Gvermi12292.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12292.t2
Unique NameGvermi12292.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length610
Homology
BLAST of Gvermi12292.t2 vs. uniprot
Match: A0A2V3J0I8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0I8_9FLOR)

HSP 1 Score: 479 bits (1232), Expect = 6.280e-155
Identity = 261/563 (46.36%), Postives = 363/563 (64.48%), Query Frame = 0
Query:   51 SLTTLSEDDGEVQRDELMEKKKHLVVSADVFREMVKYKLDIRNTCRDLGQVVAKSVFSALEDSQADFFNREIRRYLELEKKWIDDQLAVAFISISQMESIMPNLVPTKQSDPKMFHQYVSFYDEATANFKDITLTVIEFTYESICRLSDVVLS------RSQGTQEEIYENCLRPEKFSGKDFLMQCSKPDVDLTSTVLDSSESWPELQAEQPKRVSDEENDDGSFGEIPMRGKLVVDVRNVIHEMLRGMMVMYLANAETVLQAAAPLLPVCKEDAVNEQLWTMSSSPLTAYTMAVENLVQANELMADFLLNLKSSETHVLDSSEFIEPQVATCHLVSQETRDVLHAELVGSLNELGAEAQQGVKAAISAMHLRVSAILFAPEATQPYTSTNDHVQAVYDGFEGRQEPLDVVKPKPSKAFIEVCEFLDHQIHFIVKNIKSCNRDFILAEVASLTRDSIMKCWCCSPGHISLSGAMQMIADSRMVFKPFQKHGIPVQTLRCLPSLAQLFLESPDGLWACIEGSALVDVDARILVGLLKKRIDFGSREIVKICQSLGASEEELLT 607
            SLT   E + +V +  ++++K++LV+  ++F+ + KYK DI +T   L   +A+  F A E   A F   +   YLELEKKW+DDQLA AF SIS +E+ +P L PT +SD ++FH+Y  FY++ +  FK  T+  I+ T+E+I R+S+V L+      RS+    +   N        GK      S     ++S  ++S  +   L           E+   SF +    G L   +R  I ++LRG++++Y+ANAET LQAAAPLLP CKEDAV E+LW  ++SPLTAY MAVE L QANELMA FLL+LK +++H  D+  F+  +     LVSQETRD+LH++L G L ELGAEAQQGVKAA SA+  R++A+L  PEA   Y+S +D  +      + R   L++ K +P+ AFI+ C+FL+ QI F+  N+  CNRDFIL E+  L RD ++ CW   P  I+L G+MQMIADSR++   FQ HG+ V+ +RCLPSLAQLFLE P+GLW+C+E SAL +VDAR+LV +LKKR DFGSR I+K+CQSLGA+ EEL T
Sbjct:  415 SLTASDERENDVHQG-IIDRKRYLVLHTELFKALAKYKTDILDTHHQLSLPIAEDAFWASEGPYATFVTEQALSYLELEKKWVDDQLATAFSSISGIEARLPQLAPTPRSDFRVFHKYARFYNQVSTGFKQTTVLCIDITFEAIHRMSEVFLAFTADSVRSKLKDSDPGGNTRNDSICLGKSEEQHPSS----ISSGTIESRSALSPLS----------EDGTASFAKAVPEGTLATRIRVAIQDVLRGLLLLYVANAETALQAAAPLLPTCKEDAVLEELWVFTASPLTAYVMAVEVLSQANELMARFLLSLKKAKSHETDAEGFLVLETPLNLLVSQETRDLLHSQLRGGLEELGAEAQQGVKAATSAVGFRLNAMLSVPEAVNAYSSVSDTKRLSKVPEKQRARLLNIPKLQPTNAFIKACKFLEQQIIFVASNVNECNRDFILWELGVLARDVVLHCWSKGPPPITLKGSMQMIADSRIILSTFQNHGVSVEAVRCLPSLAQLFLEPPEGLWSCVESSALTNVDARVLVSMLKKRPDFGSRGIIKVCQSLGANVEELST 962          
BLAST of Gvermi12292.t2 vs. uniprot
Match: R7QC67_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC67_CHOCR)

HSP 1 Score: 256 bits (653), Expect = 7.860e-71
Identity = 162/503 (32.21%), Postives = 275/503 (54.67%), Query Frame = 0
Query:   40 TLFPSLESCRA-SLTTLSEDDGEVQRDELMEKKKHLVVSADVFREMVKYKLDIRNTCRDLGQVVAKSVFSALE-DSQADFFNREIRRYLELEKKWIDDQLAVAFISISQMESIMPNLVPTKQSDPKMFHQYVSFYDEATANFKDITLTVIEFTYESICRLSDVVLSRSQGTQEEIYENCLRPEKFSGKDFLMQCSKPD---VDLTSTVLDSSESWPELQAEQPKRVSDEENDDGSFGEIPMRGK-LVVDVRNVIHEMLRGMMVMYLANAETVLQAAAPLLPVCKEDAVNEQLWTMSSSPLTAYTMAVENLVQANELMADFLLNLKSSETHVLDSSEFIEPQVATCHLVSQETRDVLHAELVGSLNELGAEAQQGVKAAISAMHLRVSAILFAPEATQPYTSTNDHVQAVYDGFEGRQEPLDV-VKPKPSKAFIEVCEFLDHQIHFIVKNIKSCNRDFILAEVASLTRDSIMKCWCCSPGHISLSGAMQMIADSRMVFKPFQKH 535
            T   S+E  R+ S+T   E+  E     L++K++ L V  +VF+ M K + D+   C  + +     +F     D    F  + + + L  EK W+D QL  AF  I+++E+  P L P + SD   +H+Y SFY + ++ +  +T   IE T+ES+CR++ ++               L  E  S KDF+   ++ +   +   S +   SES  + +  Q +R    E          M  K  + ++  V+ EML G+++ YLANAET+LQAA+ LLP+ + DA    LW    SPLTAY  AVE L+++N+ +++FLL L+ S+     SS  + P+      +   TR+ LH +L   L++LGAEAQ GV+AA++++  R+ A+L + +A Q Y S N    AV++    +Q P  + +  +PS AF+    F++ Q+H ++ N+ S NR+F+++E++ + ++++++ WC   G + L+GA Q+IAD R + + FQ H
Sbjct:  459 TARDSVEILRSLSITENREEKREEADSVLLQKRQDLTVCGEVFKSMGKLRNDLLVQC-SIPECNHSKIFQEQGMDPFICFARKWVPQLLRQEKAWVDQQLGAAFFDITRVEANAPRLAPRENSDAAAYHRYRSFYSQISSRYLQMTGNAIESTHESLCRIATIL------------STVLSIESLSLKDFVASFTEAEQSPMHENSLLEHISESVLKAERFQERREVLTEGTASPKINTTMSSKHAIAEISAVLREMLDGLVICYLANAETILQAASHLLPISEADAQAHDLWVSGVSPLTAYMQAVEVLLRSNQALSEFLLTLEFSDHVSQFSSPSLSPEDELAMYIPSRTRERLHRDLTTGLSDLGAEAQVGVRAAVTSVRARLFAMLSSKDAMQAYVSLNRDDSAVFNE-NLKQGPSSLGMDVEPSPAFLNASAFVEQQLHSVLSNVHSANREFVISELSVIAKETVLQHWCLCAGPLFLAGAFQLIADGRAMARVFQDH 947          
The following BLAST results are available for this feature:
BLAST of Gvermi12292.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0I8_9FLOR6.280e-15546.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QC67_CHOCR7.860e-7132.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009976Exocyst complex component Sec10-likePFAMPF07393Sec10coord: 353..588
e-value: 2.8E-8
score: 32.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4110821..4112650 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12292.t2Gvermi12292.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4110821..4112650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12292.t2 ID=Gvermi12292.t2|Name=Gvermi12292.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=610bp
MKIFSETEGRIKNDAIETKLEVGESQNNMKKEAHSKSCKTLFPSLESCRA
SLTTLSEDDGEVQRDELMEKKKHLVVSADVFREMVKYKLDIRNTCRDLGQ
VVAKSVFSALEDSQADFFNREIRRYLELEKKWIDDQLAVAFISISQMESI
MPNLVPTKQSDPKMFHQYVSFYDEATANFKDITLTVIEFTYESICRLSDV
VLSRSQGTQEEIYENCLRPEKFSGKDFLMQCSKPDVDLTSTVLDSSESWP
ELQAEQPKRVSDEENDDGSFGEIPMRGKLVVDVRNVIHEMLRGMMVMYLA
NAETVLQAAAPLLPVCKEDAVNEQLWTMSSSPLTAYTMAVENLVQANELM
ADFLLNLKSSETHVLDSSEFIEPQVATCHLVSQETRDVLHAELVGSLNEL
GAEAQQGVKAAISAMHLRVSAILFAPEATQPYTSTNDHVQAVYDGFEGRQ
EPLDVVKPKPSKAFIEVCEFLDHQIHFIVKNIKSCNRDFILAEVASLTRD
SIMKCWCCSPGHISLSGAMQMIADSRMVFKPFQKHGIPVQTLRCLPSLAQ
LFLESPDGLWACIEGSALVDVDARILVGLLKKRIDFGSREIVKICQSLGA
SEEELLTGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009976Sec10-like