mRNA_H-paniculata_contig1.4.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1.4.1 vs. uniprot
Match: D7FNC8_ECTSI (Enoyl-ACP reductase enoyl-ACP reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNC8_ECTSI) HSP 1 Score: 362 bits (928), Expect = 1.110e-117 Identity = 217/374 (58.02%), Postives = 250/374 (66.84%), Query Frame = 1 Query: 331 MLRGQRALVIGVSNARSIAWGVADRWRREGAEVFITYQNERFRGSVEKLLHEKWEPFVEPFLGTKHGIGRIPAAPCDVSSEVEIEGLFRTLEHRGFC-SSSSSQLQPTR----EGDGNEV------EDRHRG----------------------------------------------EMDGEP----------KIDVILHSVAHAPTEAMQGVSFLQGTTKDAFISAHVVSAYSLVSTVRHALPFLAPGASVVALTYIGSQRAANNYNVMGPAKASLESCARALAKELG----SPENGGVRVNCLSPGPVRTMAARGITAFDQMRREAAQRAPLGRDAGIDEIAGAATFLASPLAACVTGQTIYADCGFSSVI 1239 ML+G+RALV+GV+NARSIAWG+ADRWR+EGAEVF+TYQ+ERFR VEKL+ + W PF IPAA CDV+SE ++ L+RTL+ RGFC SS SS L+ R +G E E R RG + G P +D++LHSVAHAPT+AM+ FL GTT++AF+SAHVVSAYSLVS+VRHALPFL+PGASVVALTYIGSQRAA NYNVMGPAKASLESCARALA ELG S GGVRVNCLSPGPVRTMAARGI FDQMRREAA RAPLGR A IDEIA AATFLASPL++ VTGQT+YADCGFS+V+ Sbjct: 1 MLQGRRALVVGVANARSIAWGIADRWRQEGAEVFVTYQSERFRKPVEKLVADSWGPFDTAG-------NAIPAAACDVTSEEDMAALWRTLQDRGFCYSSPSSPLEGGRCSKATDEGTEAAPRAAPEARSRGGXXXXXXXXXXXXXXAAEQAPGGSATTSNSXXRGAXXXXXXXXLRLQRQGLPVGSGVAAPRKTVDIVLHSVAHAPTDAMRQ-GFLMGTTREAFVSAHVVSAYSLVSSVRHALPFLSPGASVVALTYIGSQRAAANYNVMGPAKASLESCARALAAELGGDTTSQGPGGVRVNCLSPGPVRTMAARGIAGFDQMRREAAGRAPLGRAAEIDEIAAAATFLASPLSSAVTGQTLYADCGFSAVV 366
BLAST of mRNA_H-paniculata_contig1.4.1 vs. uniprot
Match: A0A2E2HML8_9BACT (Enoyl-[acyl-carrier-protein] reductase [NADH] n=5 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A2E2HML8_9BACT) HSP 1 Score: 209 bits (532), Expect = 3.640e-60 Identity = 126/299 (42.14%), Postives = 177/299 (59.20%), Query Frame = 1 Query: 331 MLRGQRALVIGVSNARSIAWGVADRWRREGAEVFITYQNERFRGSVEKLLHEKWEPFVEPFLGTKHGIGRIPAAPCDVSSEVEIEGLFRTLEHRGFCSSSSSQLQPTREGDGNEVEDRHRGEMDGEPKIDVILHSVAHAPTEAMQGVSFLQGTTKDAFISAHVVSAYSLVSTVRHALPFLAPGASVVALTYIGSQRAANNYNVMGPAKASLESCARALAKELGSPENGGVRVNCLSPGPVRTMAARGITAFDQMRREAAQRAPLGRDAGIDEIAGAATFLASPLAACVTGQTIYADCGF 1227 +L G++ +V GV+N RSIAW +A W+ EGA++ TYQ ER + +V +L E F E L T+ CDV+ + I+ +F NEV D+ G K+D++LHSVA AP EA++G SF+ GTT++AF AH VSAYSLV+ R A P + G S++A++Y+G++R +YNVMG AKASLE+ R LA +LG +RVNC+S GP+ T+AARGI F +M + A+ APL R+ +E+ TFLAS AA +TGQ +Y DCG+ Sbjct: 3 LLSGKKGIVFGVANKRSIAWAIAQAWKEEGAQLAFTYQGERLKDNVSQLA----ETFGEDTLITE----------CDVTQDDHIDRVF------------------------NEVGDKFEG------KLDLMLHSVAFAPKEALEG-SFV-GTTREAFRVAHDVSAYSLVALSRAAAPLMTAGGSIIAMSYLGAERVIQHYNVMGVAKASLEASTRYLASDLGEQN---IRVNCISAGPMNTLAARGIAGFTEMLKHNAKHAPLNRNVLPEELGATGTFLASDGAAAITGQVLYVDCGY 252
BLAST of mRNA_H-paniculata_contig1.4.1 vs. uniprot
Match: A0A2V6HV98_9BACT (Enoyl-[acyl-carrier-protein] reductase [NADH] n=7 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6HV98_9BACT) HSP 1 Score: 203 bits (517), Expect = 5.950e-58 Identity = 125/299 (41.81%), Postives = 169/299 (56.52%), Query Frame = 1 Query: 331 MLRGQRALVIGVSNARSIAWGVADRWRREGAEVFITYQNERFRGSVEKLLHEKWEPFVEPFLGTKHGIGRIPAAPCDVSSEVEIEGLFRTLEHRGFCSSSSSQLQPTREGDGNEVEDRHRGEMDGEPKIDVILHSVAHAPTEAMQGVSFLQGTTKDAFISAHVVSAYSLVSTVRHALPFLAPGASVVALTYIGSQRAANNYNVMGPAKASLESCARALAKELGSPENGGVRVNCLSPGPVRTMAARGITAFDQMRREAAQRAPLGRDAGIDEIAGAATFLASPLAACVTGQTIYADCGF 1227 +L G+ +V GV+N RSIAW +A W GA + YQ ER + +VE+L E + P PCDVS++ EI+ F + RGE D ID++LHS+A AP EA++G F+ GTT++AF AH +SAYSLV+ R A P + G S++A+TY GS++ +YNVMG AKASLE+ AR LA +LG + +RVNC+S GPV+T+AARGI+ F QM + +RAPL R E+ A FLAS AA +TGQ IY D G+ Sbjct: 5 VLEGKVGVVFGVANKRSIAWAIAQAWAAAGARLIFNYQGERLKENVEELTTAFGE--------------KTPLFPCDVSNDAEIKNFFEKV----------------------------RGETD---HIDLLLHSIAFAPKEALEG-DFV-GTTREAFRVAHDISAYSLVALAREAEPLMTNGGSILAMTYYGSEKVVPHYNVMGVAKASLEASARYLAYDLGRKK---IRVNCISAGPVQTLAARGISGFSQMLKHYQERAPLKRSCDTSELGAAGVFLASDGAAAITGQVIYVDGGY 253
BLAST of mRNA_H-paniculata_contig1.4.1 vs. uniprot
Match: A0A3M0Z777_9GAMM (Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0Z777_9GAMM) HSP 1 Score: 202 bits (514), Expect = 2.990e-57 Identity = 130/311 (41.80%), Postives = 177/311 (56.91%), Query Frame = 1 Query: 316 GGAGVMLRGQRALVIGVSNARSIAWGVADRWRREGAEVFITYQNERFRGSVEKLLHEKWEPFVEPFLGTKHGIGRIPAAPCDVSSEVEIEGLFRTLEHRGFCSSSSSQLQPTREGDGNEVEDRHRGEMDGEPKIDVILHSVAHAPTEAMQGVSFLQGTTKDAFISAHVVSAYSLVSTVRHALPFLAP-------GASVVALTYIGSQRAANNYNVMGPAKASLESCARALAKELGSPENGGVRVNCLSPGPVRTMAARGITAFDQMRREAAQRAPLGRDAGIDEIAGAATFLASPLAACVTGQTIYADCGF 1227 G G +L G+RAL+ GV++ RSIAWG+A GAE+ TYQNE+ R VE+L G G P DV++E +IE LF DR G D ++DV++HS+A+AP EA++G SF+ G T++A+ A VSAYSLV+ R ALP +A A+++ L+Y+G++R NYNVMGPAKA+LES R LA +LG G+RVN +S GP+RT+AA GI F +M A APL R+ I+++ GAA FL SPLAA VTG+ +Y D G+ Sbjct: 7 GHLGGLLEGRRALITGVASQRSIAWGIAQALHAAGAELAFTYQNEKLRTRVEQLAA---------------GTGSELVFPLDVTAEGQIEALF----------------------------DRLAGAWD---RLDVLVHSMAYAPREALEG-SFVAGCTREAWRVAQEVSAYSLVALARAALPLMAAREGEQGRDAALLTLSYLGAERVVPNYNVMGPAKAALESAVRYLAADLGPR---GIRVNAISAGPIRTLAASGIGDFRRMLEHTAANAPLRRNVTIEDVGGAAAFLCSPLAAGVTGEVLYVDAGY 267
BLAST of mRNA_H-paniculata_contig1.4.1 vs. uniprot
Match: A0A2V5SHS0_9BACT (Enoyl-[acyl-carrier-protein] reductase [NADH] n=2 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5SHS0_9BACT) HSP 1 Score: 201 bits (510), Expect = 6.310e-57 Identity = 127/302 (42.05%), Postives = 168/302 (55.63%), Query Frame = 1 Query: 331 MLRGQRALVIGVSNARSIAWGVADRWRREGAEVFITYQNERFRGSVEKLLHEKWEPFVEPFLGTKHGIGRIPAAPCDVSSEVEIEGLFRTLEHRGFCSSSSSQLQPTREGDGNEVEDRHRGEMDGEPKIDVILHSVAHAPTEAMQGVSFLQGTTKDAFISAHVVSAYSLVSTVRHALPFLAPGASVVALTYIGSQRAANNYNVMGPAKASLESCARALAKELGSPENGGVRVNCLSPGPVRTMAARGITAFDQMRREAAQRAPLGRDAGIDEIAGAATFLASPLAACVTGQTIYADCGFSSV 1236 ML G+ +V GV+N RSIAW +A W GA + YQ ER R +VE L+ E E GT P PCDVSS+ EI F + RGE + ++D++LHSVA+AP EA++G F+ T+++AF AH +SAYSLV R A P + G S+VA+TY G+Q+ +YNVMG AKASLE+ R LA +LG + +RVNC+S GPV T+AARGI+ F QM + +RAPL R E+ FLAS AA +TGQ IY D G+ + Sbjct: 5 MLAGKVGVVFGVANKRSIAWAIAKAWAAAGARLIFNYQGERLRENVEDLVSEFGE-------GT-------PLFPCDVSSDAEISAFFEKV----------------------------RGETN---QLDLMLHSVAYAPKEALEG-DFVN-TSREAFRIAHDISAYSLVGLAREAAPMMPNGGSIVAMTYYGAQKVVPHYNVMGVAKASLEASTRYLAYDLGPKK---IRVNCISAGPVNTLAARGISGFTQMLKYCQERAPLKRSCDPSELGATGVFLASDGAAAITGQVIYVDGGYQII 256
BLAST of mRNA_H-paniculata_contig1.4.1 vs. uniprot
Match: A0A2V5MVK3_9BACT (Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5MVK3_9BACT) HSP 1 Score: 200 bits (509), Expect = 8.310e-57 Identity = 125/299 (41.81%), Postives = 173/299 (57.86%), Query Frame = 1 Query: 331 MLRGQRALVIGVSNARSIAWGVADRWRREGAEVFITYQNERFRGSVEKLLHEKWEPFVEPFLGTKHGIGRIPAAPCDVSSEVEIEGLFRTLEHRGFCSSSSSQLQPTREGDGNEVEDRHRGEMDGEPKIDVILHSVAHAPTEAMQGVSFLQGTTKDAFISAHVVSAYSLVSTVRHALPFLAPGASVVALTYIGSQRAANNYNVMGPAKASLESCARALAKELGSPENGGVRVNCLSPGPVRTMAARGITAFDQMRREAAQRAPLGRDAGIDEIAGAATFLASPLAACVTGQTIYADCGF 1227 +L G+ +V GV+N RSIAW +A W +EGA++ TYQ ER + +VE+L GT I PCDV+ + EI G+F+T+ GE G K+ ++LHSVA AP EA++G +FL T++DAF AH VSAYSLV+ R A P + G S++++TY GS++ +YNVMG AKASLE+ R LA +LG + +RVNC+S GPV T+AARG++ F +M ++ APL R+ DE+ FLAS AA +TGQ IY DCG+ Sbjct: 3 LLAGKLGIVFGVANKRSIAWAIAQAWHKEGAKLAFTYQGERLKENVEELA------------GTFGADALI--LPCDVTKDEEIAGVFKTV-----------------------------GERFG--KLHLLLHSVAFAPREALEG-TFLN-TSRDAFRIAHDVSAYSLVALARAAEPLMPDGGSIISMTYYGSEKVIPHYNVMGVAKASLEASTRYLAYDLGPKK---IRVNCISAGPVNTLAARGVSGFTEMLKQYEAHAPLKRNVLPDELGATGIFLASDGAAAITGQVIYVDCGY 251
BLAST of mRNA_H-paniculata_contig1.4.1 vs. uniprot
Match: C9RCR3_AMMDK (Enoyl-[acyl-carrier-protein] reductase [NADH] n=2 Tax=Ammonifex TaxID=42837 RepID=C9RCR3_AMMDK) HSP 1 Score: 199 bits (507), Expect = 1.680e-56 Identity = 124/303 (40.92%), Postives = 175/303 (57.76%), Query Frame = 1 Query: 331 MLRGQRALVIGVSNARSIAWGVADRWRREGAEVFITYQNERFRGSVEKLLHEKWEPFVEPFLGTKHGIGRIPAAPCDVSSEVEIEGLFRTLEHRGFCSSSSSQLQPTREGDGNEVEDRHRGEMDGEPKIDVILHSVAHAPTEAMQGVSFLQGTTKDAFISAHVVSAYSLVSTVRHALPFLAP-GASVVALTYIGSQRAANNYNVMGPAKASLESCARALAKELGSPENGGVRVNCLSPGPVRTMAARGITAFDQMRREAAQRAPLGRDAGIDEIAGAATFLASPLAACVTGQTIYADCGFSSV 1236 ++ G+RALV+GV+N SIAWG+A REGA +++ YQNERF +V +L E ++P IP + CDV+ ++E LF +E R K+D+++HS+A AP EA++G + TT + + A VSAYSLV RHA P L G S++ LTY+GSQRA NYNVMG AKA+LE+ R LA +LG P N +RVN +S GP++T+AARG+ F + + ++APL R+ +E+ A FLAS LA+ VTG+ I+ DCGF +V Sbjct: 3 LVTGKRALVLGVANKHSIAWGIAQVLHREGASLWLNYQNERFYKNVAELAAE-----LDP---------NIPLSECDVTKPEQVENLFAEIEKRWG-------------------------------KLDILVHSLAFAPREALEGEFYK--TTLEQWNIAMEVSAYSLVLCARHAKPLLEKEGGSIITLTYLGSQRAVKNYNVMGVAKAALEAAVRYLAADLG-PFN--IRVNAISAGPIKTVAARGVAGFSSILKVVEEKAPLRRNVTQEEVGKVALFLASDLASAVTGEVIFVDCGFHAV 255
BLAST of mRNA_H-paniculata_contig1.4.1 vs. uniprot
Match: A0A2V2S2X7_9BACT (Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V2S2X7_9BACT) HSP 1 Score: 197 bits (502), Expect = 8.780e-56 Identity = 127/298 (42.62%), Postives = 166/298 (55.70%), Query Frame = 1 Query: 334 LRGQRALVIGVSNARSIAWGVADRWRREGAEVFITYQNERFRGSVEKLLHEKWEPFVEPFLGTKHGIGRIPAAPCDVSSEVEIEGLFRTLEHRGFCSSSSSQLQPTREGDGNEVEDRHRGEMDGEPKIDVILHSVAHAPTEAMQGVSFLQGTTKDAFISAHVVSAYSLVSTVRHALPFLAPGASVVALTYIGSQRAANNYNVMGPAKASLESCARALAKELGSPENGGVRVNCLSPGPVRTMAARGITAFDQMRREAAQRAPLGRDAGIDEIAGAATFLASPLAACVTGQTIYADCGF 1227 L G+ +V GV+N RSIAW +A W GA + TYQ ER + +V++L GT I PCDV+ + EI +F+T GE G K+ ++LHSVA+AP EA++G FL TT++AF AH VSAYSLV+ R A P + G S+VA+TY GS++ YNVMG AKASLE+ R LA +LG + +RVNC+S GPV T+AARGI+ F+QM R + APL R+ E+ FLAS AA VTGQ IY DCG+ Sbjct: 4 LAGKTGIVFGVANQRSIAWAIAQAWHEAGATLAFTYQGERIKENVQQLA------------GTFGADTLI--LPCDVTKDEEIAAVFKTA-----------------------------GEKYG--KLHLLLHSVAYAPREALEG-DFLS-TTREAFRQAHDVSAYSLVALARAAAPLMTEGGSIVAMTYYGSEKVVPRYNVMGVAKASLEASTRYLAYDLGPKK---IRVNCISAGPVSTLAARGISGFNQMLRHYEEHAPLKRNVTTRELGATGLFLASDGAAAVTGQVIYVDCGY 251
BLAST of mRNA_H-paniculata_contig1.4.1 vs. uniprot
Match: A0A2W5YP65_9BACT (Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A2W5YP65_9BACT) HSP 1 Score: 197 bits (502), Expect = 9.330e-56 Identity = 119/299 (39.80%), Postives = 167/299 (55.85%), Query Frame = 1 Query: 331 MLRGQRALVIGVSNARSIAWGVADRWRREGAEVFITYQNERFRGSVEKLLHEKWEPFVEPFLGTKHGIGRIPAAPCDVSSEVEIEGLFRTLEHRGFCSSSSSQLQPTREGDGNEVEDRHRGEMDGEPKIDVILHSVAHAPTEAMQGVSFLQGTTKDAFISAHVVSAYSLVSTVRHALPFLAPGASVVALTYIGSQRAANNYNVMGPAKASLESCARALAKELGSPENGGVRVNCLSPGPVRTMAARGITAFDQMRREAAQRAPLGRDAGIDEIAGAATFLASPLAACVTGQTIYADCGF 1227 +L G+ +V GV+N RSIAW +A W GA++ YQ ER + +VE+L+ E E +P PCDVS + EI F+ + + ++D++LHSVA AP EA++G FL TT++AF +AH +SAYSLV+ R A P ++ G S+VA+TY G+++ +YNVMG AKASLE+ R LA +LG + +RVNC+S GPV T+AARGI+ F M ++ +RAPL R E+ FLAS AA +TGQ IY D G+ Sbjct: 5 VLAGKTGVVFGVANKRSIAWAIAKAWAAAGAKLIFNYQGERLKDNVEELVGEFGE--------------NVPLFPCDVSKDEEITRFFQEVRNHTA-------------------------------RLDLMLHSVAFAPKEALEG-DFLS-TTREAFRTAHDISAYSLVALAREAAPMMSDGGSIVAMTYYGAEKVVPHYNVMGVAKASLEASTRYLAYDLGPKK---IRVNCISAGPVNTLAARGISGFSAMLKQYQERAPLKRSCEPAELGATGVFLASDAAAAITGQVIYVDGGY 253
BLAST of mRNA_H-paniculata_contig1.4.1 vs. uniprot
Match: A0A2E4N9K1_9BACT (Enoyl-[acyl-carrier-protein] reductase [NADH] n=7 Tax=Verrucomicrobia TaxID=74201 RepID=A0A2E4N9K1_9BACT) HSP 1 Score: 197 bits (501), Expect = 1.350e-55 Identity = 118/299 (39.46%), Postives = 169/299 (56.52%), Query Frame = 1 Query: 331 MLRGQRALVIGVSNARSIAWGVADRWRREGAEVFITYQNERFRGSVEKLLHEKWEPFVEPFLGTKHGIGRIPAAPCDVSSEVEIEGLFRTLEHRGFCSSSSSQLQPTREGDGNEVEDRHRGEMDGEPKIDVILHSVAHAPTEAMQGVSFLQGTTKDAFISAHVVSAYSLVSTVRHALPFLAPGASVVALTYIGSQRAANNYNVMGPAKASLESCARALAKELGSPENGGVRVNCLSPGPVRTMAARGITAFDQMRREAAQRAPLGRDAGIDEIAGAATFLASPLAACVTGQTIYADCGF 1227 +L G+ +V GV+N SIAWG+A W GA + T Q ER + V+KL+ + F + L CDVS + +I+ +F NEV G K+D++LHS+A+AP EA++G F+ T +DAF +AH +SAYSLV+ + A P ++ G S++A++Y G+++ +YNVMG AKA+LE+ R LA +LG+ G+RVNC+S GPV T+AARGI F QM + + APLGR+ +EI FLAS A +TGQ IY DCG+ Sbjct: 4 LLDGKTGVVFGVANKNSIAWGIAKAWHNAGARLVFTCQGERLKDKVQKLVSD----FGDDTL----------VIECDVSDDADIDRVF------------------------NEVGTHFDG------KLDMVLHSIAYAPREALEG-RFVD-TARDAFSTAHDISAYSLVALAKRAAPLMSEGGSIIAMSYYGAEKVVKHYNVMGVAKAALEASTRYLAADLGAE---GIRVNCISAGPVNTLAARGIAGFSQMLKHYEEHAPLGRNVTHEEIGQTGVFLASDGGAAITGQVIYVDCGY 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1.4.1 >prot_H-paniculata_contig1.4.1 ID=prot_H-paniculata_contig1.4.1|Name=mRNA_H-paniculata_contig1.4.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=304bp MLRGQRALVIGVSNARSIAWGVADRWRREGAEVFITYQNERFRGSVEKLLback to top mRNA from alignment at H-paniculata_contig1:48945..58560+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1.4.1 ID=mRNA_H-paniculata_contig1.4.1|Name=mRNA_H-paniculata_contig1.4.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9616bp|location=Sequence derived from alignment at H-paniculata_contig1:48945..58560+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1:48945..58560+ >mRNA_H-paniculata_contig1.4.1 ID=mRNA_H-paniculata_contig1.4.1|Name=mRNA_H-paniculata_contig1.4.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at H-paniculata_contig1:48945..58560+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |