Gvermi4392.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4392.t1
Unique NameGvermi4392.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length423
Homology
BLAST of Gvermi4392.t1 vs. uniprot
Match: A0A2V3J1P6_9FLOR (Tryptophan synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1P6_9FLOR)

HSP 1 Score: 748 bits (1932), Expect = 8.240e-271
Identity = 358/421 (85.04%), Postives = 400/421 (95.01%), Query Frame = 0
Query:    1 MVAIDYASIKDTVFNPDVPNERGRFGRFGGQYVPETLMACLEELAARYQEIKNDPSFHEELDALMRDYVGRPSPLYFAERLTSRYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLAKRLGKTRIIAETGAGQHGVATATVCARFGLKCIVYMGAKDMDRQALNVFRMRLLGAEVRPVSAGTATLTDALSEAIRDWVTYPIETHYIVGSVAGPHPYPMLVRDFQAVIGRETREQAMQKWGGKPDILLACVGGGSNAMGLFSDFRSDEDVRLIGVEAAGKGLQTEEHAATLAKGSLGVLHGSMSYQLQDEHGMPAEAHSISAGLDYPGVGPEHSYLRDTKRAEYYSVSDDEALDAFKLLSRVEGIIPALETSHAIAYLDKLCPTLDGSPRIVVNCSGRGDKDVTAVVEYLKQRGDTDLQ 421
            MVA+D +++ D+ F+P+VP+ERGRFGRFGGQYVPETLM CLEEL   Y +IK+DP F EEL+ L+ DYVGRP+PLY+AERL++RYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLA+RLGKTRIIAETGAGQHGVATATVCARFG+KCIVYMGAKDM+RQALNVFRMRLLGAEVRPV++G+ TLT+ALSEAIRDWVTYPIETHYIVGSVAGPHPYPM+VRDFQA IG+E REQ+M KWGGKPDILLACVGGGSNAMGLFSDFR+D DVRLIGVEAAGKGL+TEEHAATL KG+LGVLHG+MSYQLQD+HGMP+EAHSISAGLDYPGVGPEHSY+RDTKRAEY SV+DDEALDAFKLLSR+EGIIPALETSHAIAYLDKLC +L+GSP+IV+NCSGRGDKDVTAVVEYLK+RGD D++
Sbjct:   40 MVAVDPSTLIDSEFDPNVPSERGRFGRFGGQYVPETLMVCLEELYENYLKIKDDPIFQEELNGLLTDYVGRPTPLYYAERLSARYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLARRLGKTRIIAETGAGQHGVATATVCARFGMKCIVYMGAKDMERQALNVFRMRLLGAEVRPVTSGSGTLTNALSEAIRDWVTYPIETHYIVGSVAGPHPYPMMVRDFQACIGKEVREQSMAKWGGKPDILLACVGGGSNAMGLFSDFRNDTDVRLIGVEAAGKGLETEEHAATLTKGTLGVLHGAMSYQLQDKHGMPSEAHSISAGLDYPGVGPEHSYMRDTKRAEYVSVTDDEALDAFKLLSRIEGIIPALETSHAIAYLDKLCASLEGSPKIVINCSGRGDKDVTAVVEYLKKRGDDDIE 460          
BLAST of Gvermi4392.t1 vs. uniprot
Match: A0A7S1ERF0_9RHOD (Tryptophan synthase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERF0_9RHOD)

HSP 1 Score: 669 bits (1725), Expect = 1.670e-238
Identity = 325/422 (77.01%), Postives = 368/422 (87.20%), Query Frame = 0
Query:    1 MVAIDYASIKDTVFNPDVPNERGRFGRFGGQYVPETLMACLEELAARYQEIKNDPSFHEELDALMRDYVGRPSPLYFAERLTSRYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLAKRLGKTRIIAETGAGQHGVATATVCARFGLKCIVYMGAKDMDRQALNVFRMRLLGAEVRPVSAGTATLTDALSEAIRDWVTYPIETHYIVGSVAGPHPYPMLVRDFQAVIGRETREQAMQKWGGKPDILLACVGGGSNAMGLFSDFRSDEDVRLIGVEAAGKGLQTEEHAATLAKGSLGVLHGSMSYQLQDEHGMPAEAHSISAGLDYPGVGPEHSYLRDTKRAEYYSVSDDEALDAFKLLSRVEGIIPALETSHAIAYLDKLCPTLDGSPRIVVNCSGRGDKDVTAVVEYLKQRGDTDLQL 422
            MV  D +S  +  +N  VP++ GRFGRFGG+YVPETLM CL++L A Y  IK DP+F +EL+ L+RDYVGRPSPLYFAERLT RYAR DGSGP+IYLKREDLNHTGAHKINNSLAQ+LLAKR+GKTRIIAETGAGQHGVATATVCARFG+KC+VYMGAKDM+RQ LNVFRMRLLGAEVRPV +G+ATLT+ALSEAIRDWVT+P ETHYIVGSVAGPHPYPMLVRDF   IGRETREQ++ KW   PDIL+ACVGGGSNAMGLF +FR+DE V+ IGVEAAG+G  +  +AAT+A G +GVLHGSMSYQLQD  GM  EAHSISAGLDYPGVGPEHSY++DT RA+Y SV+D EA++ FKLLSR+EGIIPALETSHAIAYL+KLCP L+GSP IV+NCSGRGDKDV  VVEYLK  GDTDL L
Sbjct:   90 MVVEDPSSTTER-YNSQVPDDLGRFGRFGGRYVPETLMGCLDDLCAEYDRIKQDPTFWDELNGLLRDYVGRPSPLYFAERLTERYARPDGSGPKIYLKREDLNHTGAHKINNSLAQILLAKRMGKTRIIAETGAGQHGVATATVCARFGMKCVVYMGAKDMERQKLNVFRMRLLGAEVRPVHSGSATLTNALSEAIRDWVTFPEETHYIVGSVAGPHPYPMLVRDFHNCIGRETREQSLAKWNALPDILIACVGGGSNAMGLFHEFRNDESVQFIGVEAAGEGEDSPRNAATMANGKIGVLHGSMSYQLQDTDGMILEAHSISAGLDYPGVGPEHSYMKDTGRAKYVSVTDAEAMEGFKLLSRLEGIIPALETSHAIAYLEKLCPQLEGSPYIVLNCSGRGDKDVNTVVEYLKSVGDTDLIL 510          
BLAST of Gvermi4392.t1 vs. uniprot
Match: A0A7S0BE58_9RHOD (Tryptophan synthase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BE58_9RHOD)

HSP 1 Score: 655 bits (1690), Expect = 3.970e-234
Identity = 314/418 (75.12%), Postives = 365/418 (87.32%), Query Frame = 0
Query:    1 MVAIDYASIKDTVFNPDVPNERGRFGRFGGQYVPETLMACLEELAARYQEIKNDPSFHEELDALMRDYVGRPSPLYFAERLTSRYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLAKRLGKTRIIAETGAGQHGVATATVCARFGLKCIVYMGAKDMDRQALNVFRMRLLGAEVRPVSAGTATLTDALSEAIRDWVTYPIETHYIVGSVAGPHPYPMLVRDFQAVIGRETREQAMQKWGGKPDILLACVGGGSNAMGLFSDFRSDEDVRLIGVEAAGKGLQTEEHAATLAKGSLGVLHGSMSYQLQDEHGMPAEAHSISAGLDYPGVGPEHSYLRDTKRAEYYSVSDDEALDAFKLLSRVEGIIPALETSHAIAYLDKLCPTLDGSPRIVVNCSGRGDKDVTAVVEYLKQRGDT 418
            +V++        VF+ +VPNE GRFG FGG+YVPETLM  LEEL A +++ K DP F +ELDAL++DYVGR +PLYFAERL+ +Y R DG+GP+IYLKREDLNHTGAHKINNSL Q LLAKRLG+ +IIAETGAGQHGVATATVCARFGL CIVYMGA+D++RQ+LNVFRM+LLGAEVRPV++GTATLT+ALSEAIRDWVTYP  THYIVGSVAGPHPYPMLVRDFQ+VIG+ETR+QAM+++ G PDIL+ACVGGGSNAMGLF +F  DE VR+IGVEA+G+G+ T+ HAAT+ KG +GVLHGSMSY LQ   G   EAHSISAGLDYPGVGPEHSY++DT RAEYY VSDDEALD FKLLS++EGIIPALETSHAIAYLDKLCPTL+GSP IVV+CSGRGDKDV  V+EYLK +GD+
Sbjct:   31 IVSVATEETGSAVFSSNVPNEFGRFGDFGGRYVPETLMPALEELTAEWEKAKKDPEFQKELDALLKDYVGRETPLYFAERLSEKYKREDGTGPKIYLKREDLNHTGAHKINNSLGQALLAKRLGRKQIIAETGAGQHGVATATVCARFGLDCIVYMGARDIERQSLNVFRMKLLGAEVRPVTSGTATLTNALSEAIRDWVTYPETTHYIVGSVAGPHPYPMLVRDFQSVIGKETRKQAMERFNGTPDILVACVGGGSNAMGLFHEFVDDEHVRIIGVEASGEGVDTDRHAATMTKGRVGVLHGSMSYLLQSSEGQILEAHSISAGLDYPGVGPEHSYMKDTGRAEYYHVSDDEALDGFKLLSQLEGIIPALETSHAIAYLDKLCPTLEGSPNIVVSCSGRGDKDVNTVLEYLKAKGDS 448          
BLAST of Gvermi4392.t1 vs. uniprot
Match: A0A5J4Z3Z0_PORPP (Tryptophan synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3Z0_PORPP)

HSP 1 Score: 653 bits (1685), Expect = 7.900e-234
Identity = 312/411 (75.91%), Postives = 357/411 (86.86%), Query Frame = 0
Query:   10 KDTVFNPDVPNERGRFGRFGGQYVPETLMACLEELAARYQEIKNDPSFHEELDALMRDYVGRPSPLYFAERLTSRYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLAKRLGKTRIIAETGAGQHGVATATVCARFGLKCIVYMGAKDMDRQALNVFRMRLLGAEVRPVSAGTATLTDALSEAIRDWVTYPIETHYIVGSVAGPHPYPMLVRDFQAVIGRETREQAMQKWGGKPDILLACVGGGSNAMGLFSDFRSDEDVRLIGVEAAGKGLQTEEHAATLAKGSLGVLHGSMSYQLQDEHGMPAEAHSISAGLDYPGVGPEHSYLRDTKRAEYYSVSDDEALDAFKLLSRVEGIIPALETSHAIAYLDKLCPTLDGSPRIVVNCSGRGDKDVTAVVEYLKQRGDTDL 420
            K  V++P+VP+ RGRFG FGG YVPETLM  L++L   Y EIK DP F  ELD L++DYVGRPSPLYFA RLT  + RADG+GPQIYLKREDLNHTGAHKINNSLAQ+LLA+R+GKTRIIAETGAGQHGVATATVCARFG++CIVYMGAKDM+RQ LNVFRMRL+GAEVR V++GTATLT+ALSEAIRDWVT P +THYIVGSVAGPHPYPMLVRDF A IG+ETR QAM+KWGG PD LLACVGGGSNAMGLF +FR+D+ V+++GVEAAG+G+ +  +AATL  G +GVLHGSMSYQLQD  G   EAHSISAGLDYPGVGPEHSYLRD+ RAEYY+V+DDEALD FKLL+R+EGIIPALETSHAIA+L K CP L GSP++V+NCSGRGDKDV  VV+ L+ RGD  L
Sbjct:    9 KKVVYDPNVPDTRGRFGMFGGMYVPETLMGPLDDLQKAYNEIKKDPDFQAELDGLLKDYVGRPSPLYFAARLTEHFKRADGTGPQIYLKREDLNHTGAHKINNSLAQILLARRMGKTRIIAETGAGQHGVATATVCARFGMQCIVYMGAKDMERQKLNVFRMRLMGAEVRAVTSGTATLTNALSEAIRDWVTNPTDTHYIVGSVAGPHPYPMLVRDFHACIGKETRAQAMEKWGGLPDYLLACVGGGSNAMGLFHEFRNDKSVKMVGVEAAGEGVSSPRNAATLTNGQVGVLHGSMSYQLQDSDGQILEAHSISAGLDYPGVGPEHSYLRDSGRAEYYAVTDDEALDGFKLLARLEGIIPALETSHAIAFLSKWCPNLTGSPKVVLNCSGRGDKDVNTVVKELEARGDGSL 419          
BLAST of Gvermi4392.t1 vs. uniprot
Match: M2WSD6_GALSU (Tryptophan synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WSD6_GALSU)

HSP 1 Score: 649 bits (1673), Expect = 2.400e-229
Identity = 307/405 (75.80%), Postives = 358/405 (88.40%), Query Frame = 0
Query:   18 VPNERGRFGRFGGQYVPETLMACLEELAARYQEIKNDPSFHEELDALMRDYVGRPSPLYFAERLTSRYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLAKRLGKTRIIAETGAGQHGVATATVCARFGLKCIVYMGAKDMDRQALNVFRMRLLGAEVRPVSAGTATLTDALSEAIRDWVTYPIETHYIVGSVAGPHPYPMLVRDFQAVIGRETREQAMQKWGGKPDILLACVGGGSNAMGLFSDFRSDEDVRLIGVEAAGKGLQTEEHAATLAKGSLGVLHGSMSYQLQDEHGMPAEAHSISAGLDYPGVGPEHSYLRDTKRAEYYSVSDDEALDAFKLLSRVEGIIPALETSHAIAYLDKLCPTLDGSPRIVVNCSGRGDKDVTAVVEYLKQRGDTDLQL 422
            VP+  G FGR+GGQ+VPETL  CLE LA  + E +NDP FH+ELD L++D+VGRPSPLYFAE L+SRYAR DGSGP+IYLKREDLNHTGAHKINNSLAQ LLA++LGKTR+IAETGAGQHGVATATVCARFGLKC+VYMGAKDM RQ+LNVFRMRLLGAEVR V+AGT TLT+ALSEAIRDWVTYP ETHYIVGSV+GPHPYP++VR+FQ++IG+ET++QA +KWG  PDIL+ACVGGGSNAMGLF DF  D +VRLIGVEAAG+GL +++HAATL  G LGVLHG+MSY +QDE G   E HSISAGLDYPGVGPEH+YL+DT RAEY++V+D EA+  FKLLSR+EGIIPALET+HA+AYLDKLCPTL GSP IV+ CSGRGDKDV  V++YLK+ GD+D+ L
Sbjct:  185 VPDVHGHFGRYGGQFVPETLFFCLENLAKCFGETRNDPMFHKELDLLLKDFVGRPSPLYFAEHLSSRYARKDGSGPRIYLKREDLNHTGAHKINNSLAQCLLARKLGKTRVIAETGAGQHGVATATVCARFGLKCVVYMGAKDMKRQSLNVFRMRLLGAEVREVTAGTGTLTNALSEAIRDWVTYPEETHYIVGSVSGPHPYPLIVREFQSIIGKETKQQAKEKWGTSPDILIACVGGGSNAMGLFHDFVEDPNVRLIGVEAAGEGLGSQKHAATLTCGQLGVLHGAMSYVIQDEDGQIKEVHSISAGLDYPGVGPEHAYLKDTGRAEYFAVTDREAIQGFKLLSRMEGIIPALETAHAVAYLDKLCPTLSGSPNIVLCCSGRGDKDVHTVMDYLKENGDSDIHL 589          
BLAST of Gvermi4392.t1 vs. uniprot
Match: A0A1X6NQ25_PORUM (Tryptophan synthase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQ25_PORUM)

HSP 1 Score: 638 bits (1645), Expect = 1.330e-226
Identity = 307/420 (73.10%), Postives = 360/420 (85.71%), Query Frame = 0
Query:    1 MVAIDYASIKDTVFNPDVPNERGRFGRFGGQYVPETLMACLEELAARYQEIKNDPSFHEELDALMRDYVGRPSPLYFAERLTSRYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLAKRLGKTRIIAETGAGQHGVATATVCARFGLKCIVYMGAKDMDRQALNVFRMRLLGAEVRPVSAGTATLTDALSEAIRDWVTYPIETHYIVGSVAGPHPYPMLVRDFQAVIGRETREQAMQKWGGKPDILLACVGGGSNAMGLFSDFRSDEDVRLIGVEAAGKGLQTEEHAATLAKGSLGVLHGSMSYQLQDEHGMPAEAHSISAGLDYPGVGPEHSYLRDTKRAEYYSVSDDEALDAFKLLSRVEGIIPALETSHAIAYLDKLCPTLDGSPRIVVNCSGRGDKDVTAVVEYLKQRGDTDL 420
            + A +  +I DTV++  VP+ RGR+GRFGGQYVPETLM  LEEL A Y     DP+FHEE++ L++D+VGRP+PLYFAERLT  YARADGSGP+I+ KREDLNHTGAHKINNS+ Q +LAKRLGKTRIIAETGAGQHGVATATVCARFG++C VYMGA+DM+RQALNVFRMRLLGA V PV+AG  TL++ALSEAIRDWVT P+ETHYIVGSVAGPHPYP +VR   AVIG ETR QA+ K+GG PDIL+ACVGGGSNA+GLF +F+ D DVRLIGVEAAGKGL + EHAAT+++GSLGVLHGSMSYQLQDE G   E HS+SAGLDYP VGPEHS+++DT R EY SV+DDEALDAFKL SR+EGIIPALET+HA+A+LDKLCP ++G+P IV+N SGRGDKDV  VV+   +RGDTD+
Sbjct:   73 LTASEPQNIADTVYDATVPDARGRYGRFGGQYVPETLMFALEELEAGYAAAIADPAFHEEVNGLLKDFVGRPTPLYFAERLTQHYARADGSGPRIWFKREDLNHTGAHKINNSVMQAVLAKRLGKTRIIAETGAGQHGVATATVCARFGMECEVYMGAQDMERQALNVFRMRLLGARVIPVTAGAGTLSNALSEAIRDWVTRPVETHYIVGSVAGPHPYPYIVRQAHAVIGAETRGQAVAKFGGAPDILIACVGGGSNAIGLFHEFKGDADVRLIGVEAAGKGLDSGEHAATMSRGSLGVLHGSMSYQLQDEWGQLQETHSVSAGLDYPSVGPEHSFMKDTGRCEYVSVTDDEALDAFKLCSRLEGIIPALETAHALAHLDKLCPEVEGNPNIVINLSGRGDKDVNTVVKLFHERGDTDV 492          
BLAST of Gvermi4392.t1 vs. uniprot
Match: A0A8J6R227_9CYAN (Tryptophan synthase subunit beta n=3 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J6R227_9CYAN)

HSP 1 Score: 632 bits (1629), Expect = 4.560e-225
Identity = 303/411 (73.72%), Postives = 352/411 (85.64%), Query Frame = 0
Query:    3 AIDYASIKDTVFNPDVPNERGRFGRFGGQYVPETLMACLEELAARYQEIKNDPSFHEELDALMRDYVGRPSPLYFAERLTSRYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLAKRLGKTRIIAETGAGQHGVATATVCARFGLKCIVYMGAKDMDRQALNVFRMRLLGAEVRPVSAGTATLTDALSEAIRDWVTYPIETHYIVGSVAGPHPYPMLVRDFQAVIGRETREQAMQKWGGKPDILLACVGGGSNAMGLFSDFRSDEDVRLIGVEAAGKGLQTEEHAATLAKGSLGVLHGSMSYQLQDEHGMPAEAHSISAGLDYPGVGPEHSYLRDTKRAEYYSVSDDEALDAFKLLSRVEGIIPALETSHAIAYLDKLCPTLDGSPRIVVNCSGRGDKDVTAVVEYLK 413
            AID  ++ + + +   P+  GRFG+FGG+YVPETLM  L EL   + +  NDP F +EL  LMRDYVGRPSPLYFAERLT+RYAR DGS PQIYLKREDLNHTGAHKINNSLAQ LLAKR+GK RIIAETGAGQHGVATATVCARFGL+CI+YMG  DM+RQALNVFRMRL+GAEVRPV++GT TL DA SEAIRDWVT    THYI+GSVAGPHPYPM+VRDFQAVIG+ETR Q  +KWGG PDILLACVGGGSNAMGLF +F ++  VR+IG+EAAG+G+ TE+HAATL +G +GVLHG+MSY LQD+ G   E HSISAGLDYPGVGPEHSYL+D+ RAEYYS++D EAL+ F+L+S++EGIIPALETSHAIAYLD LCP L+GSPRIV+NCSGRGDKDV +V++YLK
Sbjct:   23 AID--NLAEVITSAQRPDALGRFGQFGGKYVPETLMPALSELETAFHQYCNDPEFQQELQGLMRDYVGRPSPLYFAERLTTRYARPDGSSPQIYLKREDLNHTGAHKINNSLAQALLAKRMGKQRIIAETGAGQHGVATATVCARFGLECIIYMGVHDMERQALNVFRMRLMGAEVRPVASGTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMIVRDFQAVIGQETRAQCQEKWGGLPDILLACVGGGSNAMGLFHEFVNEPSVRMIGIEAAGEGVDTEKHAATLTRGRVGVLHGAMSYLLQDQDGQVVEPHSISAGLDYPGVGPEHSYLKDSGRAEYYSITDAEALEGFQLISKLEGIIPALETSHAIAYLDYLCPQLEGSPRIVINCSGRGDKDVQSVIKYLK 431          
BLAST of Gvermi4392.t1 vs. uniprot
Match: TRPB2_NOSS1 (Tryptophan synthase beta chain 2 n=41 Tax=Nostocales TaxID=1161 RepID=TRPB2_NOSS1)

HSP 1 Score: 629 bits (1622), Expect = 2.200e-224
Identity = 303/401 (75.56%), Postives = 345/401 (86.03%), Query Frame = 0
Query:   12 TVFNPDVPNERGRFGRFGGQYVPETLMACLEELAARYQEIKNDPSFHEELDALMRDYVGRPSPLYFAERLTSRYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLAKRLGKTRIIAETGAGQHGVATATVCARFGLKCIVYMGAKDMDRQALNVFRMRLLGAEVRPVSAGTATLTDALSEAIRDWVTYPIETHYIVGSVAGPHPYPMLVRDFQAVIGRETREQAMQKWGGKPDILLACVGGGSNAMGLFSDFRSDEDVRLIGVEAAGKGLQTEEHAATLAKGSLGVLHGSMSYQLQDEHGMPAEAHSISAGLDYPGVGPEHSYLRDTKRAEYYSVSDDEALDAFKLLSRVEGIIPALETSHAIAYLDKLCPTLDGSPRIVVNCSGRGDKDVTAVVEYL 412
            T  N  VP+ +GRFGRFGG+YVPETLM  L EL   YQ+ +NDP F  EL  L+RDYVGR +PLYFAERLT+ YAR DG+G QIYLKREDLNHTGAHKINN+L QVLLAKR+GK RIIAETGAGQHGVATATVCARFGL+C++YMG  DM+RQALNVFRMRL+GAEVRPV+AGT TL DA SEAIRDWVT    THYI+GSVAGPHPYPM+VRDF AVIG+ETR QA++KWGG PDILLACVGGGSNAMGLF +F ++  ++LIGVEAAG+G+ TE+HAATL KG +GVLHG+MSY LQDE G   EAHSISAGLDYPGVGPEHSYL+D  RAEYYSV+D+EAL AF+ LSR+EGIIPALET+HAIAYL+ LCP LDGSPRIV+NCSGRGDKDV  V ++L
Sbjct:   10 TPSNVQVPDIQGRFGRFGGKYVPETLMPALAELETAYQQYRNDPGFQAELQQLLRDYVGRATPLYFAERLTAHYARPDGTGAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIAETGAGQHGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLMGAEVRPVAAGTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIKLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRAEYYSVTDEEALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIVINCSGRGDKDVQTVAKFL 410          
BLAST of Gvermi4392.t1 vs. uniprot
Match: TRPB_TRIV2 (Tryptophan synthase beta chain n=5 Tax=Nostocales TaxID=1161 RepID=TRPB_TRIV2)

HSP 1 Score: 626 bits (1615), Expect = 2.560e-223
Identity = 301/401 (75.06%), Postives = 344/401 (85.79%), Query Frame = 0
Query:   12 TVFNPDVPNERGRFGRFGGQYVPETLMACLEELAARYQEIKNDPSFHEELDALMRDYVGRPSPLYFAERLTSRYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLAKRLGKTRIIAETGAGQHGVATATVCARFGLKCIVYMGAKDMDRQALNVFRMRLLGAEVRPVSAGTATLTDALSEAIRDWVTYPIETHYIVGSVAGPHPYPMLVRDFQAVIGRETREQAMQKWGGKPDILLACVGGGSNAMGLFSDFRSDEDVRLIGVEAAGKGLQTEEHAATLAKGSLGVLHGSMSYQLQDEHGMPAEAHSISAGLDYPGVGPEHSYLRDTKRAEYYSVSDDEALDAFKLLSRVEGIIPALETSHAIAYLDKLCPTLDGSPRIVVNCSGRGDKDVTAVVEYL 412
            T  N  VP+ +GRFGRFGG+YVPETLM  L EL   YQ+ ++DP F  EL  L+RDYVGR +PLYFAERLT+ YAR DG+G QIYLKREDLNHTGAHKINN+L QVLLAKR+GK RIIAETGAGQHGVATATVCARFGL+C++YMG  DM+RQALNVFRMRL+GAEVRPV AGT TL DA SEAIRDWVT    THYI+GSVAGPHPYPM+VRDF AVIG+ETR QA++KWGG PDILLACVGGGSNAMGLF +F ++  +RLIGVEAAG+G+ TE+HAATL KG +GVLHG+MSY LQDE G   EAHSISAGLDYPGVGPEHSYL+D  RAEYYSV+D++AL AF+ LSR+EGIIPALET+HAIAYL+ LCP LDGSPRI++NCSGRGDKDV  V ++L
Sbjct:   10 TPSNAQVPDIQGRFGRFGGKYVPETLMPALAELETAYQKYRHDPGFQAELQQLLRDYVGRATPLYFAERLTAHYARPDGTGAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIAETGAGQHGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLMGAEVRPVEAGTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIRLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRAEYYSVTDEQALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIIINCSGRGDKDVQTVAKFL 410          
BLAST of Gvermi4392.t1 vs. uniprot
Match: UPI000349CF59 (tryptophan synthase subunit beta n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI000349CF59)

HSP 1 Score: 626 bits (1615), Expect = 2.960e-223
Identity = 302/394 (76.65%), Postives = 342/394 (86.80%), Query Frame = 0
Query:   19 PNERGRFGRFGGQYVPETLMACLEELAARYQEIKNDPSFHEELDALMRDYVGRPSPLYFAERLTSRYARADGSGPQIYLKREDLNHTGAHKINNSLAQVLLAKRLGKTRIIAETGAGQHGVATATVCARFGLKCIVYMGAKDMDRQALNVFRMRLLGAEVRPVSAGTATLTDALSEAIRDWVTYPIETHYIVGSVAGPHPYPMLVRDFQAVIGRETREQAMQKWGGKPDILLACVGGGSNAMGLFSDFRSDEDVRLIGVEAAGKGLQTEEHAATLAKGSLGVLHGSMSYQLQDEHGMPAEAHSISAGLDYPGVGPEHSYLRDTKRAEYYSVSDDEALDAFKLLSRVEGIIPALETSHAIAYLDKLCPTLDGSPRIVVNCSGRGDKDVTAVVEYL 412
            P+  GRFGRFGG+YVPETLM  L EL A YQ+ +NDP+F +EL  L+RDYVGRPSPLYFAERLT+ YAR DG+GPQIYLKREDLNHTGAHKINN+LAQ LLA R+GK RIIAETGAGQHGVATATVCARFGL+C++YMG  DMDRQALNVFRMRL+GAEVRPV+AGT TL DA SEAIRDWVT    THYI+GSVAGPHPYPM+VRDF AVIG+ETR QA++KWGG PDILLACVGGGSNAMGLF +F  +  VRLIGVEAAG+G+ TE+HAATL +G +GVLHG+MSY LQDE G   EAHSISAGLDYPGVGPEHSYL+D  RAEYYSV+D +AL+AF+ LS++EGIIPALET+HAIAYL+ LCP L GSPRIV+NCSGRGDKDV  V + L
Sbjct:   20 PDALGRFGRFGGKYVPETLMPALAELEAAYQQYRNDPAFGQELQQLLRDYVGRPSPLYFAERLTAHYARPDGTGPQIYLKREDLNHTGAHKINNALAQALLAVRMGKQRIIAETGAGQHGVATATVCARFGLQCVIYMGVHDMDRQALNVFRMRLMGAEVRPVAAGTGTLKDATSEAIRDWVTNVENTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGVPDILLACVGGGSNAMGLFHEFVGEPAVRLIGVEAAGEGVDTEKHAATLTQGRIGVLHGAMSYLLQDEDGQVVEAHSISAGLDYPGVGPEHSYLKDAGRAEYYSVTDKQALEAFQRLSQLEGIIPALETAHAIAYLETLCPQLAGSPRIVINCSGRGDKDVQTVAKLL 413          
The following BLAST results are available for this feature:
BLAST of Gvermi4392.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1P6_9FLOR8.240e-27185.04Tryptophan synthase n=1 Tax=Gracilariopsis chorda ... [more]
A0A7S1ERF0_9RHOD1.670e-23877.01Tryptophan synthase n=1 Tax=Timspurckia oligopyren... [more]
A0A7S0BE58_9RHOD3.970e-23475.12Tryptophan synthase n=1 Tax=Rhodosorus marinus Tax... [more]
A0A5J4Z3Z0_PORPP7.900e-23475.91Tryptophan synthase n=1 Tax=Porphyridium purpureum... [more]
M2WSD6_GALSU2.400e-22975.80Tryptophan synthase n=1 Tax=Galdieria sulphuraria ... [more]
A0A1X6NQ25_PORUM1.330e-22673.10Tryptophan synthase n=1 Tax=Porphyra umbilicalis T... [more]
A0A8J6R227_9CYAN4.560e-22573.72Tryptophan synthase subunit beta n=3 Tax=unclassif... [more]
TRPB2_NOSS12.200e-22475.56Tryptophan synthase beta chain 2 n=41 Tax=Nostocal... [more]
TRPB_TRIV22.560e-22375.06Tryptophan synthase beta chain n=5 Tax=Nostocales ... [more]
UPI000349CF592.960e-22376.65tryptophan synthase subunit beta n=1 Tax=Oscillato... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023026Tryptophan synthase beta chain/beta chain-likePIRSFPIRSF001413Trp_syn_betacoord: 6..418
e-value: 4.2E-159
score: 527.6
IPR023026Tryptophan synthase beta chain/beta chain-likeHAMAPMF_00133Trp_synth_betacoord: 18..412
score: 51.602337
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeGENE3D3.40.50.1100coord: 25..227
e-value: 4.5E-191
score: 636.6
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeGENE3D3.40.50.1100coord: 70..405
e-value: 4.5E-191
score: 636.6
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 19..412
IPR001926Pyridoxal-phosphate dependent enzymePFAMPF00291PALPcoord: 69..399
e-value: 8.0E-48
score: 163.3
IPR006654Tryptophan synthase, beta chainTIGRFAMTIGR00263TIGR00263coord: 23..411
e-value: 5.9E-180
score: 596.3
IPR006654Tryptophan synthase, beta chainCDDcd06446Trp-synth_Bcoord: 40..408
e-value: 0.0
score: 640.738
NoneNo IPR availablePIRSRPIRSR006278-2PIRSR006278-2coord: 93..280
e-value: 2.6E-11
score: 41.0
NoneNo IPR availablePANTHERPTHR48077:SF8TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATEDcoord: 17..413
NoneNo IPR availablePANTHERPTHR48077TRYPTOPHAN SYNTHASE-RELATEDcoord: 17..413
IPR006653Tryptophan synthase, beta chain, conserved sitePROSITEPS00168TRP_SYNTHASE_BETAcoord: 102..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1517160..1518428 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4392.t1Gvermi4392.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1517160..1518428 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4392.t1 ID=Gvermi4392.t1|Name=Gvermi4392.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=423bp
MVAIDYASIKDTVFNPDVPNERGRFGRFGGQYVPETLMACLEELAARYQE
IKNDPSFHEELDALMRDYVGRPSPLYFAERLTSRYARADGSGPQIYLKRE
DLNHTGAHKINNSLAQVLLAKRLGKTRIIAETGAGQHGVATATVCARFGL
KCIVYMGAKDMDRQALNVFRMRLLGAEVRPVSAGTATLTDALSEAIRDWV
TYPIETHYIVGSVAGPHPYPMLVRDFQAVIGRETREQAMQKWGGKPDILL
ACVGGGSNAMGLFSDFRSDEDVRLIGVEAAGKGLQTEEHAATLAKGSLGV
LHGSMSYQLQDEHGMPAEAHSISAGLDYPGVGPEHSYLRDTKRAEYYSVS
DDEALDAFKLLSRVEGIIPALETSHAIAYLDKLCPTLDGSPRIVVNCSGR
GDKDVTAVVEYLKQRGDTDLQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023026Trp_synth_beta/beta-like
IPR036052Trypto_synt_PLP_dependent
IPR001926PLP-dep
IPR006654Trp_synth_beta
IPR006653Trp_synth_b_CS