH3_9PHAE) HSP 1 Score: 484 bits (1247), Expect = 7.500e-160 Identity = 285/520 (54.81%), Postives = 340/520 (65.38%), Query Frame = 2
Query: 398 LSWAEVRDRIDVDERRRGLRSAHESAETGRATLESLEDQKERLERSEMVLDSTRYAIEQSARVLRGMNFWGKIVNAFTEDTKIPEP---YNRSSTATA--ANWAHD-DAPAEGFICPDCRRKFHTADGLVAHFESEHRGRSAASSAEFERH-ADGDPEFLGRGEGTDDTSSTTVGGSSVASGD---LRAQLFSGKDFRRGSPPSEIEVERESDGGGGSRVIAEQRAVMDAQDAYLDGVGRAVTELGFLGRNIGASIARQGDALERVVEKTEGSNDRAAFVTRKAARQAQRAKPKKPIFVMSVALQEVSTGLYMAVTGEDVILRGRELRNVCQFEVWQRQDGIFGFKSSVTGRWLGQTFLGYLRVTGTSFSKNYEWQADLKRKQTTMICCSANWGAGAYLSARPIAGGERTSITPTNANNSTSGTIHPVSASRGNSHTLPRDGVVVTTAELGLVDVTIANKCRAAVFRVIDCQGYAAQPYIGGRLIQIPPTEDGEAARRGG----RPGV-VGESDVGHGGW 1912
L WA+VRD IDV ERRRGLRSAHES E GR LE L+DQKERLERSEMVLDSTRYAIE+SARVLRGM FWGKI NAF+ D ++P+ R+ TAT N +D D PAEGFICPDCR F T+D LVAH H SA + A G G D S + GG G L+ QLF G++ G E + G VIAEQ+AVM +QDAYLD VG+AV ELG LGRNIG S+ QG L+RV EK+ +NDR AFVTRKAARQAQ +KP P FVMS+ALQEV+TGLY+AVTGE+V+L+GRELRNVC+FE W+RQ GI G KSSVT +WLGQTFLGYLRV+G+SF KN+EWQADL+ K+TTM+CCSANWGAG YLS+RP R T T+ +A+ G S T AEL LVD T+AN+ RAAVFR+++C GY QP++GG+L++ P G + GG RP + G GGW
Sbjct: 78 LLWAQVRDSIDVTERRRGLRSAHESVEVGREALERLDDQKERLERSEMVLDSTRYAIERSARVLRGMTFWGKIRNAFSNDPEVPQQPAGNTRAGTATGNGGNGNYDPDVPAEGFICPDCRGLFPTSDALVAHHGLAHTIASADDDEDARGWGAGGGATQYGXXXXXXDVSGGSHGGPIPEPGSSTSLKDQLFGGREGWSGQRAGGAERKXXXXG-----VIAEQKAVMASQDAYLDSVGQAVKELGLLGRNIGESLDGQGATLDRVAEKSSEANDRTAFVTRKAARQAQSSKPNNPTFVMSLALQEVTTGLYLAVTGEEVVLQGRELRNVCRFEAWERQHGIMGLKSSVTRKWLGQTFLGYLRVSGSSFGKNHEWQADLRGKETTMVCCSANWGAGGYLSSRPNGTSIRMGDT----------TLEGSTAASGGSKTNNGRDSAAEMAELSLVDATLANRPRAAVFRLVNCDGYTPQPFVGGKLMRNPEPPVGRGSGAGGQLPPRPSSGXXXXEGGEGGW 582
BLAST of mRNA_H-paniculata_contig1001.19.1 vs. uniprot
Match: D8LT98_ECTSI (Conserved C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT98_ECTSI) HSP 1 Score: 295 bits (756), Expect = 7.280e-88 Identity = 212/499 (42.48%), Postives = 260/499 (52.10%), Query Frame = 2
Query: 398 LSWAEVRDRIDVDERRRGLRSAHESAETGRATLESLEDQKERLERSEMVLDSTRYAIEQSARVLRGMNFWGKIVNAFTEDTKIPEP---YNRSSTATA--ANWAHD-DAPAEGFICPDCRRKFHTADGLVAHFESEHRGRSAASSAEFERHADGDPEFLGRGEGTDDTSSTTVGGSSVASGDLRAQLFSGKDFRRGSPPSEIEVERESDGGGGSRVIAEQR--AVMDAQDAYLDGVGRAVTELGFLGRNIGASIARQGDALERVVEKTEGSNDRAAFVTRKAARQAQRAKPKKPIFVMSVALQEVSTGLYMAVTGEDVILRGRELRNVCQFEVWQRQDGIFGFKSSVTGRWLGQTFLGYLRVTGTSFSKNYEWQADLKRKQTTMICCSANWGAGAYLSARPIAGGERTSITPTNANNSTSGTIHPVSASRGNSHTLPRDGVVVTTAELGLVDVTIANKCRAAVFRVIDCQGYAAQPYIGGRLIQIPPTEDGEAARRGGR 1870
L WA+VRD IDV ERRRGLRSA+ES E GR LE L+DQKERLERSEMVLDSTRYAIE+SAR+LRGM FWGKI NAF++D ++P+ R+ TAT N D D PAEGFICPDCR F T+D LVAH+ S H A+G GR G GG G + Q + G+ R G G GG V+ +R V DAQ GR GA + Q L G + R+ A Q L + GE L G + GI G KS VT +WLGQTFLGYLRV+G+SF KN+EWQADL+RK+TTM+CCSANWGAG YLS RP T+ N + P +AS GN++ RD AEL LVD T+AN+ RAAVFR+++C GY QP++GG+L++ P G + GG+
Sbjct: 78 LLWAQVRDSIDVTERRRGLRSAYESVEVGREALERLDDQKERLERSEMVLDSTRYAIERSARILRGMTFWGKIRNAFSDDPQVPQQPAGSTRAGTATGDGGNGNDDPDTPAEGFICPDCRGLFPTSDVLVAHYGSAHTI------------AEGGDGVAGRLPGF-----RRAGGEGA--GHPKPQHW-GEPGRAGGHA----------GPGGGEVVGGERPHGVRDAQ-----------------GRASGAELEAQEPDLCHEPGAAGGVDGPVPCGHRRGG---------------GAAGQGAEERLPLRGVGETGTLGGSSSTH-----------GIIGLKSGVTRKWLGQTFLGYLRVSGSSFGKNHEWQADLRRKETTMVCCSANWGAGGYLSVRPSG---------TSIRNGDTTLEGPTAASGGNTNNCGRDSAA-EMAELSLVDATLANRPRAAVFRLVNCDGYTPQPFVGGKLMRNPEPPVGGGSGAGGQ 493
BLAST of mRNA_H-paniculata_contig1001.19.1 vs. uniprot
Match: A0A835YH57_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH57_9STRA) HSP 1 Score: 167 bits (423), Expect = 3.620e-41 Identity = 124/387 (32.04%), Postives = 187/387 (48.32%), Query Frame = 2
Query: 500 SLEDQKERLERSEMVLDSTRYAIEQSARVLRGMNFWGKIVNAFTEDTKIPEPYNRSSTATAANWAHDDAPAEGFICPDCRRKFHTADGLVAHFESEHRGRSAASSAEFERHADGDPEFLGRGEGTDDTSSTTVGGSSVASGDLRAQLFSGKDFRRGSPPSEIEVERESDGGGGSRVIAEQRAVMDAQDA--------------------------YLDGVGRAVT-ELGFLGRNIGASIARQGDALERVVEKTEGSNDRAAFVTRKAARQAQRAKPKKPIFVMSVALQEVSTGLYMAVTGEDVILRGRELRNVCQFEVWQRQDGIFGFKSSVTGRWLGQTFLGYLRVTGTSFSKNYEWQADLKR-----KQTTMICCSANWGAGAYL 1564
SL E L+RS MV+DST+Y +++SARV+RGM WG++ N F+++ P P +ST + N A EG+ICP+CR + +AD L+AHF S H + AE E E R E + G + +G D RR S GG GS + EQR +M +Q A Y+D + V +L + +++G S+A Q L+ + + + ++DRA VTR+AA+ + KP +VAL ++G Y+A G +V L+ R++RNVC +E GI GFKS V+G WLG LG ++ + +F +WQ D + +ICC+ WG G+Y+
Sbjct: 47 SLNVNAESLQRSAMVVDSTQYLLDKSARVIRGMTMWGRMQNFFSDE---PAPVLAASTPIS-NSTSSSAGMEGYICPECRMRCASADDLLAHFASLHEALHGNAHAE-EPATISSREGAARNELFGEADKGRPGQGAWEQRSSTGCSANGADNRRNS------------GGSGSGLAQEQRNIMRSQQAMFVTSITLILTSAIAFICGGPPPEQAYIDTLSSTVLPQLQHVTQSLGTSLAEQEHTLDYLHDGADKASDRALAVTRQAAKMTR----LKPTASGTVALLHCTSGAYLAAVGSEVTLKQRQIRNVCLWERHSTSGGICGFKSGVSGLWLGVGMLGGIQCSAATFKSWEQWQCDALAPGDPDESVRLICCAGGWGKGSYV 412
BLAST of mRNA_H-paniculata_contig1001.19.1 vs. uniprot
Match: A0A7S1B3T1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3T1_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.400e-22 Identity = 62/182 (34.07%), Postives = 102/182 (56.04%), Query Frame = 2
Query: 1043 AVMDAQDAYLDGVGRAVTELGFLGRNIGASIARQGDALERVVEKTEGSNDRAAFVTRKAARQAQR--AKPKKPIFVMSVALQEVSTGLYMAVTGEDVILRGRE---LRNVCQFEVWQRQDGIFGFKSSVTGRWLGQTFLGYLRVTGTSFSKNYEWQADLK-RKQTTMICCSANWGAGAYLSA 1570
++ + Q+ +LD + A EL +G + ++++ Q +A+ R+ TE ND V+R+A R AQ +K +K F M V ++++ T L + + V+L L N+ + +W+RQ G ++ +TGRW+GQ FLG +R T F K EW+ + K T +ICCSANW +G Y+ A
Sbjct: 162 SIYERQENHLDAMSAAAAELSGIGMAMSSALSEQVEAIARIESNTETLNDDIRTVSRRAGRIAQSKWSKREKAAFKMYVNIRQIETQLLLGSMNDVVVLSASSPLALANI--WGLWERQGNAIGLRNELTGRWIGQGFLGDIRCTAMEFGKWEEWEMNEKCMSSTRLICCSANWNSGGYIHA 341
BLAST of mRNA_H-paniculata_contig1001.19.1 vs. uniprot
Match: A0A7S4INM8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4INM8_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.160e-21 Identity = 107/408 (26.23%), Postives = 184/408 (45.10%), Query Frame = 2
Query: 455 RSAHESAETGRATLESLEDQKERLERSEMVLDSTRYAIEQSARVLRGMNFWGKIVNAFTEDTKIPEPYNRSSTATAANWAH--DDAPAEGFICPDCRRKFHTADGLVAHFESEH---------RGRSAASSAEFERHADGDP------EFLGRGEGTDD---------------TSSTTVGGSSVASGDLRAQLFSGKDFRRGSPPSEIEVERESDGGGGSRVIAEQRAVMDAQDAYLDGVGRAVTELGFLGRNIGASIARQGDALERVVEKTEGSNDRAAFVTRKAARQAQRAKPKKPI--FVMSVALQEVSTGLYMAVTGEDVI---LRGRELRNVCQFEVWQRQDGIFGFKSSVTGRWLGQTFLGYLRVTGTSFSKNYEWQADLKRKQTT-MICCSANWGAGAYL 1564
R+A E+ E GRAT S+ Q E+L R E + D +Y I+++AR+LRG + G + N FT +PE +R T + N D + D +F +A +VA + R + AA A + D E G G D ++ + G ++A G + S + + +E+ S G S ++ + A+ QD +L + + EL +GR++ + + L+ + +K++ D+ + RKA R +RAK +K F + L+ + TGL++ + LR + R +E+W RQ + G K+ + RWLGQ+ +GY+ + ++F ++ EW+ D Q ++C ANWGAG +L
Sbjct: 54 RAASEAIEIGRATAASVAAQGEQLSRVEDMADEQKYMIDRAARILRGRTWGGWVANMFTS---VPERPDRDGTESGNNQVVGVDGGCGADYEYIDVPPQFESAAQVVADYRRHALLFLPACSTRDQKAACRAACDGLRDKARRELRALELAGANSGGQDEEGWGWYNVLSRDKESADEELRGINLAVGAKKESFSSNRAASAAPAGASALLEQSSLPTGYSDELSRKAAM---QDDHLSALSSDLNELQNIGRSLHETFNGHNEMLDTLADKSDNLEDQTKRIRRKADRLTERAKLRKTPAQFKELITLRNIETGLHLGCYDDGSSAPKLRSYDER-ASVWELWTRQGDVVGLKNRQSRRWLGQSMVGYVVCSASTFGRSEEWEFDDGDHQAKRLLCAGANWGAGGWL 454
BLAST of mRNA_H-paniculata_contig1001.19.1 vs. uniprot
Match: A0A7S2U9U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9U1_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.410e-20 Identity = 61/191 (31.94%), Postives = 98/191 (51.31%), Query Frame = 2
Query: 1019 SRVIAEQRAVMDAQDAYLDGVGRAVTELGFLGRNIGASIARQGDALERVVEKTEGSNDRAAFVTRKAARQAQRA--KPKKPIFVMSVALQEVSTGLYMAV--TGEDVILRGRELRNVCQFEVWQRQD-GIFGFKSSVTGRWLGQTFLGYLRVTGTSFSKNYEWQADLKRKQTTMICCSANWGAGAYLSARP 1576
S AE ++ Q+ +LD + + EL +L ++I + Q D L+ + K E D V R+A + AQ++ K KP VA++ + TG Y+ + T +DV++ G + F W R D FG +++ T WLGQ G + + TS+ + EW DL + ++C SANWG G ++S RP
Sbjct: 23 STDTAETLEKLEEQEKHLDSLSNNLNELQYLSQSISQAFDDQSDVLDELDGKAEALTDETRLVIRRADQLAQKSLFKRTKPKMENLVAIRHMQTGKYLVIDRTIKDVVV-GEFHPELSVFSFWSRSDCTTFGLQNTCTNTWLGQVLGGGIACSSTSYGRREEWDMDLGEDTSALLCASANWGNGGWISVRP 212
BLAST of mRNA_H-paniculata_contig1001.19.1 vs. uniprot
Match: W2KWG7_PHYPR (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2KWG7_PHYPR) HSP 1 Score: 89.0 bits (219), Expect = 3.050e-15 Identity = 95/379 (25.07%), Postives = 155/379 (40.90%), Query Frame = 2
Query: 452 LRSAHESAETGRATLESLEDQKERLERSEMVLDSTRYAIEQSARVLRGMNFWGKIVNAFTEDTKIPEPYNRSSTATA-ANWAHDDAPAEGFICPDCRRKFHTADGLVAHFESEHRGRSAASSAEFERHADGDPEFLGRGEGTDDTSSTTVGGSSVASGDLRAQLFSGKDFRRGSPPSEIEVERESDGGGGSRVIAEQRAVMDAQDAYLDGVGRAVTELGFLGRNIGASIARQGDALERVVEKTEGSNDRAAFVTRKAARQAQRAKPKK--PIFVMSVALQEVSTGLYMAVTGEDVILRGRELRNVCQFEVWQRQDG--IFGFKSSVTGRWLGQTFLGYLRVTGTSFSKNYEWQADLKRKQTTMICCSANWGAGAYLSAR 1573
LR ES + GRAT +L Q E+L RSE ++D T+ ++ S RVLRGM + G YN+ S A +N A GFICP+C+ KF +AD L H+ + H S+ + S + G +G L+ Q +R + ++ D D +L + + EL +G+++ + L+R+ K R +K QA + KK IF A QEV TG ++ + +L + + C F + D ++GF+S + +LG G L+V G F+ +YE + T + C S+ +G G +++ +
Sbjct: 21 LRDTAESLQLGRATAHTLSMQAEQLGRSEGMVDETQATVDMSKRVLRGMTWSGWF-------------YNKLSAAPQLSNSKEPHEIAMGFICPECKVKFQSADQLGMHYGNVHEPTSSK-----------------------ERSPLNLVGKRPDNGHLQQQ---------------------------NRAV---ESIEDIHDKFLRDLEPQLAELKLQSLALGSALDTHNEQLDRLDSKI----GRVHHDMKKVGIQANKIMGKKVPAIFRFRCAFQEVQTGKFLRDVDGEALLSADIVVDGCTFRAYTLGDDSDVWGFQSEKSSNFLGINRYGNLKVQGVDFN-SYEQFLVESKASTPIFCLSSYFGLGGWVAVK 328
BLAST of mRNA_H-paniculata_contig1001.19.1 vs. uniprot
Match: A0A484E5R8_BRELC (C2H2-type domain-containing protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5R8_BRELC) HSP 1 Score: 88.6 bits (218), Expect = 3.860e-15 Identity = 101/379 (26.65%), Postives = 161/379 (42.48%), Query Frame = 2
Query: 452 LRSAHESAETGRATLESLEDQKERLERSEMVLDSTRYAIEQSARVLRGMNFWGKIVNAFTEDTKIPEPYNRSSTATAANWAHD-DAPAEGFICPDCRRKFHTADGLVAHFESEHRGRSAASSAEFERHADGDPEFLGRGEGTDDTSSTTVGGSSVASGDLRAQLFSGKDFRRGSPPSEIEVERESDGGGGSRVIAEQRAVMDAQDAYLDGVGRAVTELGFLGRNIGASIARQGDALERVVEKTEGSNDRAAFVTRKAARQAQRAKPKKPIFVMSVALQEVSTGLYMAVTGEDVILRGRELRNVCQFEVWQRQDG--IFGFKSSVTGRWLGQTFLGYLRVTGTSFSKNYEWQADLKRKQTTMICCSANWGAGAYLSARPI 1579
LR ES + GRAT + L Q E+L RSE ++D T + ++RVLRGM + G I YN+ A + + D A GFICP+C+ KF +AD L AH+ H +S A +R +D R SS S+ + D+ A S P E++ +S A+ DA D + G+ R T++G + +ER K G A F R A ++A+ K F+ + V + + + DV++ G C F + D ++GF+ T R++G G L+V G F ++ + K TT+ C S+ +G G +++ + +
Sbjct: 19 LRETAESLQAGRATAQLLSMQAEQLGRSERIVDETHATVALASRVLRGMTWSGWI-------------YNKVLAAPQLSTCKELDEIAMGFICPECKIKFLSADQLEAHYTKTH-----SSFASIKRESD-------RLVAQQSRSSQETQQSTTHTRDIHATFLSDL------APQLAELKDQS------------LALSDALDLHHMGLDRLDTKVG--------QVHHDMKQVERQAHKIMGRTIPAVFRFRCAIQEAKMDK-----FLCTKNGDAVLSDVTKMASSADVVVDG------CTFRAYTLGDDSDVWGFQCEKTSRFVGINRYGNLKVQGVEFHSYEQFLVEAK-STTTIFCLSSYFGLGGWIAMKDL 334
BLAST of mRNA_H-paniculata_contig1001.19.1 vs. uniprot
Match: A0A1E7FWU9_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWU9_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.530e-14 Identity = 101/451 (22.39%), Postives = 182/451 (40.35%), Query Frame = 2
Query: 434 DERRRGLRSAHESAETGRATLESLEDQKERLERSEMVLDSTRYAIEQSARVLRGMNFWGKIVNAFTEDTKIPEPYNRSSTATAANWAHDDAPAEGFICPDCRR-------KFHTADGLVAHFESEHRGRSAA-----SSAEFERHADGDPEFLGRG-EGTDDTSSTTVGGSSVASGDLRAQLFSGKDFRRGSPPSEIEVERESDGGGGSRVIAEQRAVMDA-------------------------------QDAYLDGVGRAVTELGFLGRNIGASIARQGDALERVVEKTEGSNDRAAFVTRKAARQAQR-------AKPKKPIFVMSVALQEVSTGLYMAVTGED---VILRGRELRNVCQFEVWQRQDGIFGFKSSVTGRWLGQTFLGYLRVTGTSFSKNYEWQADLKRKQTTMICCSANWGAGAYL-------SARPIAGGERTSI 1603
+E +R ++A E+ GR TLE+ Q E+L+ +E + D T Y ++++ R+LRGM + G I+N + D PE + + T N P PD + +H ++ E+ + + + + +G+ + +D+ + + DL QL R V+R G + A ++ D QD +LD + + + ELG L N+ S+ +Q + V++ + ND F T+ R+ +R KP+ FV ++ +G Y++V + ++ C F +W+R + + G ++ RW GQ+ LG L + ++F++ EW+ D TT++ SA WG+G YL +P+ GG SI
Sbjct: 30 EEYQRAQQAAVEAVMVGRETLEATIGQGEQLQNAENMADDTEYTLDKANRMLRGMTWSGFILNKLSRDVDPPEYKDDTINDTKNNKGTLGPPKVYEQVPDLYKAAAQALQNYHANLQVLEDCETNEQKETCRLICDDMHRQVNKKITEASTMIGQQRKDNNDSVNDNACKDTTNDEDLALQLQEDVSALRQRQLVLQHVQRGLMMTSGEKTDASASSINDKVKLFKNVKHNDTTVNGSSDSNTTSNDTVLIQQDQHLDTINQQLQELGSLAGNLNISLQQQSE----VIDSLDSKNDTLHFKTKTVNRRTERFIQDKSWTKPRAE-FVRYAWIRHQISGQYLSVAPNNDSTTLVLSNVFNERCIFGIWKR-NRVLGLQNKYNRRWAGQSLLGKLTCSASTFNRREEWEVDNDWSDTTLLIVSAGWGSGGYLLLDKEGKGTQPLIGGGDISI 474
BLAST of mRNA_H-paniculata_contig1001.19.1 vs. uniprot
Match: A0A329SZB2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZB2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 4.350e-14 Identity = 102/401 (25.44%), Postives = 165/401 (41.15%), Query Frame = 2
Query: 452 LRSAHESAETGRATLESLEDQKERLERSEMVLDSTRYAIEQSARVLRGMNFWGKIVNAFTEDTKIPEPYNRSSTATAANWAHDDAPAEGFICPDCRRKFHTADGLVAHFESEHRGRSAASSAEFERHADGDPEFLGRGEGTDDTSSTTVGGSSVASGDLRAQLFSGKDFRRGSPPSEIEVERESDGGGGSRVIAEQRAVMDAQDAYLDGVGRAVTELGFLGRNIGASIARQGDALERVVEKTEGSNDRAAFVTRKAARQAQRAKPKKPIFVMSVALQEVSTGLYM------AVTGEDVILRGRELRNVCQFEVWQRQDG--IFGFKSSVTGRWLGQTFLGYLRVTGTSFSKNYEWQADLKRKQTTMICCSANWGAGAYLSAR-PIAGGERTSITPTNANNS 1627
LR ES + GRAT +L Q E+L RSE ++D T+ ++ S RVLRGM + G + N S+ +N A GFICP+C+ KF +AD L H+ + H S P L + P+ +++++S +AE ++ D D +L + + EL +G+++ Q + L R+ K + V +A + A R P +F A QEV TG ++ A G DV++ G C F + D ++GF+S + +LG G L+V G F+ +YE + T + C S+ +G G +++ + P+ + T I T N S
Sbjct: 21 LRDTAESLQMGRATAHTLSMQAEQLGRSEGMVDETQATVDTSKRVLRGMTWSGWVYNKL------------SAVPQLSNSKEPHEIAMGFICPECKVKFQSADQLGMHYGNVHERLSNKEEQP--------PNLLEK------------------------------------RPNNGQIKQQS-------RVAE--SIGDIHDKFLRDLEPQLAELKEQSLALGSALDTQNEQLGRLDTKIGRVHHDMKQVGIQATKMAGRKVPV--VFRFRCAFQEVQTGKFLRDVDGEAQLGADVVVDG------CTFRAYTLGDDSDVWGFQSEKSSNFLGINRYGNLKVQGADFN-SYEQFLVESKASTPIFCLSSYFGLGGWVAMKEPVNSNKLTIIRGTPENRS 347 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1001.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1001.19.1 >prot_H-paniculata_contig1001.19.1 ID=prot_H-paniculata_contig1001.19.1|Name=mRNA_H-paniculata_contig1001.19.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=589bp MQHQQEQNEAQQHERDALFGPQLRRNFSPPRTNPHRGRSRYNTPIEYPSSback to top mRNA from alignment at H-paniculata_contig1001:5769..14223- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1001.19.1 ID=mRNA_H-paniculata_contig1001.19.1|Name=mRNA_H-paniculata_contig1001.19.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8455bp|location=Sequence derived from alignment at H-paniculata_contig1001:5769..14223- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1001:5769..14223- >mRNA_H-paniculata_contig1001.19.1 ID=mRNA_H-paniculata_contig1001.19.1|Name=mRNA_H-paniculata_contig1001.19.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3534bp|location=Sequence derived from alignment at H-paniculata_contig1001:5769..14223- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |