|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005707714.1 |
| PFAMs | PH,Pkinase |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K04456,ko:K13303 |
| KEGG Pathway | ko01521,ko01522,ko01524,ko04010,ko04012,ko04014,ko04015,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04140,ko04150,ko04151,ko04152,ko04210,ko04211,ko04212,ko04213,ko04218,ko04261,ko04370,ko04371,ko04380,ko04510,ko04550,ko04611,ko04620,ko04630,ko04660,ko04662,ko04664,ko04666,ko04668,ko04722,ko04725,ko04728,ko04910,ko04914,ko04915,ko04917,ko04919,ko04920,ko04922,ko04923,ko04926,ko04931,ko04932,ko04933,ko04973,ko05142,ko05145,ko05152,ko05160,ko05161,ko05162,ko05164,ko05165,ko05166,ko05167,ko05169,ko05200,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05218,ko05220,ko05221,ko05222,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,ko05418,map01521,map01522,map01524,map04010,map04012,map04014,map04015,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04140,map04150,map04151,map04152,map04210,map04211,map04212,map04213,map04218,map04261,map04370,map04371,map04380,map04510,map04550,map04611,map04620,map04630,map04660,map04662,map04664,map04666,map04668,map04722,map04725,map04728,map04910,map04914,map04915,map04917,map04919,map04920,map04922,map04923,map04926,map04931,map04932,map04933,map04973,map05142,map05145,map05152,map05160,map05161,map05162,map05164,map05165,map05166,map05167,map05169,map05200,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05218,map05220,map05221,map05222,map05223,map05224,map05225,map05226,map05230,map05231,map05418 |
| KEGG Module | M00676 |
| Evalue | 3.17e-62 |
| EggNOG OGs | KOG0598@1|root,KOG0598@2759|Eukaryota |
| EC | 2.7.11.1 |
| Description | protein serine/threonine kinase activity |
| COG category | H |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01001 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi11505.t1 ID=Gvermi11505.t1|Name=Gvermi11505.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=734bp MSRGPREDWRRASGSLNKRSRRAAIFDAAARSADSFSSVAGRWSLSRRRR SRAASDHKRLRKRRSFHASQRALDDGTPSLHTNTPFVIATTADEHRAHRN HPVSSRLPSYGSDGLSAISLRDPDSRYAHPALRPTFDALRLLRKIPDVMA GWVQIKCPTGPGRLRWSTWTMFWAELRGGYVLLTRDHNSLAAMSDATCQN PVDYIFGAAHCHISRIISRSGAVRLRLSRTASRRRNDSATATSSGIADDD DLNYRPVESDARLSERSGKSSGSEKRTFGSTMMRIMSGKMKAKPSTSELA ISEEISAELVMKIPSAPEADKWEWALRNTTQAYESKRLGDFQLIDVLGAG AFGRVYLVHDTVKGEYLALKVLQKSLVFRDRLHFESAVNERLTLELVRGK PFMAQLRYAFQTASCLYLVTDFYEGGDLFSFLRAHHKDVKESQAIRIIAE VILALQSMHDMGIVYRDLKPENVLLDYEGHVRLADLGLAKLLNRDNDYLT KTICGSLSYAAPEMLSEKQYGIAFDMWTLGVFIYQVLTGEMPFETENRSR QEILEDQRKAEIPVNGLSDEGYSLVCALLRPNPLRRPTCPELRDYPIFAN IDWDELMRKRPHPNSVKDVMEKISLQARSREKEGPTTENVGGESGMYLLR NFDPGEWSDMSFSDVSDGCSTASFFKPNFNVIDELPNMTRWIPGWSFTAD NVVPLSKPQLAVPQLGRKPVSRNARRLSEKAYR* back to topspliced messenger RNA >Gvermi11505.t1 ID=Gvermi11505.t1|Name=Gvermi11505.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2202bp|location=Sequence derived from alignment at ScGOVlb_3404:622947..625148+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCTCGAGGTCCCCGCGAAGACTGGCGTCGCGCCTCCGGCTCCCTTAA CAAGCGCTCccgccgcgccgccatcttcgacgccgccgcgcgcagcgccg actccttctcctccgtcgctggtcgttggtccctgtcgcgtcgccgtcgc tCCCGCGCCGCTTCCGACCACAAACGCCTTCGCAAGCGCCGTTCGTTCCA CGCCTCCCAGAGAGCTCTCGATGACGGCACCCCGTCGCTGCACACCAACA CCCCTTTCGTCATCGCAACCACCGCTGACGAGCACCGCGCCCACCGCAAC CACCCCGTCTCGTCCAGGCTCCCGTCCTATGGCAGCGACGGCCTCTCCGC CATCAGTCTGCGCGACCCGGACTCCCGCTATGCCCACCCCGCCCTCAGAC CCACCTTTGACGCCTTGCGTCTTCTCCGCAAGATCCCCGACGTCATGGCC GGCTGGGTGCAAATCAAGTGCCCGACCGGCCCCGGCCGTCTCAGGTGGTC GACTTGGACCATGTTCTGGGCCGAGCTGCGTGGGGGCTACGTCCTGCTCA CGCGCGACCACAACTCGCTAGCTGCCATGTCCGACGCCACCTGCCAGAAC CCCGTCGACTACATCTTTGGCGCCGCCCACTGCCACATTTCGCGCATCAT CTCGCGCTCGGGcgccgtgcgcctgcgcctctcgcgcaccgcctcccgcc gtcgcaacgactccgccacagccACAAGTTCGGGAATCGCCGACGATGAT GACCTCAACTACCGTCCCGTCGAGTCGGACGCTCGCCTTTCGGAGCGATC TGGAAAGAGCAGTGGCTCGGAGAAGCGCACTTTCGGATCGACCATGATGA GGATCATGAGCGGCAAGATGAAGGCCAAGCCTTCCACTTCGGAGCTTGCC ATCTCCGAAGAGATCAGCGCCGAGCTCGTCATGAAGATCCCTAGCGCCCC GGAGGCCGACAAATGGGAATGGGCTTTGAGAAACACCACCCAGGCGTATG AATCGAAGCGTCTTGGCGATTTTCAGCTCATTGACGTTCTCGGCGCTGGC GCCTTTGGCCGTGTGTACCTGGTCCATGATACTGTCAAGGGAGAGTACCT CGCGCTCAAGGTGCTGCAGAAGAGCTTGGTTTTCAGGGATAGGCTCCATT TTGAAAGTGCGGTTAATGAGCGTCTCACGTTAGAGCTTGTGCGGGGAAAA CCGTTTATGGCTCAGCTACGATACGCGTTTCAGACTGCGTCATGCCTGTA TCTTGTCACAGACTTCTACGAGGGCGGCGATCTGTTTTCTTTTCTACGAG CGCATCATAAGGATGTGAAAGAGAGTCAGGCAATTCGCATCATTGCAGAA GTTATTTTGGCTCTACAGAGTATGCACGACATGGGGATCGTGTACAGAGA TCTCAAGCCGGAAAATGTGCTGCTGGATTACGAGGGACACGTTCGCTTGG CCGATCTGGGGCTGGCAAAATTACTTAACCGCGACAACGACTACTTGACC AAGACTATTTGCGGCTCACTGTCTTATGCCGCCCCGGAGATGTTGAGCGA GAAGCAGTATGGCATTGCGTTTGATATGTGGACTTTGGGCGTCTTCATAT ATCAGGTGCTAACTGGCGAAATGCCGTTTGAGACGGAAAATAGGAGCCGC CAGGAAATACTGGAAGATCAACGAAAGGCTGAAATTCCTGTGAATGGTCT GTCAGACGAAGGCTATTCATTGGTTTGCGCGCTGCTGCGCCCTAACCCGC TCCGACGTCCAACGTGCCCAGAGCTGAGAGACTACCCGATTTTTGCAAAT ATCGATTGGGATGAGCTCATGCGCAAGCGACCACACCCAAATTCAGTGAA GGATGTTATGGAAAAAATATCGTTGCAGGCGAGGAGTCGGGAGAAGGAGG GACCCACGACGGAGAACGTTGGGGGCGAAAGCGGTATGTACTTGCTGCGC AACTTCGACCCCGGGGAGTGGTCCGACATGTCTTTCAGTGATGTGTCGGA TGGTTGTTCTACGGCAAGCTTTTTCAAACCGAATTTCAACGTCATCGACG AGTTGCCAAACATGACCAGATGGATTCCCGGTTGGAGTTTTACTGCTGAC AATGTCGTGCCCTTGTCGAAACCGCAGCTAGCCGTGCCGCAATTAGGCAG GAAGCCTGTGTCTCGGAACGCGCGACGCTTATCGGAAAAAGCATATCGTT AG back to topprotein sequence of Gvermi11505.t1 >Gvermi11505.t1 ID=Gvermi11505.t1|Name=Gvermi11505.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=734bp
MSRGPREDWRRASGSLNKRSRRAAIFDAAARSADSFSSVAGRWSLSRRRR SRAASDHKRLRKRRSFHASQRALDDGTPSLHTNTPFVIATTADEHRAHRN HPVSSRLPSYGSDGLSAISLRDPDSRYAHPALRPTFDALRLLRKIPDVMA GWVQIKCPTGPGRLRWSTWTMFWAELRGGYVLLTRDHNSLAAMSDATCQN PVDYIFGAAHCHISRIISRSGAVRLRLSRTASRRRNDSATATSSGIADDD DLNYRPVESDARLSERSGKSSGSEKRTFGSTMMRIMSGKMKAKPSTSELA ISEEISAELVMKIPSAPEADKWEWALRNTTQAYESKRLGDFQLIDVLGAG AFGRVYLVHDTVKGEYLALKVLQKSLVFRDRLHFESAVNERLTLELVRGK PFMAQLRYAFQTASCLYLVTDFYEGGDLFSFLRAHHKDVKESQAIRIIAE VILALQSMHDMGIVYRDLKPENVLLDYEGHVRLADLGLAKLLNRDNDYLT KTICGSLSYAAPEMLSEKQYGIAFDMWTLGVFIYQVLTGEMPFETENRSR QEILEDQRKAEIPVNGLSDEGYSLVCALLRPNPLRRPTCPELRDYPIFAN IDWDELMRKRPHPNSVKDVMEKISLQARSREKEGPTTENVGGESGMYLLR NFDPGEWSDMSFSDVSDGCSTASFFKPNFNVIDELPNMTRWIPGWSFTAD NVVPLSKPQLAVPQLGRKPVSRNARRLSEKAYR* back to topmRNA from alignment at ScGOVlb_3404:622947..625148+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi11505.t1 ID=Gvermi11505.t1|Name=Gvermi11505.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2202bp|location=Sequence derived from alignment at ScGOVlb_3404:622947..625148+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCTCGAGGTCCCCGCGAAGACTGGCGTCGCGCCTCCGGCTCCCTTAA
CAAGCGCTCccgccgcgccgccatcttcgacgccgccgcgcgcagcgccg
actccttctcctccgtcgctggtcgttggtccctgtcgcgtcgccgtcgc
tCCCGCGCCGCTTCCGACCACAAACGCCTTCGCAAGCGCCGTTCGTTCCA
CGCCTCCCAGAGAGCTCTCGATGACGGCACCCCGTCGCTGCACACCAACA
CCCCTTTCGTCATCGCAACCACCGCTGACGAGCACCGCGCCCACCGCAAC
CACCCCGTCTCGTCCAGGCTCCCGTCCTATGGCAGCGACGGCCTCTCCGC
CATCAGTCTGCGCGACCCGGACTCCCGCTATGCCCACCCCGCCCTCAGAC
CCACCTTTGACGCCTTGCGTCTTCTCCGCAAGATCCCCGACGTCATGGCC
GGCTGGGTGCAAATCAAGTGCCCGACCGGCCCCGGCCGTCTCAGGTGGTC
GACTTGGACCATGTTCTGGGCCGAGCTGCGTGGGGGCTACGTCCTGCTCA
CGCGCGACCACAACTCGCTAGCTGCCATGTCCGACGCCACCTGCCAGAAC
CCCGTCGACTACATCTTTGGCGCCGCCCACTGCCACATTTCGCGCATCAT
CTCGCGCTCGGGcgccgtgcgcctgcgcctctcgcgcaccgcctcccgcc
gtcgcaacgactccgccacagccACAAGTTCGGGAATCGCCGACGATGAT
GACCTCAACTACCGTCCCGTCGAGTCGGACGCTCGCCTTTCGGAGCGATC
TGGAAAGAGCAGTGGCTCGGAGAAGCGCACTTTCGGATCGACCATGATGA
GGATCATGAGCGGCAAGATGAAGGCCAAGCCTTCCACTTCGGAGCTTGCC
ATCTCCGAAGAGATCAGCGCCGAGCTCGTCATGAAGATCCCTAGCGCCCC
GGAGGCCGACAAATGGGAATGGGCTTTGAGAAACACCACCCAGGCGTATG
AATCGAAGCGTCTTGGCGATTTTCAGCTCATTGACGTTCTCGGCGCTGGC
GCCTTTGGCCGTGTGTACCTGGTCCATGATACTGTCAAGGGAGAGTACCT
CGCGCTCAAGGTGCTGCAGAAGAGCTTGGTTTTCAGGGATAGGCTCCATT
TTGAAAGTGCGGTTAATGAGCGTCTCACGTTAGAGCTTGTGCGGGGAAAA
CCGTTTATGGCTCAGCTACGATACGCGTTTCAGACTGCGTCATGCCTGTA
TCTTGTCACAGACTTCTACGAGGGCGGCGATCTGTTTTCTTTTCTACGAG
CGCATCATAAGGATGTGAAAGAGAGTCAGGCAATTCGCATCATTGCAGAA
GTTATTTTGGCTCTACAGAGTATGCACGACATGGGGATCGTGTACAGAGA
TCTCAAGCCGGAAAATGTGCTGCTGGATTACGAGGGACACGTTCGCTTGG
CCGATCTGGGGCTGGCAAAATTACTTAACCGCGACAACGACTACTTGACC
AAGACTATTTGCGGCTCACTGTCTTATGCCGCCCCGGAGATGTTGAGCGA
GAAGCAGTATGGCATTGCGTTTGATATGTGGACTTTGGGCGTCTTCATAT
ATCAGGTGCTAACTGGCGAAATGCCGTTTGAGACGGAAAATAGGAGCCGC
CAGGAAATACTGGAAGATCAACGAAAGGCTGAAATTCCTGTGAATGGTCT
GTCAGACGAAGGCTATTCATTGGTTTGCGCGCTGCTGCGCCCTAACCCGC
TCCGACGTCCAACGTGCCCAGAGCTGAGAGACTACCCGATTTTTGCAAAT
ATCGATTGGGATGAGCTCATGCGCAAGCGACCACACCCAAATTCAGTGAA
GGATGTTATGGAAAAAATATCGTTGCAGGCGAGGAGTCGGGAGAAGGAGG
GACCCACGACGGAGAACGTTGGGGGCGAAAGCGGTATGTACTTGCTGCGC
AACTTCGACCCCGGGGAGTGGTCCGACATGTCTTTCAGTGATGTGTCGGA
TGGTTGTTCTACGGCAAGCTTTTTCAAACCGAATTTCAACGTCATCGACG
AGTTGCCAAACATGACCAGATGGATTCCCGGTTGGAGTTTTACTGCTGAC
AATGTCGTGCCCTTGTCGAAACCGCAGCTAGCCGTGCCGCAATTAGGCAG
GAAGCCTGTGTCTCGGAACGCGCGACGCTTATCGGAAAAAGCATATCGTT
AG back to topCoding sequence (CDS) from alignment at ScGOVlb_3404:622947..625148+ >Gvermi11505.t1 ID=Gvermi11505.t1|Name=Gvermi11505.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2202bp|location=Sequence derived from alignment at ScGOVlb_3404:622947..625148+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCTCGAGGTCCCCGCGAAGACTGGCGTCGCGCCTCCGGCTCCCTTAA CAAGCGCTCccgccgcgccgccatcttcgacgccgccgcgcgcagcgccg actccttctcctccgtcgctggtcgttggtccctgtcgcgtcgccgtcgc tCCCGCGCCGCTTCCGACCACAAACGCCTTCGCAAGCGCCGTTCGTTCCA CGCCTCCCAGAGAGCTCTCGATGACGGCACCCCGTCGCTGCACACCAACA CCCCTTTCGTCATCGCAACCACCGCTGACGAGCACCGCGCCCACCGCAAC CACCCCGTCTCGTCCAGGCTCCCGTCCTATGGCAGCGACGGCCTCTCCGC CATCAGTCTGCGCGACCCGGACTCCCGCTATGCCCACCCCGCCCTCAGAC CCACCTTTGACGCCTTGCGTCTTCTCCGCAAGATCCCCGACGTCATGGCC GGCTGGGTGCAAATCAAGTGCCCGACCGGCCCCGGCCGTCTCAGGTGGTC GACTTGGACCATGTTCTGGGCCGAGCTGCGTGGGGGCTACGTCCTGCTCA CGCGCGACCACAACTCGCTAGCTGCCATGTCCGACGCCACCTGCCAGAAC CCCGTCGACTACATCTTTGGCGCCGCCCACTGCCACATTTCGCGCATCAT CTCGCGCTCGGGcgccgtgcgcctgcgcctctcgcgcaccgcctcccgcc gtcgcaacgactccgccacagccACAAGTTCGGGAATCGCCGACGATGAT GACCTCAACTACCGTCCCGTCGAGTCGGACGCTCGCCTTTCGGAGCGATC TGGAAAGAGCAGTGGCTCGGAGAAGCGCACTTTCGGATCGACCATGATGA GGATCATGAGCGGCAAGATGAAGGCCAAGCCTTCCACTTCGGAGCTTGCC ATCTCCGAAGAGATCAGCGCCGAGCTCGTCATGAAGATCCCTAGCGCCCC GGAGGCCGACAAATGGGAATGGGCTTTGAGAAACACCACCCAGGCGTATG AATCGAAGCGTCTTGGCGATTTTCAGCTCATTGACGTTCTCGGCGCTGGC GCCTTTGGCCGTGTGTACCTGGTCCATGATACTGTCAAGGGAGAGTACCT CGCGCTCAAGGTGCTGCAGAAGAGCTTGGTTTTCAGGGATAGGCTCCATT TTGAAAGTGCGGTTAATGAGCGTCTCACGTTAGAGCTTGTGCGGGGAAAA CCGTTTATGGCTCAGCTACGATACGCGTTTCAGACTGCGTCATGCCTGTA TCTTGTCACAGACTTCTACGAGGGCGGCGATCTGTTTTCTTTTCTACGAG CGCATCATAAGGATGTGAAAGAGAGTCAGGCAATTCGCATCATTGCAGAA GTTATTTTGGCTCTACAGAGTATGCACGACATGGGGATCGTGTACAGAGA TCTCAAGCCGGAAAATGTGCTGCTGGATTACGAGGGACACGTTCGCTTGG CCGATCTGGGGCTGGCAAAATTACTTAACCGCGACAACGACTACTTGACC AAGACTATTTGCGGCTCACTGTCTTATGCCGCCCCGGAGATGTTGAGCGA GAAGCAGTATGGCATTGCGTTTGATATGTGGACTTTGGGCGTCTTCATAT ATCAGGTGCTAACTGGCGAAATGCCGTTTGAGACGGAAAATAGGAGCCGC CAGGAAATACTGGAAGATCAACGAAAGGCTGAAATTCCTGTGAATGGTCT GTCAGACGAAGGCTATTCATTGGTTTGCGCGCTGCTGCGCCCTAACCCGC TCCGACGTCCAACGTGCCCAGAGCTGAGAGACTACCCGATTTTTGCAAAT ATCGATTGGGATGAGCTCATGCGCAAGCGACCACACCCAAATTCAGTGAA GGATGTTATGGAAAAAATATCGTTGCAGGCGAGGAGTCGGGAGAAGGAGG GACCCACGACGGAGAACGTTGGGGGCGAAAGCGGTATGTACTTGCTGCGC AACTTCGACCCCGGGGAGTGGTCCGACATGTCTTTCAGTGATGTGTCGGA TGGTTGTTCTACGGCAAGCTTTTTCAAACCGAATTTCAACGTCATCGACG AGTTGCCAAACATGACCAGATGGATTCCCGGTTGGAGTTTTACTGCTGAC AATGTCGTGCCCTTGTCGAAACCGCAGCTAGCCGTGCCGCAATTAGGCAG GAAGCCTGTGTCTCGGAACGCGCGACGCTTATCGGAAAAAGCATATCGTT AG back to top
|