Gvermi12197.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12197.t1
Unique NameGvermi12197.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length420
Homology
BLAST of Gvermi12197.t1 vs. uniprot
Match: A0A2V3J134_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J134_9FLOR)

HSP 1 Score: 560 bits (1442), Expect = 5.850e-197
Identity = 293/423 (69.27%), Postives = 328/423 (77.54%), Query Frame = 0
Query:    1 MPRAANVSFKFPTLPNPL-KPPASDKMTLDSMYNPAATGVFQKAIRPSIRRERLVAITAFVAGFLVCHLFLTSGSAIESGLFDKQHSSKAYQQPVPQPNAYQYPPPYAVHPHYVPQYPAPNFVAPPGQQSVATAAQLAQQPQPVSAAPPVSLAP---PAPSVKYCEDTSRNDGPCIFDIGHNNGQDTRNYLNEHPKSRVVAIEANPTLVADSKTKFADAIEQGRLQLVGIGITAIDPKKDKTEARPKLKFYVNKNDKFSSFVESLGCRNWGGDVTPPGDRSFCTVMELETRTCSDLVREYGTPVYMKIDIEGKDRACLESLETLPESDRPKYASIENVTELDINILLRLGYKKFKVVNQNLLQEGTTDEEEGHSGPWGEDADDAFVGKRWQTADELKKRLPLKNKMTLNGVERTAWYDLHGSK 419
            MPRA+NV FK+P     L K  +SDKMT+D++YNP+A GVF KAIRP++RRERL+ ITAFVAGFLVCHLFLTSGSAIE+ LFDK  S +    P PQ  A    PPY  +P                 Q V  +                  A    PA SV+YCEDTSRN+GPCIFDIGHN+GQDTRNYLN++P SRVVAIEANPTLV  SK KFADAI   RL+LVGIGITAIDPKK+  E RPKLKFYVN+NDKFSSFVE+LGCRN+ G+VT PGDR+FC+VMEL+TR+CSDLVREYGTPVY KIDIEGKDRACLESLE LP+S+RPKY SIENVTELDI+ILLRLGY KFK VNQNLLQEGTTDEEEGHSGPWGEDA+DAF GK+WQTA+ELK RLPLK KM LNGVERTAWYDLH  K
Sbjct:    1 MPRASNVGFKYPPTSVQLPKSSSSDKMTMDALYNPSAAGVFHKAIRPTVRRERLIGITAFVAGFLVCHLFLTSGSAIETTLFDKTTSQRTGFPPSPQHYAI---PPYPYNPQVQXXXXXXXXXXXXXXQQVLASXXXXXXXXXXXXXXXXXXAGQNLPASSVRYCEDTSRNNGPCIFDIGHNSGQDTRNYLNDYPSSRVVAIEANPTLVKASKAKFADAIASDRLRLVGIGITAIDPKKENQE-RPKLKFYVNRNDKFSSFVENLGCRNYTGEVTAPGDRTFCSVMELDTRSCSDLVREYGTPVYFKIDIEGKDRACLESLEALPQSERPKYTSIENVTELDIDILLRLGYTKFKAVNQNLLQEGTTDEEEGHSGPWGEDAEDAFTGKKWQTAEELKNRLPLKRKMILNGVERTAWYDLHAGK 419          
BLAST of Gvermi12197.t1 vs. uniprot
Match: A0A1X6PBS3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBS3_PORUM)

HSP 1 Score: 186 bits (471), Expect = 8.770e-53
Identity = 108/252 (42.86%), Postives = 151/252 (59.92%), Query Frame = 0
Query:  173 FDIGHNNGQDTRNYLNEHPKSRVVAIEANPTLVADSKTKFADAIEQGRLQLVGIGITAIDPKKDKTEARPKLKFYVNKNDK-FSSFVESLGCRNWGGDVTPPGD--RSFCTVMELETRTCSDLVREYGTPVYMKIDIEGKDRACLESLETLPESDRPKYASIENVTELDINILLRLGYKKFKVVNQNLLQEGTTDEEE--GHSGPWGEDADDAFVGKRWQTADELKKRLPLKNKMTLNGVERTAWYDLHGSK 419
             D+G N+GQD+  YL      RVVA++ANP L+A  + +FADA+  G L LV  G+  +   +    A  KL FY +K D  +SSF    GCR+        GD   ++CT + + TRTC+ L+ E+GTP+ +KIDIEG+D ACLESL  LPE  RP Y S+ENVT   + +L  LGY + KVV+Q ++ +    +    G+SGP+GE A D   G+ W +A+E+  RLPL  ++   GV    WYDLHG +
Sbjct:    1 MDMGFNSGQDSHFYLGGG--HRVVAVDANPVLIAAGRRRFADALVNGSLVLVPSGLIPVAASR--AAAATKLSFYQSKLDNVWSSFDARWGCRHPNNTPAAAGDINPAYCTEIRVPTRTCAALIEEFGTPLMLKIDIEGRDTACLESLWGLPEERRPDYVSVENVTPAHVELLQGLGYGRQKVVDQRVIHDRYIGQAALVGNSGPFGEAAIDTVHGEGWASAEEVAARLPLPEQVGGVGV----WYDLHGKR 244          
BLAST of Gvermi12197.t1 vs. uniprot
Match: A0A1X6NK12_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK12_PORUM)

HSP 1 Score: 130 bits (326), Expect = 1.060e-29
Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 0
Query:  279 CTVMELETRTCSDLVREYGTPVYMKIDIEGKDRACLESLETLPESDRPKYASIENVTELDINILLRLGYKKFKVVNQNLLQ-EGTTDEEE--GHSGPWGEDADDAFVGKRWQTADELKKRLPLKNKMTLNGVERTAWYDLHGS 418
            C  + + T TC  L+R+YGTP  +K+DIEG+D  C+ SL+ L  S+RP YAS+ENVT   I +   LGY +FK V+Q +L  E   +  E  GHSGP+G++A DA  G+ WQ A  L  RLPL +   + G    AWYDLH +
Sbjct:    4 CRAVAVPTTTCDALIRDYGTPFMLKVDIEGQDTHCIASLKRLRRSERPPYASVENVTPDHIRLFTGLGYHRFKAVDQGVLHTEAAKNAPELLGHSGPFGDNATDAVTGRHWQPASTLTARLPLPSVNAVTGD--AAWYDLHAA 144          
BLAST of Gvermi12197.t1 vs. uniprot
Match: A0A3D1TZJ1_9CHLR (Methyltransf_21 domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D1TZJ1_9CHLR)

HSP 1 Score: 111 bits (277), Expect = 1.780e-24
Identity = 89/280 (31.79%), Postives = 129/280 (46.07%), Query Frame = 0
Query:  168 DGPCIFDIGHNNGQDTRNYLNEHPKSRVVAIEANPTLVADSKTKFADAIEQGRLQLVGIGITAIDPKKDKTEARPKLKFYVNK-NDKFSSFVESLGCRNWGGDVTPPGDRSFCTVMELETRTCSDLVREYGTPVYMKIDIEGKDRACLESLETLPESDRPKYASIENVTELDINILLRLGYKKFKVVNQNLLQEGTTDEEE-----------------------------GHSGPWGEDADDAFVGKRWQTADELKKRLPLKNKMTLNG-VERTAWYDLH 416
            D   IFDIG N+G+D+ +YL +    RV+A+EANP+L  + K KFA+ I +G + ++ +GI       D         F++N+ ND+ SSF    G R       P      CT M       S L++EYG P ++K+DIE  DR C+E+L  +   D P Y SIE      + +L  LGY+KFKVV+Q         + E                             G SGP+GE+     VG          + L +K K T  G ++ + W+D H
Sbjct:    4 DDRLIFDIGANHGEDSEHYLAQG--YRVLAVEANPSLAGELKEKFANQIREGEMVILDVGIGPHPGALD---------FFINESNDEHSSFDAVAGQRGGRWHTIP----ILCTTM-------SALLKEYGVPYFLKVDIELADRVCIEALSPI---DLPAYVSIEAHDLSYLCVLWSLGYRKFKVVDQRGHNHPRVFDNETVRGRLAGKLEFYRRQVRNRSGRPQRFKPGSSGPFGEET----VGPWVDLETAAYEWLHVKTKHTHRGTLDPSGWFDFH 254          
BLAST of Gvermi12197.t1 vs. uniprot
Match: UPI001E3DE4A6 (FkbM family methyltransferase n=1 Tax=Xanthobacter autotrophicus TaxID=280 RepID=UPI001E3DE4A6)

HSP 1 Score: 107 bits (268), Expect = 5.230e-23
Identity = 73/198 (36.87%), Postives = 106/198 (53.54%), Query Frame = 0
Query:  160 YCEDTSRNDGPCIFDIGHNNGQDTRNYLNEHPKSRVVAIEANPTLVADSKTKFADAIEQGRLQLVGIGITAIDPKKDKTEARPKLKFYVN-KNDKFSSFVESLGCRNWGGDVTPPGDRSFCTVMELETRTCSDLVREYGTPVYMKIDIEGKDRACLESLETLPESDRPKYASIENVTELDINILLRLGYKKFKVVNQN 356
            + +   +++ P IFDIG N+G+D+  YL +    RVV IEANP L A  + +F + I  G+  L+ IGI + + +         L+FY N  ND +SSF    GCRN         D  F  ++ ++  T   L+ ++GTP YMKID+EG DR  L+ L+ +  S RP + S+E      I  L  LGY+ F V  QN
Sbjct:   29 HAKPPRKSEAPLIFDIGVNHGEDSEFYLAKG--FRVVGIEANPILCAKLQERFENEIASGQYNLLNIGIWSEEKE---------LEFYHNLDNDHWSSFDREYGCRN---------DTKF-EILNIKCTTIDRLLSDFGTPHYMKIDVEGADRIILKQLQHV--SARPNFISVEEYGFQAIVHLRELGYRFFYVAPQN 203          
BLAST of Gvermi12197.t1 vs. uniprot
Match: A0A6V8MVJ0_9DELT (Methyltransf_21 domain-containing protein n=2 Tax=Geomonas paludis TaxID=2740185 RepID=A0A6V8MVJ0_9DELT)

HSP 1 Score: 105 bits (261), Expect = 4.910e-22
Identity = 90/292 (30.82%), Postives = 138/292 (47.26%), Query Frame = 0
Query:  161 CEDTSRNDGPCIFDIGHNNGQDTRNYLNEHPKSRVVAIEANPTLVADSKTKFADAIEQGRLQLVGIGITAIDPKKDKTEARPKLKFYVN-KNDKFSSFVESLGCRNWGGDVTPPGDR--SFCTVMELETRTCSDLVREYGTPVYMKIDIEGKDRACLESLETLPESDRPKYASIE------NVTELDINILLRLGYKKFKVVNQ--NLLQEGTTDEEEGH----------SGPWGEDADDAFVGKRWQTADELKKRLPLKNKMTLNG----------VER-----TAWYDLH 416
            C+  ++ D   I D+G + G+D+  YL +     VVAIEANP LVA +KT  A+ +  GRL +  + I   + + D         F+VN K+D + +  +    RN         +R  S   V++++  T   +++++  P Y+KID+EG D  CLE L   PE  RP+Y SIE        T  ++++L RLGY+ FK+VNQ  N          EG           SGP+GE++   ++G   +T  + K+ L  +     NG           ER       WYD H
Sbjct:    2 CKGEAKVDKKLIIDVGMHVGKDSEFYLKKG--FNVVAIEANPVLVATAKTALAEYVTSGRLIIQNVAIAPYEGEID---------FFVNAKHDDWGTISKEFAERN---------ERLGSSSEVIKVKCTTFDKILQDFSVPYYLKIDVEGVDALCLEQLFASPE--RPQYISIEAGLTSFEETFNELSLLWRLGYRDFKIVNQAQNYAVRCPNPPVEGDYVDYRFDGLCSGPFGEESPGEWMGIE-ETFAKYKRLLLEQKYFGANGKFYNTIFHRVYERLKRAPAGWYDFH 270          
BLAST of Gvermi12197.t1 vs. uniprot
Match: R1BHP0_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BHP0_EMIHU)

HSP 1 Score: 105 bits (263), Expect = 1.260e-21
Identity = 72/200 (36.00%), Postives = 109/200 (54.50%), Query Frame = 0
Query:  165 SRNDGPCIFDIGHNNGQDTRNYLNEHPKSRVVAIEANPTLVADS--KTKFADAIEQGRLQLVGIGITAIDPKKDKTEARPKLKFYVNKN-DKFSSFVESLGCRNWGGDVTPPGDRSFCTVMELETRTCSDLVREYGTPVYMKIDIEGKDRACLESLETLPESDRPKYASIENVTELDINILLRLGYKKFKVVNQNLLQEG 361
            +R  G  +FDIG + G DT  +L++     VVA+EAN  L+++   +   A A    +L LV  GI        + E    L FYV+K    +S+F++S   R      TP         +++ T TC+ L+R+YG P+Y KIDIEG D+ C+ SL +L +   P+Y S E+   LD    +RLGY +FK+V+Q+L + G
Sbjct:  160 ARRRGRFVFDIGFHTGDDTLFFLSQG--FDVVAVEANHVLISEGMRRPSIALAARSEQLHLVNAGIV-------RNEHNRTLTFYVHKTVSAWSTFMDSASKRL--DQFTP---------LQVPTVTCAALIRKYGVPLYPKIDIEGADKWCIHSLTSLRKQQLPRYISTEDPLALDA--FVRLGYTRFKMVDQSLARRG 337          
BLAST of Gvermi12197.t1 vs. uniprot
Match: A0A258SEQ0_9SPHN (Methyltransf_21 domain-containing protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A258SEQ0_9SPHN)

HSP 1 Score: 103 bits (258), Expect = 1.720e-21
Identity = 93/288 (32.29%), Postives = 132/288 (45.83%), Query Frame = 0
Query:  172 IFDIGHNNGQDTRNYLNEHPKSRVVAIEANPTLVADSKTKFADAIEQGRLQLVGIGITAIDPKKDKTEARPKLKFYVNKNDKFSSFVESLGCRNWGGDVTPPGDRSFCTVMELETRTCSDLVREYGTPVYMKIDIEGKDRACLESLETLPESDRPKYASIEN------VTELDINILLRLGYKKFKVVNQN--LLQEGTTDEEEG----------HSGPWGEDADDAFVGKRWQTADELKKRL------------------PLKN---KMTLNGVER--TAWYDLHGS 418
            IFDIG + GQDT  YL +  K  VVA+EANP L   +  +FA AI   +L +V   I  +    D         FY+N  +K S  V     R+W       G  S  T++++ T + +DL   YGTP +MK+DIEG D+ C+ +L  +   DRP + SIE+       T  D+ +L + GY KFK++ Q+  +LQ   T   EG           SG +G +     +  RW + D+   R                    +KN   K  LN V    T WYD H +
Sbjct:   32 IFDIGMHEGQDTDFYLRKGFK--VVAVEANPALAESAARRFAGAIASAQLTIVNKAIADVPGTID---------FYIN--EKLS--VWGTASRDWMERNAKLGAPS--TMIQVPTMSMADLFSVYGTPYFMKVDIEGYDQLCIRAL--IDRDDRPDFTSIESHAWLYDETVADLELLRQAGYAKFKIIPQHDIMLQRPPTKSLEGLPIDYAFVSGSSGLFGRE-----LPGRWMSFDQTCARYRHIYRNVRMVGMHNGRFRDVKNRYVKAVLNRVFAGGTGWYDTHAT 295          
BLAST of Gvermi12197.t1 vs. uniprot
Match: A0A1I4DE41_9GAMM (Methyltransferase, FkbM family n=1 Tax=Azotobacter beijerinckii TaxID=170623 RepID=A0A1I4DE41_9GAMM)

HSP 1 Score: 102 bits (253), Expect = 5.380e-21
Identity = 87/286 (30.42%), Postives = 131/286 (45.80%), Query Frame = 0
Query:  172 IFDIGHNNGQDTRNYLNEHPKSRVVAIEANPTLVADSKTKFADAIEQGRLQLVGIGITAIDPKKDKTEARPKLKFYVNKNDKFSSFVESLGCRNWGGDVTPPGDRSFCTVMELETRTCSDLVREYGTPVYMKIDIEGKDRACLESLETLPESDRPKYASIENVTEL------DINILLRLGYKKFKVVNQNLLQEG----------TTDEEEGHSGPWGEDADDAFVGKR------------WQTA--DELK----KRLPLKNKMTLNGVERT----AWYDLHGSK 419
            IFD+G + G+D   Y       RVVA+EANP L    K +F++ I  G L L+   I          +      F++NK        +     +W       G  S    +++E+   S+++  YG P Y+KIDIEG D AC+  L+ L +  RPKY S+E+          ++N L +LGY KFK+VNQ   ++G          +   EEG SGP+G+D +  ++ KR            ++T   D L     KR+P      L+   RT    +WYD H  +
Sbjct:   10 IFDVGAHKGEDCDFYFKLG--YRVVAVEANPALAEHLKERFSEEINDGSLILLNKAIG---------DTEGTTSFFINKKRSVWGTTDP----HWVKRNKARGAES--EEIKVESTLLSNIINAYGCPHYLKIDIEGADMACVNGLKALKQ--RPKYISLESTMTSWLDLLNELNTLEKLGYTKFKLVNQKKHEDGKFRNRNGELISHSFEEGASGPFGDDLEGPWLTKRQAIRAYMPIFIRYKTVGVDSLPLKTIKRIPF-----LHHAYRTLCFDSWYDTHAMR 271          
BLAST of Gvermi12197.t1 vs. uniprot
Match: A0A1X6NN73_PORUM (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NN73_PORUM)

HSP 1 Score: 96.7 bits (239), Expect = 1.510e-20
Identity = 53/119 (44.54%), Postives = 71/119 (59.66%), Query Frame = 0
Query:  302 MKIDIEGKDRACLESLETLPESDRPKYASIENVTELDINILLRLGYKKFKVVNQNLLQEGTTDEEE--GHSGPWGEDADDAFVGKRWQTADELKKRLPLKNKM-TLNGVERTAWYDLHG 417
            MKIDIEG+D ACL+SL T+P + RP Y S+ENV E  I +L  LGY   K V+Q ++      + +  G+SGP+G+ A     G  W  A  +K  LPLK++  T  G+    WYDLHG
Sbjct:    1 MKIDIEGRDTACLDSLHTIPRTSRPTYVSVENVNEAHIALLAELGYTSQKAVDQQIIHARYMGQPDLLGNSGPFGDAAVHLSGGTEWVDAPTVKTLLPLKDRTATGEGI----WYDLHG 115          
The following BLAST results are available for this feature:
BLAST of Gvermi12197.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J134_9FLOR5.850e-19769.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PBS3_PORUM8.770e-5342.86Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NK12_PORUM1.060e-2946.15Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A3D1TZJ1_9CHLR1.780e-2431.79Methyltransf_21 domain-containing protein n=1 Tax=... [more]
UPI001E3DE4A65.230e-2336.87FkbM family methyltransferase n=1 Tax=Xanthobacter... [more]
A0A6V8MVJ0_9DELT4.910e-2230.82Methyltransf_21 domain-containing protein n=2 Tax=... [more]
R1BHP0_EMIHU1.260e-2136.00Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A258SEQ0_9SPHN1.720e-2132.29Methyltransf_21 domain-containing protein n=2 Tax=... [more]
A0A1I4DE41_9GAMM5.380e-2130.42Methyltransferase, FkbM family n=1 Tax=Azotobacter... [more]
A0A1X6NN73_PORUM1.510e-2044.54Uncharacterized protein n=2 Tax=Porphyra umbilical... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006342Methyltransferase FkbMTIGRFAMTIGR01444TIGR01444coord: 172..327
e-value: 5.4E-10
score: 37.8
IPR006342Methyltransferase FkbMPFAMPF05050Methyltransf_21coord: 174..332
e-value: 1.8E-6
score: 28.1
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 160..353
e-value: 6.6E-15
score: 57.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..419
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..70
NoneNo IPR availableTMHMMTMhelixcoord: 53..75
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 167..327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3811204..3812463 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12197.t1Gvermi12197.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3811204..3812463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12197.t1 ID=Gvermi12197.t1|Name=Gvermi12197.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=420bp
MPRAANVSFKFPTLPNPLKPPASDKMTLDSMYNPAATGVFQKAIRPSIRR
ERLVAITAFVAGFLVCHLFLTSGSAIESGLFDKQHSSKAYQQPVPQPNAY
QYPPPYAVHPHYVPQYPAPNFVAPPGQQSVATAAQLAQQPQPVSAAPPVS
LAPPAPSVKYCEDTSRNDGPCIFDIGHNNGQDTRNYLNEHPKSRVVAIEA
NPTLVADSKTKFADAIEQGRLQLVGIGITAIDPKKDKTEARPKLKFYVNK
NDKFSSFVESLGCRNWGGDVTPPGDRSFCTVMELETRTCSDLVREYGTPV
YMKIDIEGKDRACLESLETLPESDRPKYASIENVTELDINILLRLGYKKF
KVVNQNLLQEGTTDEEEGHSGPWGEDADDAFVGKRWQTADELKKRLPLKN
KMTLNGVERTAWYDLHGSK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006342FkbM_mtfrase
IPR029063SAM-dependent_MTases