Gvermi12465.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12465.t1
Unique NameGvermi12465.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length304
Homology
BLAST of Gvermi12465.t1 vs. uniprot
Match: A0A2V3IER0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IER0_9FLOR)

HSP 1 Score: 355 bits (911), Expect = 6.700e-120
Identity = 186/305 (60.98%), Postives = 221/305 (72.46%), Query Frame = 0
Query:    2 DMFSVKPEISALPHAQYVDPDASLHDTIASFMRITENMEHILPPDLNLTAIQQPSIEEELLTPVATPVASCASSAPPLLSYAAPLLNLAPEPQPLTPTYHTRNA-HCSSPCAATINSALQAAICAQAS--AAQLQCHTPSCSPCTVRDMSPLSSVRKRKTARKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIARSPHDWLCPHCAEICPPRSQCHIYNRINARRKKVGQKRSDSMASALASSDALVRPYAPLLEPSAVQLLQPPPNFRLNLPPNFSQP 303
            DMF+VKP++SA P     D DA LH TI+S M +T+ +EHILPPDLNLT +   S    L     TP +  A SAP   +  +   +  P  Q  TP Y + +    S+   +TINSA  AA  A  +         TPSCSPC VR++  L++ RKRK+ RKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQC+REQGWDYDAI+ +P  WLCPHCAEICPPRSQCHIYNRINARRK+VGQK+++S+A+A ASSD L+ PYA L E  AVQL+QPPPNFRLNLPP +S+P
Sbjct:    3 DMFTVKPDLSASPTLHLTDTDAVLHQTISSLMHMTDEVEHILPPDLNLTPVNLISPAIPLPHDSLTPPSFTACSAPNSFAPTSACTSTIPSQQHSTPAYQSYSRPELSTLSISTINSAYHAASVAAGAPVGGPWPLSTPSCSPCAVRELPALNTPRKRKSTRKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCIREQGWDYDAISANPDQWLCPHCAEICPPRSQCHIYNRINARRKRVGQKQNNSVAAACASSDMLLAPYAHLFEQPAVQLIQPPPNFRLNLPPQYSKP 307          
BLAST of Gvermi12465.t1 vs. uniprot
Match: A0A1X6P4T1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4T1_PORUM)

HSP 1 Score: 104 bits (260), Expect = 2.410e-21
Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 0
Query:  169 VASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIARSPHDWLCPHCAE-ICPPRSQCHIYNRINARRK 250
            V SRFCH+CSR+P+K      C  +R G CRK VCE+C  + GWD+ A       W+CPHCA+  CPPR+QCH Y R N RR+
Sbjct:  811 VPSRFCHVCSRVPKKSSHHIVCANIRGGGCRKTVCERCFADNGWDWGAAVAKGSAWVCPHCADGECPPRAQCHTYARTNGRRR 893          
BLAST of Gvermi12465.t1 vs. uniprot
Match: A0A7S1TIE4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIE4_9RHOD)

HSP 1 Score: 99.0 bits (245), Expect = 1.360e-20
Identity = 47/122 (38.52%), Postives = 64/122 (52.46%), Query Frame = 0
Query:  135 HTPSCSPCTVRDMSPLSSVRKRKTARKP------KTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIARSPHDWLCPHCAEICPPRSQCHIYNRINARRK 250
            H P     T  D+   +   + +T  KP      K Y K + S  CHIC R       +  C  +R G CRK+VC++C     WD+++ A+    WLC HC E+CPPR+QC IY R+N RRK
Sbjct:  130 HLPRNQTSTPMDVEGSTPANENQTVLKPVRQFKVKKYFKRIPSHHCHICRRSALMIP-TVVCLNIRGGLCRKVVCQKCFETYQWDFESAAKEDSGWLCTHCREVCPPRAQCFIYQRVNTRRK 250          
BLAST of Gvermi12465.t1 vs. uniprot
Match: A0A7S1XH97_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH97_9RHOD)

HSP 1 Score: 99.0 bits (245), Expect = 5.560e-20
Identity = 47/122 (38.52%), Postives = 64/122 (52.46%), Query Frame = 0
Query:  135 HTPSCSPCTVRDMSPLSSVRKRKTARKP------KTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIARSPHDWLCPHCAEICPPRSQCHIYNRINARRK 250
            H P     T  D+   +   + +T  KP      K Y K + S  CHIC R       +  C  +R G CRK+VC++C     WD+++ A+    WLC HC E+CPPR+QC IY R+N RRK
Sbjct:  227 HLPRNQTSTPMDVEGSTPANENQTVLKPVRQFKVKKYFKRIPSHHCHICRRSALMIP-TVVCLNIRGGLCRKVVCQKCFETYQWDFESAAKEDSGWLCTHCREVCPPRAQCFIYQRVNTRRK 347          
BLAST of Gvermi12465.t1 vs. uniprot
Match: A0A5J4Z5T1_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5T1_PORPP)

HSP 1 Score: 99.0 bits (245), Expect = 1.100e-19
Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 0
Query:  144 VRDMSPLSSVRKRKTARKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIARSPHDWLCPHCAEICPPRSQCHIYNRINARRKKVGQKRSDSMASALASSDA 269
            V+D S L  + +  +  K + YS   ASRFCHIC+R     + + +C     G CRKI+CE+C  + GWD++A ++    W C HC  ICP R+QC+ Y R N RR+  G +R   +   L +  A
Sbjct:  313 VKDASVLKELEQLASKPKIRRYSNSTASRFCHICARSMDSVR-AISCFNTLFGVCRKIICEKCFEQYGWDWEAASKPGARWSCAHCKGICPERAQCNTYKRTNQRRRLKGLERRKQLEELLIAGGA 437          
BLAST of Gvermi12465.t1 vs. uniprot
Match: A0A7S1TKP7_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKP7_9RHOD)

HSP 1 Score: 90.9 bits (224), Expect = 1.730e-17
Identity = 52/129 (40.31%), Postives = 70/129 (54.26%), Query Frame = 0
Query:  171 SRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIARSPHDWLCPHCAEICPPRSQCHIYNRIN----ARRKKVGQKRSDSM-----ASALASSDAL-VRPYAP-LLEPSAVQLLQP 288
            S+FCHIC+R   K    A CR + +  CRK++CE+C  + GWD++        W C HCAE CP  +QC  YNR N    ARRK+   +R +S       S   SS  L  +P+AP LL   A+Q + P
Sbjct:  142 SKFCHICTRSY-KAVRQAVCRNLVKNTCRKVICEKCFEDFGWDFELAISEDSGWCCCHCAEKCPSTAQCTHYNRANPKVEARRKRQRVERKESKLRMSRTSGFESSSTLRAKPFAPPLLLQKALQPMPP 269          
BLAST of Gvermi12465.t1 vs. uniprot
Match: A0A5J4YS79_PORPP (Uncharacterized protein n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YS79_PORPP)

HSP 1 Score: 85.5 bits (210), Expect = 3.210e-15
Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 0
Query:  171 SRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIARSPHDWLCPHCAEICPPRSQCHIYNRINARRK 250
            SRFCHIC++   K    A C  ++ G CRK++CE+C  E GWD++      ++W C HC  ICP R+QC++Y +   R +
Sbjct:  188 SRFCHICTKSA-KVVRQAVCYNVQTGSCRKVICEKCFAENGWDFELATAPDNEWYCCHCMRICPTRAQCNVYKKNTQRTR 266          
BLAST of Gvermi12465.t1 vs. uniprot
Match: A0A7S1TN34_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN34_9RHOD)

HSP 1 Score: 86.3 bits (212), Expect = 4.210e-15
Identity = 39/98 (39.80%), Postives = 60/98 (61.22%), Query Frame = 0
Query:  171 SRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIARSPHDWLCPHCAEICPPRSQCHIYNRINAR---RKKVGQKRSDSMASALA 265
            S +CH+C R  +  +  A C +++ G+CRK+VCE+C  + GW++         WLCPHC  ICPPR+ C+IY R N     RK+  +K S ++A++ A
Sbjct:  648 SHYCHVCLRHSKLVRQVA-CSKLQLGHCRKVVCERCFAQFGWNWALACDESTAWLCPHCLGICPPRATCNIYKRTNRELQARKRATRKLSATVATSAA 744          
BLAST of Gvermi12465.t1 vs. uniprot
Match: A0A1X6P314_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P314_PORUM)

HSP 1 Score: 73.2 bits (178), Expect = 7.850e-11
Identity = 50/130 (38.46%), Postives = 62/130 (47.69%), Query Frame = 0
Query:  127 ASAAQLQCHTPSCSPCTVRDMSPLSSVRKRKTARKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQG--------WDYDAIARSPHDWLCPHCAEICPPRSQCHIYNRINAR 248
            A+ A     TP+ S   VR + P    RKR+ A    T+SKPV SRFCH+CSR     +            CRK+VC++C    G        WD  A+A  P  W C HC   CP R+QC  Y R N R
Sbjct:  250 ATGANATARTPA-SETPVRTVPP---PRKRRKA----TFSKPVPSRFCHLCSRTSPAVRHIVCGALATSSTCRKVVCDRCFTTAGAAGINGVTWD-QAVAAGPA-WRCCHCVGSCPDRAQCRNYTRTNER 369          
BLAST of Gvermi12465.t1 vs. uniprot
Match: A0A7S1TNV5_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNV5_9RHOD)

HSP 1 Score: 70.1 bits (170), Expect = 2.000e-10
Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 0
Query:  171 SRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIARSPHDWLCPHCAEICPPRSQCHIYNRIN 246
            S+FCH+CSR   K +         +G CRK+VC++C  E G+D++    S   W C HC  ICPP+++C +Y+  N
Sbjct:  165 SKFCHVCSRNGPKVRMLVCVNYFVDGRCRKVVCDRCFAESGYDFEDPILSL-TWTCFHCQGICPPKARCKVYSSAN 239          
The following BLAST results are available for this feature:
BLAST of Gvermi12465.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IER0_9FLOR6.700e-12060.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P4T1_PORUM2.410e-2151.81Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TIE4_9RHOD1.360e-2038.52Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XH97_9RHOD5.560e-2038.52Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z5T1_PORPP1.100e-1938.10Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1TKP7_9RHOD1.730e-1740.31Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A5J4YS79_PORPP3.210e-1541.25Uncharacterized protein n=2 Tax=Porphyridium purpu... [more]
A0A7S1TN34_9RHOD4.210e-1539.80Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A1X6P314_PORUM7.850e-1138.46Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TNV5_9RHOD2.000e-1039.47Hypothetical protein n=1 Tax=Erythrolobus australi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4942537..4943448 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12465.t1Gvermi12465.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4942537..4943448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12465.t1 ID=Gvermi12465.t1|Name=Gvermi12465.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=304bp
MDMFSVKPEISALPHAQYVDPDASLHDTIASFMRITENMEHILPPDLNLT
AIQQPSIEEELLTPVATPVASCASSAPPLLSYAAPLLNLAPEPQPLTPTY
HTRNAHCSSPCAATINSALQAAICAQASAAQLQCHTPSCSPCTVRDMSPL
SSVRKRKTARKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRK
IVCEQCVREQGWDYDAIARSPHDWLCPHCAEICPPRSQCHIYNRINARRK
KVGQKRSDSMASALASSDALVRPYAPLLEPSAVQLLQPPPNFRLNLPPNF
SQP*
back to top