Gvermi12331.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12331.t1
Unique NameGvermi12331.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length184
Homology
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BLAST of Gvermi12331.t1 vs. uniprot
Match: A0A2V3IKE3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKE3_9FLOR)

HSP 1 Score: 189 bits (481), Expect = 1.720e-58
Identity = 85/147 (57.82%), Postives = 112/147 (76.19%), Query Frame = 0 
Query:    1 MGVHELIRVSLYALEWIWTTVILIIFPVRLAKTAPTINNTIENICLFNASVGRSRCEYGLIWSVIGLIILTSTIVWYGVEYCTRFRLPERAEMLIFSWLAIWWLVGSITFTVTKSSRAPAIATIPVVFAWMLFVFCLISVLVASRGP 147
            MG  E  R+ LY +EWIWTTVI+ IFP +L   APT+N T E++CLFNA+VG SRC+YG+ W+ +G +ILT TI+WY ++YC+   LP   E+++F+WLA+WW VGSIT T TKSSRAP+ + +PV FAWML  FC+IS  +ASRGP
Sbjct:    1 MGRLECCRIILYVIEWIWTTVIMGIFPNQLKIEAPTVNGTFEDVCLFNANVGTSRCQYGVAWATVGWVILTITIIWYFLDYCSSVFLPANVEIIMFTWLALWWFVGSITLTATKSSRAPSPSNVPVAFAWMLVFFCIISAYIASRGP 147
[Close]
BLAST of Gvermi12331.t1 vs. uniprot
Match: A0A2V3II13_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II13_9FLOR)

HSP 1 Score: 109 bits (272), Expect = 6.140e-28
Identity = 50/71 (70.42%), Postives = 58/71 (81.69%), Query Frame = 0 
Query:   80 EYCTRFRLPERAEMLIFSWLAIWWLVGSITFTVTKSSRAPAIATIPVVFAWMLFVFCLISVLVASRGPIIK 150
            EYC++ RLPER EMLIF WL +WWLVGSI  T+ KSSRAP+IA +PVV AW+LF  CLIS LVASRGP +K
Sbjct:    2 EYCSKVRLPERTEMLIFLWLGLWWLVGSIALTIVKSSRAPSIAVVPVVLAWILFALCLISALVASRGPTLK 72
The following BLAST results are available for this feature:
BLAST of Gvermi12331.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IKE3_9FLOR1.720e-5857.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II13_9FLOR6.140e-2870.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..183
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..183
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..144
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..59
NoneNo IPR availableTMHMMTMhelixcoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 94..111
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4243223..4243947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12331.t1Gvermi12331.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4243223..4243947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12331.t1 ID=Gvermi12331.t1|Name=Gvermi12331.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=184bp
MGVHELIRVSLYALEWIWTTVILIIFPVRLAKTAPTINNTIENICLFNAS
VGRSRCEYGLIWSVIGLIILTSTIVWYGVEYCTRFRLPERAEMLIFSWLA
IWWLVGSITFTVTKSSRAPAIATIPVVFAWMLFVFCLISVLVASRGPIIK
MPSRSQQAQIQDPESVDETTLSQLHHPQQDRVP*
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