Gvermi12515.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12515.t1
Unique NameGvermi12515.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length227
Homology
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BLAST of Gvermi12515.t1 vs. uniprot
Match: A0A2V3IZD7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZD7_9FLOR)

HSP 1 Score: 169 bits (427), Expect = 3.150e-50
Identity = 86/133 (64.66%), Postives = 104/133 (78.20%), Query Frame = 0 
Query:   94 MAYSWDRIASEPNARFLNSHIYYFWGVNIENERNSTMGETRYVFDLHEAVTSGVLTDRTILVHADWHTDVNYGAVRYRVYFRQKHGDNSELRGGNIDLQVNPGTQPPINATLLARLIIKVRPLFTNVRVELVD 226
            M Y W    S  N R+LNSHIYYFW V+IE +R  T G+TRYVFDLH A T+GVLT+R ILVHADWHTDVNYG V YRVY+R+K  D SEL G +IDLQV+PGT+P INATL+A+L I ++ + T+VRVELV+
Sbjct:    1 MEYIWHIDPSRQNERYLNSHIYYFWDVDIEGDRTGTRGDTRYVFDLHTAYTTGVLTEREILVHADWHTDVNYGPVHYRVYYRRKD-DKSELPG-SIDLQVHPGTKPSINATLVAKLHIGIQRVLTSVRVELVN 131
The following BLAST results are available for this feature:
BLAST of Gvermi12515.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZD7_9FLOR3.150e-5064.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..226
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 7..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:6001975..6002655 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12515.t1Gvermi12515.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 6001975..6002655 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12515.t1 ID=Gvermi12515.t1|Name=Gvermi12515.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=227bp
MMMMRQYIILFSIFGLLVFTRAQYVFQHVCPERCEHHHNSYLKATRLCHY
AHIKDLCQVTPCTTIQAKHGYSCTSYPNSLTVYTNQLGALELVMAYSWDR
IASEPNARFLNSHIYYFWGVNIENERNSTMGETRYVFDLHEAVTSGVLTD
RTILVHADWHTDVNYGAVRYRVYFRQKHGDNSELRGGNIDLQVNPGTQPP
INATLLARLIIKVRPLFTNVRVELVD*
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