Gvermi12380.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12380.t1
Unique NameGvermi12380.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length190
Homology
BLAST of Gvermi12380.t1 vs. uniprot
Match: A0A2V3J426_9FLOR (PH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J426_9FLOR)

HSP 1 Score: 196 bits (497), Expect = 1.730e-60
Identity = 106/199 (53.27%), Postives = 134/199 (67.34%), Query Frame = 0
Query:    1 MEGFLAKRGKRSGSRVKRFMRLQGALLSNHHGPDDAPTWRVDVSDARVACNSHKKRISLEVFGNRLELFADSAADCERWFGALRAAARQA----ARDDRAAGKENSSPQLAA-----VDSDGAAAQQPALQRPLARTSDLGKNFKVVKPNPSQS-LASQSSNGSDEPADQSHHALTVNGQVYEETPASMIFKQFNFPPK 189
            MEGFLAKRGKR GSRVKR+MRL  A LSNHH P++ PTWRV++ DA ++CN+ K RI+++++GN+LEL+AD++ DC+ W+ AL A+  +A         A GKEN+ P         ++        P   R   R SDLGKNFKVVKP PS + + +QSS  SD+P D     L VNGQVYEETPASMIFKQFNFP K
Sbjct:    1 MEGFLAKRGKRMGSRVKRYMRLDAAFLSNHHTPNEPPTWRVNIKDAHISCNTKKNRITIDLYGNKLELYADTSHDCDLWYDALTASKAKANLSNPSSSHANGKENNQPSNQTHDPRLINMQSCDMPDPENNRSSKRASDLGKNFKVVKPQPSNNNVLAQSSAASDDPYD-GQQPLAVNGQVYEETPASMIFKQFNFPAK 198          
BLAST of Gvermi12380.t1 vs. uniprot
Match: R7QS02_CHOCR (PH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS02_CHOCR)

HSP 1 Score: 158 bits (399), Expect = 1.570e-45
Identity = 92/197 (46.70%), Postives = 131/197 (66.50%), Query Frame = 0
Query:    1 MEGFLAKRGKRSGSRVKRFMRLQGALLSNHHGPDDAPTWRVDVSDARVACNSHKKRISLEVFGNRLELFADSAADCERWFGALRAAARQAARDDRAAGKEN---SSPQLAA-VDSDGAAAQQPALQ----RPLARTSDLGKNFKVVKPNPSQSLASQSSNGSDEPADQSHHALTVNGQVYEETPASMIFKQFNFPPK 189
            MEG+L K+GKR GSRVKR+MRL GA+LSNHH     P+WRV+V DA +  ++ + ++++E++ N+LEL+A+SA +  +WF ALR A ++AA  D A   ++   +S  L A +D+  + +Q   ++    RP    + L  NFKVVKP  S++++S  S+GSDE  +     L V GQVYEETPASMIFKQF FP K
Sbjct:   14 MEGYLGKKGKRMGSRVKRYMRLDGAILSNHHAAGAPPSWRVNVKDAVIGHHAKRHKVTIELYNNKLELYAESARESSQWFDALRNAKKKAASRDAAPSNDSMPAASVDLPADIDASRSRSQADPVEDRQDRPANARAHLSNNFKVVKP-ASRNVSSTDSSGSDEAYEGG--PLVVQGQVYEETPASMIFKQFTFPAK 207          
BLAST of Gvermi12380.t1 vs. uniprot
Match: A0A5J4YT70_PORPP (Myosin light chain kinase A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT70_PORPP)

HSP 1 Score: 67.4 bits (163), Expect = 7.890e-10
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:    1 MEGFLAKRGKRSGSRVKRFMRLQGALLSNHHGPDDAPTWRVDVSDARVACNSHKKRISLEVFGNRLELFADSAADCERWFGALRAAARQAARDDRAAGKE 100
            +EG+L K GK +  +V+RF+RL GA+LS+H      P+W   V + +V   +   ++ +E+   +LELFA S+ + E W  A   A+ Q+ +     GKE
Sbjct:   39 LEGYLMKAGKATKMKVRRFLRLHGAVLSSHKDQGAPPSWEKSVLECKVYAGTKPGQLFVEMADRKLELFASSSEEQEAWVRAFEDASNQSIKKHYMFGKE 138          
BLAST of Gvermi12380.t1 vs. uniprot
Match: A0A7S0T7G0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7G0_9RHOD)

HSP 1 Score: 65.9 bits (159), Expect = 2.750e-9
Identity = 31/93 (33.33%), Postives = 53/93 (56.99%), Query Frame = 0
Query:    1 MEGFLAKRGKRSGSRVKRFMRLQGALLSNHHGPDDAPTWRVDVSDARVACNSHKKRISLEVFGNRLELFADSAADCERWFGALRAAARQAARD 93
            M G++ K GK   S+V+RF++L+G++LSNHH  +   +W V V +  V   S    + + + G +   FA +  +  RW  AL++AA ++  D
Sbjct:   12 MSGWVYKEGKFLRSKVRRFLKLRGSMLSNHHSDNSPASWEVSVLECPVCAGSRANELVIHLPGRKTSFFAANEREYSRWMEALKSAACRSVND 104          
BLAST of Gvermi12380.t1 vs. uniprot
Match: A0A5J4YUJ5_PORPP (Putative myosin light chain kinase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUJ5_PORPP)

HSP 1 Score: 63.9 bits (154), Expect = 1.280e-8
Identity = 31/92 (33.70%), Postives = 53/92 (57.61%), Query Frame = 0
Query:    2 EGFLAKRGKRSGSRVKRFMRLQGALLSNHHGPDDAPTWRVDVSDARVACNSHKKRISLEVFGNRLELFADSAADCERWFGALRAAARQAARD 93
            +G+L K G+   S+ +RF+RL+G +LSNHH  +   TW V V D  V   +    + +++   R+ LFA++  +  RW  AL+ A+ ++  D
Sbjct:   58 QGWLYKEGRVLRSKHRRFLRLKGTILSNHHAENAPATWEVSVLDCPVRAGAKHNELVIQLPSRRVSLFAENDREFNRWVQALKTASSRSIDD 149          
BLAST of Gvermi12380.t1 vs. uniprot
Match: A0A1X6NZW0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZW0_PORUM)

HSP 1 Score: 60.8 bits (146), Expect = 1.730e-7
Identity = 31/94 (32.98%), Postives = 50/94 (53.19%), Query Frame = 0
Query:    1 MEGFLAKRGKRS-GSRVKRFMRLQGALLSNHHGPDDAPTWRVDVSDARVACNSHKKRISLEVFGNRLELFADSAADCERWFGALRAAARQAARD 93
            M+G+L K GK    SR +R+ RL+G +LSNHH P    +W   V    V   + +  + + +   ++  FA++A D   W  ALR A+ ++  D
Sbjct:   12 MDGWLFKEGKSFLRSRTRRYFRLKGTVLSNHHSPGSPASWEASVISCPVTAGAREHELVVALPTRQMSFFAETATDFAAWVDALRTASARSLED 105          
BLAST of Gvermi12380.t1 vs. uniprot
Match: A0A7S1ET06_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET06_9RHOD)

HSP 1 Score: 56.6 bits (135), Expect = 1.090e-6
Identity = 25/93 (26.88%), Postives = 52/93 (55.91%), Query Frame = 0
Query:    1 MEGFLAKRGKRSGSRVKRFMRLQGALLSNHHGPDDAPTWRVDVSDARVACNSHKKRISLEVFGNRLELFADSAADCERWFGALRAAARQAARD 93
            + G++ K G+   S+ +R+++L+G++LSNHH  +   +W V V +  V+  S +  + + +   R+  F ++  +  +W  AL+ AA  +  D
Sbjct:   16 ISGWVTKEGRLLRSKHRRYLKLRGSILSNHHSENSPASWEVSVVERPVSSGSKRNELVIPLPTRRVSFFVENDREFTKWMEALKKAASNSVTD 108          
The following BLAST results are available for this feature:
BLAST of Gvermi12380.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J426_9FLOR1.730e-6053.27PH domain-containing protein n=1 Tax=Gracilariopsi... [more]
R7QS02_CHOCR1.570e-4546.70PH domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A5J4YT70_PORPP7.890e-1035.00Myosin light chain kinase A n=1 Tax=Porphyridium p... [more]
A0A7S0T7G0_9RHOD2.750e-933.33Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A5J4YUJ5_PORPP1.280e-833.70Putative myosin light chain kinase n=1 Tax=Porphyr... [more]
A0A1X6NZW0_PORUM1.730e-732.98Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1ET06_9RHOD1.090e-626.88Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 1..90
e-value: 1.3E-5
score: 34.7
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 1..88
score: 7.513
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..93
e-value: 1.1E-8
score: 36.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..172
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 1..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4440622..4441191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12380.t1Gvermi12380.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4440622..4441191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12380.t1 ID=Gvermi12380.t1|Name=Gvermi12380.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=190bp
MEGFLAKRGKRSGSRVKRFMRLQGALLSNHHGPDDAPTWRVDVSDARVAC
NSHKKRISLEVFGNRLELFADSAADCERWFGALRAAARQAARDDRAAGKE
NSSPQLAAVDSDGAAAQQPALQRPLARTSDLGKNFKVVKPNPSQSLASQS
SNGSDEPADQSHHALTVNGQVYEETPASMIFKQFNFPPK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf