mRNA_H-paniculata_contig1000.14.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1000.14.1 vs. uniprot
Match: D7G1N7_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N7_ECTSI) HSP 1 Score: 614 bits (1583), Expect = 3.690e-183 Identity = 445/1162 (38.30%), Postives = 564/1162 (48.54%), Query Frame = 2 Query: 2909 SFCRSVGYPLQREEAAAIFKRYYDGDGFCGWHSFLQMYHDENGGNDACARHGNLLCAVCVRSKQLGFKMCECGHPFDIHRLLVGAAAPT-GRALR----RGKVIREKKFNALLAGNFTTFSTDRPINVQGCTVAST-------------SVVLKREVEN--QIYARPGAHKV--HACHNRQRKTRTQRQKAQHLRSPQGRPAFDSFRESLCLP---SSTDHPPSSPSSVGHNSSKDSPTASPSRGNRVTYA-PILG-PEDSHELPLSPVGGQTTMTM-PLNHLPTLQEAKRKEELVRDMSWAGRRGQAARAALAEMNSVSQGKNAAEYAVKLKADLAANEARFDGQSSLAAVQTKKEFQRGFLISEAVSFVKGGVLKATMNAVGMYLYLLRALSDEQHELLEDNQIFTAFVARHVVFFERHWFKLIKDIRNGHVDPHLPISDERRARVQTLMIPNKKRAQRLDDALRVLGFHARASGNFSTFNT---------------------TSNNL-------------------SEVDQEESMAKRMNASRKR---PCAVNVNGVTVAGGRRHRRTVGGGEMESEARQARSRLRGRPRSPSVGAVHKIPTAEEASEVAYKLITKASIAPAGVVQASSGRRIRKHVCTHPGCGKVFHLRMSAAAHQ-KEHQFQRGLATKTPLIDQFLSTVWPSHGVLWS----------------------------------AKSTAAPGQHKSKTVNHDEAFIHARFTCRVPKCGRRFESSKLLGLHLRVGHCAFDLEKMKQSEWWASKGGGGGVGTMEGSSLAVTLDGLSITNWIDVGGGLGARFVGRYRLVPPFMPPSGCPIIEACAQHCWLKKGCRRCQEVEERAKPALPGLAMAEQGSTVQEETAVKEVAGVAKSAFGFPVPPAKFYARARVKVSHHGRPVELDLDSAEVLRCAILVMPLAS-------------------------------TPIP-----------VSSNFTATKANKQSDRIETREVQQGKREEASFAADFSSKFAEGGITRGEHICGDPFVNFDVTLEHVSRVGG-GRGGSGTTRSQEFSSSVEGDESALVTSQGGNGVIQRHEVPVQIVAVLVDGAGKGWLAARRLWSPKEVGMEPLVLAGLTLQDLDLNQEASIHT 5947 SF R GYPLQ+EEAA I KRY+DGDGFC WHSFL YH+ + ACARHG LLC +C+R+KQLGFKMCECGH FD H L+VG + P G +R RG+V+ +K+ +ALL+ + DRPINV+GC+ AS + ++ + N ++ G K HA + + + R +RQK GR S E P ++ SP G +S D S + T + G P+++ ++ G T+ + ++P+ QEA+ +E+ RD S AGRRGQA RAALAEMNS QGKNAA+YA KL+ D+A N +R DG+ LA V +KKE RH VF ERHW KLIKDIRNG DPHLPIS+ R RV+ LMIPNKKRAQRLDD LR LGFHARASG + T + +S N ++ +++ESMAK + A RKR G RR RRTV GGEMES R +SR R RSPS GA +PT E+AS+ AY L+T AS AGVVQA SGR RKHVC HPGCGKVFHL+ SA HQ KEH+F+ LA TPL DQF+ WPS GV WS AK+ A G ++ +A +HARF C VP C RF ++LLGLHLR+GH FDLEKMK +G+ TLDG+++T IDVGG + A F+G YRLVPPF P+GCP I AC H K GC+RC ++ A Q + V + + G + G+P+PPAKFY RA V V+HHGRP+ LDLD AE LRC +L PL S + +P S N TA+ + D + + + + + S A G + C D N DV +H GG G G S VP ++VAVLVDG+GKGW+AARRLWS +VG L AGLT D+D QE + T Sbjct: 708 SFLREAGYPLQKEEAALIVKRYFDGDGFCAWHSFLNSYHNAGSKSSACARHGRLLCTLCIRTKQLGFKMCECGHVFDAHELVVGGSGPAKGETVRKQDQRGRVVPQKQLSALLSKGLSKTVVDRPINVEGCSAASNLRRAQYTNNSPSQAALISAQRPNGFRVTGARGGTKTPPHATTSSRARRRWRRQKP-------GR-GSRSITEEASQPGGITALSLAELSPPFFGRRTSADGADGSGAAALSPTATGDVAGFPKENLDMVRPANQGATSPNKRKITYIPSFQEARSQEKERRDASCAGRRGQAERAALAEMNSAVQGKNAADYAAKLQDDIATNTSRVDGRLCLAPVMSKKEL------------------------------------------------------RHAVFLERHWCKLIKDIRNGATDPHLPISEAERMRVEGLMIPNKKRAQRLDDRLRALGFHARASGIYKTAASASATGTXXXGSATAKRRAPGQSSRNXXXXXXXXXXXXXXXGSRPHTQEEKQESMAKMVEACRKRRPGTAESEAGGTPEQSVRRKRRTVTGGEMESAVRLLKSRGESRARSPSTGAWQAVPTVEQASKTAYGLLTAASANAAGVVQAPSGRGFRKHVCLHPGCGKVFHLKASADRHQEKEHRFRMRLAAPTPLTDQFMLPSWPSDGVPWSSGLPAPGRGKKHTSVSKGTVTACRGPAGRTPTKTAKTVGAGGSAGDTVLDRGDASLHARFACGVPGCSHRFPEARLLGLHLRMGHNEFDLEKMKARR--------------DGTVPTQTLDGVTVTAAIDVGGHVRASFLGAYRLVPPFQSPTGCPDIPACGLHGRPKHGCQRCADI-------------ARQSAAVGADDGGEPEDG--RPPMGWPLPPAKFYTRAMVVVNHHGRPINLDLDCAEELRCPLLRFPLRSCNPSTGPSVEHRRADNATDDKAGGDALPDVDSVLPGFGDGLQGGQEASRNLTASSGGSRKDLTDDGQGASAPKNDTDGGS--GSFPARSGPSIDA--CIDDNGNDDVLPQHFLTGGGIDPAGLGENNSHHQHEPQXXXXXXXXXXXXXXXXXHGALVPARLVAVLVDGSGKGWMAARRLWSVPDVGHHALAEAGLTAGDVDREQEFFVAT 1774
BLAST of mRNA_H-paniculata_contig1000.14.1 vs. uniprot
Match: A0A6H5JIC6_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC6_9PHAE) HSP 1 Score: 337 bits (864), Expect = 2.300e-96 Identity = 257/701 (36.66%), Postives = 319/701 (45.51%), Query Frame = 2 Query: 4178 MIPNKKRAQRLDDALRVLGFHARASGNFSTF------NTTSNN----------------------------------LSEVDQEESMAKRMNASRKRPCAVNVNGVTVAGGRRHRRTVGGGEMESEARQA-RSRLRGRPRSPSVGAVHKIPTAEEASEVAYKLITKASIAPAGVVQASSGRRIRKHVCTHPGCGKVFHLRMSAAAHQ-KEHQFQRGLATKTPLIDQFLSTVWPSHGVLWS----------------------------------AKSTAAPGQHKSKTVNHDEAFIHARFTCRVPKCGRRFESSKLLGLHLRVGHCAFDLEKMKQSEWWASKGGGGGVGTMEGSSLAVTLDGLSITNWIDVGGGLGARFVGRYRLVPPFMPPSGCPIIEACAQHCWLKKGCRRCQEVEERAKPALPGLAMAEQGSTVQEETAVKEVAGVAKSAFGFPVPPAKFYARARVKVSHHGRPVELDLDSAEVLRCAILVMPLASTPIPVSSNFTATKANKQSDRIETREV-----------------QQGKREEASFAADFSSKF----------------AEGG---ITRGEHICGDPFVNFDVTLEHVSRVGGGRGGSGTTRSQEFSSSVEGDESALVTSQGGNGVIQRHE--VPVQIVAVLVDGAGKGWLAARRLWSPKEVGMEPLVLAGLTLQDLDLNQEAS 5938 MIPNKKRAQRLDD LR LGFHARASG + T TT + LS+ +++ESMAK + A RKR G ESEA R R RSPS GA +PTAE+AS+ AY L+T AS AGV+QA SGR RKHVC HPGCGKVFHL+ SA HQ KEH+F+R LA TPL DQF+ WPS GV W+ AK+ A G ++ +A +HARF C VP C RF ++LLGLHLR+GH FDLEKMK +G+ TLDG+++T IDV + A F+G YRLVPPF P+GCP I AC H K GC+RC+++ A Q + V + + G + G+P+PPAKFY RA V V+HHGR + LDLD E LRC +L PL S +AN +D R+ QG + ++ S K EGG G I N DV H+ GGG G +Q + H VP ++VAVLVDG+GKGW+AARRLWS +VG L AGL D+D QE + Sbjct: 1 MIPNKKRAQRLDDLLRALGFHARASGIYKTAVSACATGTTGSGSATAKRCTPGPSSRNGGRXXXXXXXXXXXXXXXXLSQEEKQESMAKMVEACRKRRP---------------------GTAESEAGGTPEQRGESRARSPSTGAWQAVPTAEQASKTAYGLLTAASANAAGVIQAPSGRGFRKHVCLHPGCGKVFHLKASADRHQEKEHRFRRRLAAPTPLTDQFMLPSWPSDGVPWASGLPAPGRGTKHTSVSKGTVTVRRGPAGSTPTKTAKTVGAGGSAGDTVLDRGDASLHARFACGVPGCSHRFPQARLLGLHLRMGHNEFDLEKMKARR--------------DGTVPTQTLDGVTVTAAIDVDSHVRASFLGAYRLVPPFQSPTGCPDIPACGLHGRTKHGCQRCEDI-------------ARQSAAVGADDGGEPEDG--RPPMGWPLPPAKFYTRAMVVVNHHGRRINLDLDCVEELRCPLLRFPLRSCDPSTGPTVKHRRANHATDDKAGRDPLPDVDSVHPGFGDGLQEDQGALRNLTVSSGGSRKDLTDDGQGASAPKNDNDVEGGSFPARSGPSIDACIDDNDDVLPRHLL-TGGGIDSEGLGENQPHHQHEPQHQQNTHXXXXXXXXXXXHGALVPARLVAVLVDGSGKGWMAARRLWSVHDVGHHALAEAGLMAGDVDREQEVA 650
BLAST of mRNA_H-paniculata_contig1000.14.1 vs. uniprot
Match: A0A6H5JL35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL35_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.760e-40 Identity = 77/134 (57.46%), Postives = 97/134 (72.39%), Query Frame = 2 Query: 2909 SFCRSVGYPLQREEAAAIFKRYYDGDGFCGWHSFLQMYHDENGGNDACARHGNLLCAVCVRSKQLGFKMCECGHPFDIHRLLVGAAAPT-GRALR----RGKVIREKKFNALLAGNFTTFSTDRPINVQGCTVA 3295 SF R VGYPLQ+EEAA I KRY+DGDGFC WHSFL YH+ + AC+RHG LLC +C+R+KQLGFKMCECGH FD H L+VG + P G +R RG+V+ +K+ +ALL+ + DRPINV+GC+ A Sbjct: 246 SFLREVGYPLQKEEAALIVKRYFDGDGFCAWHSFLNSYHNAGSKSSACSRHGRLLCTLCIRTKQLGFKMCECGHVFDAHELVVGGSGPVKGETVRKQDQRGRVVPQKQLSALLSKGLSKTVVDRPINVEGCSAA 379
BLAST of mRNA_H-paniculata_contig1000.14.1 vs. uniprot
Match: A0A2R5GL35_9STRA (Abnormal spindle-like microcephaly-associated protein-like (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GL35_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.340e-21 Identity = 127/479 (26.51%), Postives = 193/479 (40.29%), Query Frame = 2 Query: 3893 EFQRGFLISEAVSFVKGGVLKATMNAVGMYLYLLRALSDEQHELLEDNQIFTAFVARHVVFFERHWFKLIKDIRNGHVDPHLPISDERRARVQTLMIPNKKRAQRLDDALRVLGFHARASGNFSTFNTTSNNLSEVDQEESMAKRMNASRKRPCAVNVNGVTVAGGRRHRRTV--------GGGEMESEARQA-----RSRLRGRPRSPSVGAVHKIPTAEEAS---EVAYKLITKASIAPA---GVVQASSGRRIRKHVCTHPGCGKVFHLRMSAAAH-QKEHQFQRGLATKTPLIDQFLSTVWP---------SHGVLWSAKSTAAPGQH---KSKTVNHDEAFIHARFTCRVPKCGRRFESSKLLGLHLRVGHCAFDLEKMKQSEWWASKGGGGGVGTMEGSSLAVTLDGLSITNWIDVGGGLGARFVGRYRLVPPFMPPSGCPIIEACAQHCWL--KKGCRRCQEVEERAKPALP 5227 +F RGF +++ V + L+ +Y+ +L ALS LLED F A+V + F +RHW KL+ DIR G ++ LP+S RA+V++ + + RA+ LD AL LGF+ SG + ++++ V R+ A V G AG R+ R +V ES R ++++ P + S+ + +P E + +A K + AP +V + R IRK+ CT PGCG+ F A AH Q+EH + LA +D L WP S GVL + + + + K + E + F C C RF + K L H + H + K E + +WID+ G L VPP P+G + C++H W + C C EV R P P Sbjct: 1054 DFARGFHVADPVPLIVNDNLRMETKTAPLYVDMLLALSSRSCGLLEDWPAFVAYVFQSFAFIDRHWRKLVYDIRTGTLNKLLPVSARMRAQVESQLEADPARAEMLDAALEQLGFYKSNSGPSGVPSGVPSSIAGVXXXXXXXXXXXKRRRAVTAGGVEGE-AAGTRKRRASVTLPLTVTPDRSTPESLLRSGNVDAFKAKIESDPHTQSLE-LDTLPEKERKALVEAIAVKDVYDLKRAPRMRPSLVHKHNERDIRKYSCTFPGCGQAFMTDRDAEAHVQQEHVGKFRLANGEHAVDHRLHAYWPRVAPWIPKSSKGVLQARAAAGIKALNDAGEEKRLADQEVRAYYPFCCSRQGCSERFHTKKELHAHEQTVHARPEQLKALVGE-------------------------VPARSWIDLQGSLFH--------VPPSALPAGIR-LPCCSKH-WAMAQPRCEECVEVIARGVPVSP 1495
BLAST of mRNA_H-paniculata_contig1000.14.1 vs. uniprot
Match: A0A6S8CU03_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8CU03_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.050e-19 Identity = 113/404 (27.97%), Postives = 166/404 (41.09%), Query Frame = 2 Query: 3881 QTKKEFQRGFLISEAVSFVKGGVLKATMNAVGMYLYLLRALSDEQ---HELLEDNQIFTAFVARHVVFFERHWFKLIKDIRNGHVDPHLPISDERRARVQTLMIPNKKRAQRLDDALRVLGFHARASGNFSTF----NTTSNNLS--EVDQEESMAKRMNASRKRPCAVNVNGVTVAGGRRHRRTVGG------GEMESEARQA---RSRLRGRPRSPS---------------------VGAVHKIPTAEEASE------VAYKLITKASIAPAGVVQASSGRRIRKHVCTHPGCGKVFHLRMSAAAH-QKEHQFQRGLATKTPLIDQFLSTVWPSHGVLWSAKSTAAPGQHKSKTVNHDEAFIHARFTCRVPKCGRRFESSKL--LGLHLRVGHCAFDLEKM 4948 QTK E +RGF+IS V V L+ T +YL L+ L DE+ L+ + F + V H VF ERHW K+++DIR+G ++ H+PIS R Q M P +A R+D L LGFHAR+SG + N LS + D+E + S + + G+ ++++R V + ES A Q R + PRSP+ V + + T + ++ ++Y + T P + RR + VC PGCG+ F R + H Q H R LA TP DQ+ WP+ V W +K N FT P C +F+ L HL H + L+ + Sbjct: 694 QTKIELERGFIISRPVPIVSEDELRLTTRVGDLYLKLIEELGDERMFSSRHLDQDPRFVSLVFEHDVFLERHWKKIVRDIRSGRLNRHVPISGGDRRAHQAKMYPKPNQASRIDKGLHALGFHARSSGVHGQLAAKVSGAENTLSPDDTDKEAHTDDYLKPSMNQKTEEDTTGIKR---QKNKRRVSFFQESSINQSESNAFQVSSPRDNMIEIPRSPASSIRSKDDSMHPKLLKRNMSPVSSSGRRSTTSDINDTLDVHRMSYHMKTLPRATPEEAIVQE--RRTLRFVCPQPGCGQCFSSRDTCFKHFQAIHSESRRLAIATPDQDQYFRNYWPAK-VPWQ--------DELAKRTNF--------FTLNCPICSTKFKCRTRHDLRAHLITAHPSSQLKDL 1075
BLAST of mRNA_H-paniculata_contig1000.14.1 vs. uniprot
Match: A0A835ZC38_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC38_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.160e-18 Identity = 93/305 (30.49%), Postives = 144/305 (47.21%), Query Frame = 2 Query: 3860 QSSLAAVQTKKEFQRGFLISEAVSFVKG--GVLKATMNAVGMYLYLLRAL-SDEQHELLEDNQIFTAFVARHVVFFERHWFKLIKDIRNGHVDPHLPISDERRARVQTLMIPNKKRAQRLDDALRVLGFHARASGNFSTFNTTSNNLSEVDQEESMAKRMNASRKRPCAVNV-NGVTVAGGRRHRRTVGGGEMESEARQARSRLRGRPRSPSVGAVHKIPTA-EEASEVAYKLITKASIAPAGVVQASSGRRIRKHVCTHPGCGKVFHLRMSAAAHQKEHQFQRG---LATKTPLIDQFLSTVWP 4750 Q LA +Q+ +E + GF +S + V G G L+ NA +YL +R + S +LL F +V FFERHW K++KD++ G +D LPIS + R+ V+ M+P+ KRA +LD A R LGFH R G +S N S + + A V + + +T R +R G E+ A + P + G+V + + ++ E+ + + +A PA ++ GR++ K++C HP C HL +AA LAT PL+DQ+L WP Sbjct: 734 QGKLAPIQSPRELKAGFALSSPL-LVGGHEGELQVVTNAASLYLTAMRDIGSGCVPDLLARAGAFAEYVLHRAAFFERHWTKIVKDVQTGTLDAALPISTKLRSEVEAAMVPDIKRAAKLDAAFRQLGFHDRRGGLWSQGRRKHANTSSPSEPTTSA-----------IVGLPHDLTPIRSRGTKRR--GTELPGIANRG-------PETKRCGSVIQAALSIQQIQELGHTMRCEAVPGPAKYMRIE-GRKMGKYICQHPVC---VHLSTTAAXXXXXXXXXXXVTKLATGLPLVDQYLKLAWP 1013
BLAST of mRNA_H-paniculata_contig1000.14.1 vs. uniprot
Match: F0Y7Q9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7Q9_AURAN) HSP 1 Score: 103 bits (257), Expect = 3.890e-18 Identity = 61/163 (37.42%), Postives = 96/163 (58.90%), Query Frame = 2 Query: 3875 AVQTKKEFQRGFLISEAVSFVKGGVLKATMNAVGMYLYLLRALSDEQHELLE-DNQIFTAFVARHVVFFERHWFKLIKDIRNGHVDPHLPISDERRARVQTLMIPNKKRAQRLDDALRVLGFHARASGNF------STFNTTSNNLSEVDQEESMAKRMNASR 4342 A Q+K E +RGF I+ + + L+ T+ A +YL LL SDE+ + + ++Q F + + VF ERHW KL++D+R G ++ HLPIS ERRA +++ M P ++A ++D AL+ LGFH R+SG + +T +TT++ D + A R SR Sbjct: 1143 ATQSKVELERGFRITRPIPMIFDDELRLTVKAADVYLELLDRFSDEELVVRKHEDQAFVKLIFENDVFLERHWKKLLRDVRYGKINRHLPISPERRAALESRMYPKPQQANKIDAALKRLGFHVRSSGLYGSAALAATKSTTADAAPRDDDGGAPADRFGGSR 1305
BLAST of mRNA_H-paniculata_contig1000.14.1 vs. uniprot
Match: A0A7S3ZVQ2_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVQ2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.210e-12 Identity = 130/522 (24.90%), Postives = 195/522 (37.36%), Query Frame = 2 Query: 3878 VQTKKEFQRGFLISEAVSFVKGGVLKATMNAVGMYLYLLRALSDEQHELLEDNQI-FTAFVARHVVFFERHWFKLIKDIRNGHVDPHLPISDERRARVQTLMIPNKKRAQRLDDALRVLGFHARASGNFS----------TFNTTSNNLS-EVDQEESMA-------------------KRMNASRKRPC-------AVNVNGVTVAGGRRHRRTVGG------------GEMESEARQARSRLRGRPRS--PSVGAVHKIPTAEEA----------SEVAYKLITKASIAPAGVVQA----SSGRRIRKHVCTHPGCGKVFHLRMSAAAHQKEHQFQRGLATKTPLIDQFLSTVWPSHGVLWSAKSTAAPGQHKSKTVNHDEAFIHAR------------FTCRVPKCGRRFESSKLLGLHLRVGHCAFDLEKMKQSEWWASKGGGGGVGTMEGSSLAVTLDGLSITNWIDVGGGLGARFV-GRYRLVPPFMPPSGCPIIEACAQH------CWLKKGCRR 5188 +Q++ E ++GF ++ + + G L+ + + +YL LL E L E F + R+ VF ERHW K+++D+R G ++ HL +S ERR + + K A +L++A R LGFHAR++ + +T S N S DQ S A +R SR P V AG + R + +M +A S GR + PSVG ++I + S+V +KL + AP +Q RR+R +C HPGCG VF + +A H K R + L+ P + + V DE I R F C P C + + L HL+VGH +++K+ LA D + + G G G V G+ +L PPF PP P+ C +H CW GC R Sbjct: 1142 LQSQNELRKGFHLTRPIPMILDGELRISTDPTEVYLELLDRFGKEDLNLREHEDTGFVSLCFRNDVFLERHWKKILRDVRYGTLNRHLDLSKERRHELTQRLYAKPKHASQLEEAFRRLGFHARSAERSGASAKAIQDEPSVDTKSKNASMRWDQAISSALEDPSKARAAEKPVAEIPEERPQTSRSVPDDFKEEDRGATSRSVRFAGSLKSRDSRSRYSSLSSRDSSYYEDMSEPTSRASSSNMGRSGTTRPSVGVEYRILERRNSESDMRVDTPQSDV-HKLAHDIATAPRRQLQEFEPIRQDRRMRPWLCPHPGCGAVFSTKEAAVQHAKREHLGR----------RRLAVATPEQDQFF-------------RRVWPDEKMIWERGEIAKKDREKCLFQC--PICFQPCVTRDDLKRHLKVGHSKREVKKIYVE-----------------LKLAAKADAM------EAGKGKGLADVKGKAQLTPPFPPPKRAPLA-VCLKHKRERFRCW-DCGCAR 1612
BLAST of mRNA_H-paniculata_contig1000.14.1 vs. uniprot
Match: A0A7S3H7V8_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7V8_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.520e-7 Identity = 39/125 (31.20%), Postives = 60/125 (48.00%), Query Frame = 2 Query: 3881 QTKKEFQRGFLISEAVSFVKGGVLKATMNAVGMYLYLLRALSDEQHELLEDNQIFTAFVARHVVFFERHWFKLIKDIRNGHVDPHLPISDERRARVQTLMIPNKKRAQRLDDALRVLGFHARASG 4255 +T +++ F + V VK + + +Y L+ + ++ D+ F V H+ FERHW K++ DIR G +D L I+ E R + IP A+RLDD R LGFH + G Sbjct: 237 KTVRDYHEKFDHNMPVPVVKNDEIVYSFEGPQIYFNLVNQIIRMDEKVNFDDPEFLKLVVDHIQLFERHWRKMVADIRTGKLDRRLQINPESRLIFENANIPKPNLAKRLDDTFRKLGFHMKVLG 361 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1000.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1000.14.1 >prot_H-paniculata_contig1000.14.1 ID=prot_H-paniculata_contig1000.14.1|Name=mRNA_H-paniculata_contig1000.14.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1026bp MSFHRASKYAPSFCRSVGYPLQREEAAAIFKRYYDGDGFCGWHSFLQMYHback to top mRNA from alignment at H-paniculata_contig1000:14366..29900- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1000.14.1 ID=mRNA_H-paniculata_contig1000.14.1|Name=mRNA_H-paniculata_contig1000.14.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15535bp|location=Sequence derived from alignment at H-paniculata_contig1000:14366..29900- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1000:14366..29900- >mRNA_H-paniculata_contig1000.14.1 ID=mRNA_H-paniculata_contig1000.14.1|Name=mRNA_H-paniculata_contig1000.14.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6156bp|location=Sequence derived from alignment at H-paniculata_contig1000:14366..29900- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |