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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 10224.XP_002738319.1 |
| Preferred name | ORC1 |
| PFAMs | AAA,BAH,Cdc6_C |
| Max annot lvl | 33208|Metazoa |
| KEGG ko | ko:K02603 |
| KEGG Pathway | ko04110,ko04111,ko04113,map04110,map04111,map04113 |
| KEGG Module | M00284 |
| GOs | GO:0000082,GO:0000083,GO:0000228,GO:0000278,GO:0000808,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005664,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006277,GO:0006355,GO:0006725,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010564,GO:0016020,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022402,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0042127,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045787,GO:0046483,GO:0048518,GO:0048522,GO:0048660,GO:0048661,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051726,GO:0060255,GO:0065007,GO:0070013,GO:0070316,GO:0070318,GO:0071704,GO:0071897,GO:0071944,GO:0080090,GO:0090068,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903047,GO:1903506,GO:2000112,GO:2001141 |
| Evalue | 2.91e-61 |
| EggNOG OGs | COG1474@1|root,KOG1514@2759|Eukaryota,39C03@33154|Opisthokonta,3BB7R@33208|Metazoa,3CT1J@33213|Bilateria |
| Description | DNA replication |
| COG category | L |
| BRITE | ko00000,ko00001,ko00002,ko03032,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12211.t1 ID=Gvermi12211.t1|Name=Gvermi12211.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=813bp MSSSEDIPDQTSLFLLPYNEIPHFVLTNPSHTSQKELQRKRYFDACDLKR KSTELLINGNVHDNHSGWFQLQLGDCVLLRPQENSLRPGVAKITAFFDSP SSPIGYARIQWFYRSEDLSKSPKEASGEDEVFETDHFDDIEVESIAGRCD ISSYEAWVNFNVGDGDAQVARDSIADCVNRGKKISSKVSKVLSQAVIDVE QLPHDYAQEHIPSRIENKRSERLDVKRRKSKETGVAKKAAGRSRHSTKEE ISDLTSIVPPEDPEHWHTVQNDTHERNGTDLDSDVESSYMDNYEGSSIRY YCRRFYDPRMHVFLPSKYEDETADPLEELAQKLEELGDDDFCPPDSLPAS SSDDSLRLEEDVANRTRSQKKRKLSKTGQKRLVLRRKKAASASQFALPTD SGTISSLPCRESQKKHVRDFLLAFINETGTDCKTAGSRCLYVSGVPGTGK TATVREIIRDLLDIRARGDISHFDVLEVNAMSLPDPNLVYSELYTALTGN RGVHPSQAAQLLEKKFANLPEEKENRRNKRGRVAVGSRKRESCIIVILDE MDVLMARKQKVLYDMLEWPTRKNARMAVIGIANTMDLPERMLPRLGSRLG LNRLSYPPYTSDQIRKILELTLDQSKVKYSSEALKFCAAKVGAVSGDVRR ALELCRRASECAEEQVGKIGKRNCICITIDHVNQAINAIAGGSRLRSLAQ LSLFEKLFLLTAVTLSRREGACALDSTNSVEAVVAKALRVHGQFPEHFSK SDIPSRHELQEACQRLSEQRFVLIEKSSVFLKSRVVVNVSADDCSFALRD CSLSKAILSLNF* back to topspliced messenger RNA >Gvermi12211.t1 ID=Gvermi12211.t1|Name=Gvermi12211.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2439bp|location=Sequence derived from alignment at ScGOVlb_3404:3856825..3859263- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGTCAAGTGAAGACATACCCGACCAAACTTCTTTGTTCCTACTTCC ATATAACGAAATTCCGCACTTTGTTCTAACAAACCCAAGCCATACTTCAC AAAAGGAGCTGCAGCGAAAGCGTTATTTTGATGCATGTGACTTGAAAAGG AAATCTACCGAGCTGCTTATCAATGGAAACGTCCATGACAATCATTCGGG CTGGTTTCAACTGCAACTTGGTGATTGTGTTCTCCTTCGACCTCAGGAAA ATTCCTTGAGGCCCGGCGTTGCCAAAATAACTGCTTTTTTTGACTCCCCG TCCAGTCCCATTGGGTATGCTCGAATCCAATGGTTTTATAGATCAGAAGA TCTCAGTAAGAGTCCGAAAGAAGCATCCGGCGAAGACGAAGTTTTTGAGA CGGACCACTTCGATGACATAGAGGTGGAGTCAATCGCTGGACGCTGTGAC ATTTCCTCCTATGAAGCATGGGTCAATTTTAACGTCGGTGACGGCGATGC TCAGGTTGCACGCGACTCAATCGCAGATTGTGTGAACAGAGGCAAAAAAA TTTCAAGTAAAGTTTCAAAAGTACTAAGCCAAGCAGTCATAGATGTAGAG CAGCTACCACATGACTATGCTCAAGAACACATCCCCTCCCGAATCGAAAA CAAAAGATCAGAGCGACTTGATGTGAAACGTAGGAAATCAAAGGAAACAG GTGTGGCAAAGAAAGCAGCTGGGAGGTCCCGGCATTCCACGAAGGAAGAA ATATCCGATCTCACATCTATTGTTCCACCTGAGGATCCGGAGCATTGGCA CACCGTCCAAAATGACACTCATGAGCGAAACGGCACAGACCTTGATTCCG ATGTTGAAAGTTCATACATGGACAACTACGAAGGAAGCTCGATTCGCTAC TATTGCAGGCGATTTTACGATCCCCGAATGCATGTATTTCTGCCGTCCAA ATATGAAGATGAGACGGCAGATCCCCTTGAAGAACTCGCACAAAAACTTG AAGAACTTGGGGATGATGATTTTTGCCCTCCCGACAGTTTGCCAGCTTCA AGCAGCGACGATAGTCTCAGATTAGAGGAAGACGTTGCCAACCGTACTCG AAGTCAAAAGAAGCGAAAACTGTCGAAAACGGGGCAAAAGCGTTTAGTTC TTCGCAGAAAGAAGGCCGCATCTGCTTCCCAGTTTGCTCTTCCCACCGAT TCGGGGACAATATCATCTCTGCCTTGTAGAGAGTCCCAGAAGAAGCACGT GAGAGATTTTTTGTTAGCATTTATCAATGAAACAGGTACTGATTGCAAAA CAGCTGGTTCGCGTTGCTTGTACGTAAGTGGCGTACCTGGAACTGGGAAG ACAGCAACGGTTCGAGAAATAATACGGGACCTATTGGATATTCGAGCACG TGGGGATATCTCCCATTTTGATGTGTTAGAAGTCAATGCTATGAGCTTGC CTGATCCTAATCTTGTTTACTCTGAGCTTTACACTGCTCTAACGGGAAAT CGTGGAGTCCATCCATCTCAAGCTGCTCAGCTACTCGAGAAGAAATTTGC AAATCTGCCGGAAGAGAAGGAGAATCGACGGAACAAACGTGGGAGGGTTG CGGTAGGCAGTCGGAAGCGAGAGTCTTGTATTATTGTTATTCTTGACGAG ATGGATGTGCTGATGGCTCGAAAACAGAAGGTGTTGTACGACATGCTCGA ATGGCCTACGCGGAAAAACGCTCGAATGGCTGTCATTGGTATTGCAAACA CTATGGATCTACCGGAGCGAATGCTTCCTCGGCTTGGTTCTCGATTGGGA TTGAACCGTCTTTCATACCCACCGTATACAAGTGATCAAATAAGGAAGAT TCTTGAACTAACTCTGGATCAGTCAAAAGTGAAGTACTCATCAGAGGCGC TTAAGTTTTGCGCAGCCAAAGTAGGTGCCGTATCCGGAGACGTGAGAAGA GCACTTGAATTGTGCAGGAGGGCATCAGAATGTGCAGAGGAGCAAGTTGG GAAAATCGGGAAGCGGAATTGCATTTGTATCACGATTGACCACGTCAATC AGGCGATTAACGCGATCGCAGGTGGTTCCAGGCTGAGGTCTTTAGCTCAA CTTTCTCTTTTCGAAAAGCTTTTCCTCCTAACGGCTGTAACGCTGTCGCG GAGGGAAGGGGCTTGTGCGCTAGATTCAACTAATTCGGTTGAAGCTGTGG TAGCAAAAGCATTAAGGGTGCACGGTCAGTTTCCGGAACATTTTAGTAAG TCTGATATCCCATCAAGACATGAGCTGCAGGAGGCATGCCAAAGGCTTTC CGAACAGAGATTTGTGTTAATCGAGAAGTCATCCGTTTTCCTTAAAAGCA GGGTCGTCGTGAACGTTTCCGCTGATGATTGTTCTTTCGCTCTTCGAGAC TGTTCGCTCTCCAAGGCGATATTGTCCCTCAACTTTTGA back to topprotein sequence of Gvermi12211.t1 >Gvermi12211.t1 ID=Gvermi12211.t1|Name=Gvermi12211.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=813bp
MSSSEDIPDQTSLFLLPYNEIPHFVLTNPSHTSQKELQRKRYFDACDLKR KSTELLINGNVHDNHSGWFQLQLGDCVLLRPQENSLRPGVAKITAFFDSP SSPIGYARIQWFYRSEDLSKSPKEASGEDEVFETDHFDDIEVESIAGRCD ISSYEAWVNFNVGDGDAQVARDSIADCVNRGKKISSKVSKVLSQAVIDVE QLPHDYAQEHIPSRIENKRSERLDVKRRKSKETGVAKKAAGRSRHSTKEE ISDLTSIVPPEDPEHWHTVQNDTHERNGTDLDSDVESSYMDNYEGSSIRY YCRRFYDPRMHVFLPSKYEDETADPLEELAQKLEELGDDDFCPPDSLPAS SSDDSLRLEEDVANRTRSQKKRKLSKTGQKRLVLRRKKAASASQFALPTD SGTISSLPCRESQKKHVRDFLLAFINETGTDCKTAGSRCLYVSGVPGTGK TATVREIIRDLLDIRARGDISHFDVLEVNAMSLPDPNLVYSELYTALTGN RGVHPSQAAQLLEKKFANLPEEKENRRNKRGRVAVGSRKRESCIIVILDE MDVLMARKQKVLYDMLEWPTRKNARMAVIGIANTMDLPERMLPRLGSRLG LNRLSYPPYTSDQIRKILELTLDQSKVKYSSEALKFCAAKVGAVSGDVRR ALELCRRASECAEEQVGKIGKRNCICITIDHVNQAINAIAGGSRLRSLAQ LSLFEKLFLLTAVTLSRREGACALDSTNSVEAVVAKALRVHGQFPEHFSK SDIPSRHELQEACQRLSEQRFVLIEKSSVFLKSRVVVNVSADDCSFALRD CSLSKAILSLNF* back to topmRNA from alignment at ScGOVlb_3404:3856825..3859263- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12211.t1 ID=Gvermi12211.t1|Name=Gvermi12211.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2439bp|location=Sequence derived from alignment at ScGOVlb_3404:3856825..3859263- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCGTCAAGTGAAGACATACCCGACCAAACTTCTTTGTTCCTACTTCC
ATATAACGAAATTCCGCACTTTGTTCTAACAAACCCAAGCCATACTTCAC
AAAAGGAGCTGCAGCGAAAGCGTTATTTTGATGCATGTGACTTGAAAAGG
AAATCTACCGAGCTGCTTATCAATGGAAACGTCCATGACAATCATTCGGG
CTGGTTTCAACTGCAACTTGGTGATTGTGTTCTCCTTCGACCTCAGGAAA
ATTCCTTGAGGCCCGGCGTTGCCAAAATAACTGCTTTTTTTGACTCCCCG
TCCAGTCCCATTGGGTATGCTCGAATCCAATGGTTTTATAGATCAGAAGA
TCTCAGTAAGAGTCCGAAAGAAGCATCCGGCGAAGACGAAGTTTTTGAGA
CGGACCACTTCGATGACATAGAGGTGGAGTCAATCGCTGGACGCTGTGAC
ATTTCCTCCTATGAAGCATGGGTCAATTTTAACGTCGGTGACGGCGATGC
TCAGGTTGCACGCGACTCAATCGCAGATTGTGTGAACAGAGGCAAAAAAA
TTTCAAGTAAAGTTTCAAAAGTACTAAGCCAAGCAGTCATAGATGTAGAG
CAGCTACCACATGACTATGCTCAAGAACACATCCCCTCCCGAATCGAAAA
CAAAAGATCAGAGCGACTTGATGTGAAACGTAGGAAATCAAAGGAAACAG
GTGTGGCAAAGAAAGCAGCTGGGAGGTCCCGGCATTCCACGAAGGAAGAA
ATATCCGATCTCACATCTATTGTTCCACCTGAGGATCCGGAGCATTGGCA
CACCGTCCAAAATGACACTCATGAGCGAAACGGCACAGACCTTGATTCCG
ATGTTGAAAGTTCATACATGGACAACTACGAAGGAAGCTCGATTCGCTAC
TATTGCAGGCGATTTTACGATCCCCGAATGCATGTATTTCTGCCGTCCAA
ATATGAAGATGAGACGGCAGATCCCCTTGAAGAACTCGCACAAAAACTTG
AAGAACTTGGGGATGATGATTTTTGCCCTCCCGACAGTTTGCCAGCTTCA
AGCAGCGACGATAGTCTCAGATTAGAGGAAGACGTTGCCAACCGTACTCG
AAGTCAAAAGAAGCGAAAACTGTCGAAAACGGGGCAAAAGCGTTTAGTTC
TTCGCAGAAAGAAGGCCGCATCTGCTTCCCAGTTTGCTCTTCCCACCGAT
TCGGGGACAATATCATCTCTGCCTTGTAGAGAGTCCCAGAAGAAGCACGT
GAGAGATTTTTTGTTAGCATTTATCAATGAAACAGGTACTGATTGCAAAA
CAGCTGGTTCGCGTTGCTTGTACGTAAGTGGCGTACCTGGAACTGGGAAG
ACAGCAACGGTTCGAGAAATAATACGGGACCTATTGGATATTCGAGCACG
TGGGGATATCTCCCATTTTGATGTGTTAGAAGTCAATGCTATGAGCTTGC
CTGATCCTAATCTTGTTTACTCTGAGCTTTACACTGCTCTAACGGGAAAT
CGTGGAGTCCATCCATCTCAAGCTGCTCAGCTACTCGAGAAGAAATTTGC
AAATCTGCCGGAAGAGAAGGAGAATCGACGGAACAAACGTGGGAGGGTTG
CGGTAGGCAGTCGGAAGCGAGAGTCTTGTATTATTGTTATTCTTGACGAG
ATGGATGTGCTGATGGCTCGAAAACAGAAGGTGTTGTACGACATGCTCGA
ATGGCCTACGCGGAAAAACGCTCGAATGGCTGTCATTGGTATTGCAAACA
CTATGGATCTACCGGAGCGAATGCTTCCTCGGCTTGGTTCTCGATTGGGA
TTGAACCGTCTTTCATACCCACCGTATACAAGTGATCAAATAAGGAAGAT
TCTTGAACTAACTCTGGATCAGTCAAAAGTGAAGTACTCATCAGAGGCGC
TTAAGTTTTGCGCAGCCAAAGTAGGTGCCGTATCCGGAGACGTGAGAAGA
GCACTTGAATTGTGCAGGAGGGCATCAGAATGTGCAGAGGAGCAAGTTGG
GAAAATCGGGAAGCGGAATTGCATTTGTATCACGATTGACCACGTCAATC
AGGCGATTAACGCGATCGCAGGTGGTTCCAGGCTGAGGTCTTTAGCTCAA
CTTTCTCTTTTCGAAAAGCTTTTCCTCCTAACGGCTGTAACGCTGTCGCG
GAGGGAAGGGGCTTGTGCGCTAGATTCAACTAATTCGGTTGAAGCTGTGG
TAGCAAAAGCATTAAGGGTGCACGGTCAGTTTCCGGAACATTTTAGTAAG
TCTGATATCCCATCAAGACATGAGCTGCAGGAGGCATGCCAAAGGCTTTC
CGAACAGAGATTTGTGTTAATCGAGAAGTCATCCGTTTTCCTTAAAAGCA
GGGTCGTCGTGAACGTTTCCGCTGATGATTGTTCTTTCGCTCTTCGAGAC
TGTTCGCTCTCCAAGGCGATATTGTCCCTCAACTTTTGA back to topCoding sequence (CDS) from alignment at ScGOVlb_3404:3856825..3859263- >Gvermi12211.t1 ID=Gvermi12211.t1|Name=Gvermi12211.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2439bp|location=Sequence derived from alignment at ScGOVlb_3404:3856825..3859263- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCGTCAAGTGAAGACATACCCGACCAAACTTCTTTGTTCCTACTTCC ATATAACGAAATTCCGCACTTTGTTCTAACAAACCCAAGCCATACTTCAC AAAAGGAGCTGCAGCGAAAGCGTTATTTTGATGCATGTGACTTGAAAAGG AAATCTACCGAGCTGCTTATCAATGGAAACGTCCATGACAATCATTCGGG CTGGTTTCAACTGCAACTTGGTGATTGTGTTCTCCTTCGACCTCAGGAAA ATTCCTTGAGGCCCGGCGTTGCCAAAATAACTGCTTTTTTTGACTCCCCG TCCAGTCCCATTGGGTATGCTCGAATCCAATGGTTTTATAGATCAGAAGA TCTCAGTAAGAGTCCGAAAGAAGCATCCGGCGAAGACGAAGTTTTTGAGA CGGACCACTTCGATGACATAGAGGTGGAGTCAATCGCTGGACGCTGTGAC ATTTCCTCCTATGAAGCATGGGTCAATTTTAACGTCGGTGACGGCGATGC TCAGGTTGCACGCGACTCAATCGCAGATTGTGTGAACAGAGGCAAAAAAA TTTCAAGTAAAGTTTCAAAAGTACTAAGCCAAGCAGTCATAGATGTAGAG CAGCTACCACATGACTATGCTCAAGAACACATCCCCTCCCGAATCGAAAA CAAAAGATCAGAGCGACTTGATGTGAAACGTAGGAAATCAAAGGAAACAG GTGTGGCAAAGAAAGCAGCTGGGAGGTCCCGGCATTCCACGAAGGAAGAA ATATCCGATCTCACATCTATTGTTCCACCTGAGGATCCGGAGCATTGGCA CACCGTCCAAAATGACACTCATGAGCGAAACGGCACAGACCTTGATTCCG ATGTTGAAAGTTCATACATGGACAACTACGAAGGAAGCTCGATTCGCTAC TATTGCAGGCGATTTTACGATCCCCGAATGCATGTATTTCTGCCGTCCAA ATATGAAGATGAGACGGCAGATCCCCTTGAAGAACTCGCACAAAAACTTG AAGAACTTGGGGATGATGATTTTTGCCCTCCCGACAGTTTGCCAGCTTCA AGCAGCGACGATAGTCTCAGATTAGAGGAAGACGTTGCCAACCGTACTCG AAGTCAAAAGAAGCGAAAACTGTCGAAAACGGGGCAAAAGCGTTTAGTTC TTCGCAGAAAGAAGGCCGCATCTGCTTCCCAGTTTGCTCTTCCCACCGAT TCGGGGACAATATCATCTCTGCCTTGTAGAGAGTCCCAGAAGAAGCACGT GAGAGATTTTTTGTTAGCATTTATCAATGAAACAGGTACTGATTGCAAAA CAGCTGGTTCGCGTTGCTTGTACGTAAGTGGCGTACCTGGAACTGGGAAG ACAGCAACGGTTCGAGAAATAATACGGGACCTATTGGATATTCGAGCACG TGGGGATATCTCCCATTTTGATGTGTTAGAAGTCAATGCTATGAGCTTGC CTGATCCTAATCTTGTTTACTCTGAGCTTTACACTGCTCTAACGGGAAAT CGTGGAGTCCATCCATCTCAAGCTGCTCAGCTACTCGAGAAGAAATTTGC AAATCTGCCGGAAGAGAAGGAGAATCGACGGAACAAACGTGGGAGGGTTG CGGTAGGCAGTCGGAAGCGAGAGTCTTGTATTATTGTTATTCTTGACGAG ATGGATGTGCTGATGGCTCGAAAACAGAAGGTGTTGTACGACATGCTCGA ATGGCCTACGCGGAAAAACGCTCGAATGGCTGTCATTGGTATTGCAAACA CTATGGATCTACCGGAGCGAATGCTTCCTCGGCTTGGTTCTCGATTGGGA TTGAACCGTCTTTCATACCCACCGTATACAAGTGATCAAATAAGGAAGAT TCTTGAACTAACTCTGGATCAGTCAAAAGTGAAGTACTCATCAGAGGCGC TTAAGTTTTGCGCAGCCAAAGTAGGTGCCGTATCCGGAGACGTGAGAAGA GCACTTGAATTGTGCAGGAGGGCATCAGAATGTGCAGAGGAGCAAGTTGG GAAAATCGGGAAGCGGAATTGCATTTGTATCACGATTGACCACGTCAATC AGGCGATTAACGCGATCGCAGGTGGTTCCAGGCTGAGGTCTTTAGCTCAA CTTTCTCTTTTCGAAAAGCTTTTCCTCCTAACGGCTGTAACGCTGTCGCG GAGGGAAGGGGCTTGTGCGCTAGATTCAACTAATTCGGTTGAAGCTGTGG TAGCAAAAGCATTAAGGGTGCACGGTCAGTTTCCGGAACATTTTAGTAAG TCTGATATCCCATCAAGACATGAGCTGCAGGAGGCATGCCAAAGGCTTTC CGAACAGAGATTTGTGTTAATCGAGAAGTCATCCGTTTTCCTTAAAAGCA GGGTCGTCGTGAACGTTTCCGCTGATGATTGTTCTTTCGCTCTTCGAGAC TGTTCGCTCTCCAAGGCGATATTGTCCCTCAACTTTTGA back to top
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