Gvermi12350.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12350.t1
Unique NameGvermi12350.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length796
Homology
BLAST of Gvermi12350.t1 vs. uniprot
Match: A0A2V3IIY4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIY4_9FLOR)

HSP 1 Score: 510 bits (1314), Expect = 1.580e-166
Identity = 452/780 (57.95%), Postives = 528/780 (67.69%), Query Frame = 0
Query:   25 HSNLLNSYAAHMKSLSAALDTRAHALRXXXXXXXXXXXXXXXXXXXXXXLERRMRSEMTAFLRDVAARQRQLSRWEQRAEKGRKLVASITNNKEQLKTTKTALEHKNAQLQLVEKEYAALAQSRDTVTSQIEAAKTELSRLAXXXXXXXXXXXXXXXXXXXXXXLEGAVRKRERDVDATEAAVTLKSERLASLENFERVVAPLQTFVDEFCALEQREAVSIRDDVAEGVQLALLALREMHSKLRSLKDTRAQLDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRADIDRREEAAHKKERELMQRESKLHNXXTAITQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKELELVAREASVPNNSRPFLSDNSAKIKQRSQGLQHDTQSGIQELQDPIGEEVTKEHS-VSEEGGTDDK---ADVPLSRKQLPPRTVRRQLEFETIKRSVPNVSQNDIRREDRDDNDNESEVAAEQLLPELVSARALWKERILRLEVVVRNMRENTWGLKAHVQPVLHAVAERLGAVRKEIESAPLQHSAGSSKRDYAAEQGLQVRWGSIMREQLDAVREVQTGMLIGLNKQEDIAQSGVASDESSS--AGEVNSGIRSAGSLEQESSVEATLDVTTTVELKDNLRGQKKEVRAVPSLFQGIGSRRQARG--SQNGSMALQA-RDEGHTRRTRRRI-AVEPRSLGVPRSRHAEDGATDLFQELASLRNELDTITGILN 794
            HS LL+SYAAHMKSLS AL        XXXXXXXXXXXXXXXXXXXXX LERRMRSEMTAFLRDVAARQRQLSRWEQRAEKGRKL A+I+ NK++L+ TK  LE K ++L L+EKEYA L +S+ +++++++AA++E     XXXXXXXXXXXXXXXXXXXXXX E AVRKRERDVDA+EAA+T+KS+RL+ LE FERVV PLQTFVDEF + E R+ VSIRDDV +GVQ+AL ALREM S+ + L D RA+L++                                                        TR + DRREE  HK              XX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              +SR ++S+NSA+  ++   L  D  +G  +  D  G       S V   G   DK    D    RK+  PR+VRRQLEFET  R +P  +  + +   + D D+ESEVAAEQLLPELV ARALWKERILRLE VVRNMRENTWGLK HVQPVL AVA++LG VRKEIE AP QHSAG+++RDYA EQ LQVRWGS+MR+QLDAVREVQTGMLIGLNKQED A++G  S+ESS+   G+  SG RS GS+E ESSVEATLDVTTT +      G+     A+PSLFQ   SR QARG    N S A +A R+ G  ++T+ R+ A E R  G       +DGA DL QELASLR+ELDTITGILN
Sbjct:   25 HSKLLDSYAAHMKSLSVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLERRMRSEMTAFLRDVAARQRQLSRWEQRAEKGRKLAAAISKNKDELRNTKNVLEDKTSELHLLEKEYATLIESKHSISTELDAARSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAVRKRERDVDASEAAITVKSDRLSWLEQFERVVTPLQTFVDEFASFEHRDTVSIRDDVPKGVQMALNALREMRSRSKVLNDHRAELEAVQATISDREKALRDKELATRQREHDLDVLETRLSNEQDKISLQTTELRESIRSLDDTRTEHDRREEGMHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESSRVYISENSARRSRQDMSLDADVHAGSDK--DSHGANAGGGASGVQVMGDAVDKNTRGDGSPPRKRHAPRSVRRQLEFETAHRRIPASNMKNEQDAAQKDGDDESEVAAEQLLPELVGARALWKERILRLEAVVRNMRENTWGLKPHVQPVLTAVADKLGTVRKEIEEAPPQHSAGTARRDYATEQSLQVRWGSVMRQQLDAVREVQTGMLIGLNKQEDRAKTGEVSEESSTITTGDRVSGQRSTGSIEGESSVEATLDVTTTGDF-----GEHGGAGAIPSLFQRFRSRLQARGRPEDNASAAAEAPRNGGVAQQTKTRVRANEGRPGGSGSGEADDDGANDLLQELASLRSELDTITGILN 797          
BLAST of Gvermi12350.t1 vs. uniprot
Match: R7QUJ6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUJ6_CHOCR)

HSP 1 Score: 179 bits (455), Expect = 2.700e-43
Identity = 163/437 (37.30%), Postives = 218/437 (49.89%), Query Frame = 0
Query:  427 KELELVAREASVPNNSRPFLSDNSAKIKQRSQGLQHDTQSGIQELQDPIGEEVTKEHSVSEEGGTD-----DKADVPLSRKQLP-------------------PRTVRRQLEFET-IKRSV----------PNVS----------QNDIRREDR---DDNDNESEVAAEQLLPELVSARALWKERILRLEVVVRNMRENTWGLKAHVQPVLHAVAERLGAVRKEIESAPLQHSAGSSKRDYAAEQGLQVRWGSIMREQLDAVREVQTGMLIGLNKQED--IAQSGVA---SDESSSAGEVNSGIRSAGSLEQ---------ESSVEATLDVTTTVELKDNLRGQKKEVRAVPSLFQGIGSRRQARGSQNGSMALQARDEGHTRRTR-------RRIAVEPRSLGVPRSRHAEDGATDLFQELASLRNELDTITGILN 794
            ++LE  AREA   N +   L + S + K+R    +H           P  E      +V E  G +       A  P S  Q                     P TVRRQLEFET ++R            P VS          Q+D+ +      +D+DNESE AA+ LLPEL+ ARALWKER++RLE VV NMRENTW LK HVQP+L +V+ +L  +  EI+S P +H   SSK  Y  EQ  QVRWG+++REQLDAVR+VQTGMLI LNK+ED    +SG A   S++S SA +  S   S G  E+         ESSV+ TLD T      D+     ++  ++ S F+    RRQ R  +   +A  +R+    RR R       R    +P   GV          +DL +EL S+RN+L++ITG  N
Sbjct:  430 RDLEFTAREAK-KNAALDALLEASVRKKKRRSSREHSVSPESGSGSSPTPEPQVLNPTVVETRGKNVQRIVQSAPAPASTSQAARPTGQSQANDLNGALQDPEPSTVRRQLEFETTVQRQATTSGGAVLPAPLVSRLPQAEKAPNQDDLDKAPTHVVNDDDNESEAAADDLLPELLGARALWKERVVRLEAVVENMRENTWALKPHVQPILTSVSTQLRDIHTEIDSTPERHPE-SSKASYGTEQQRQVRWGALIREQLDAVRDVQTGMLIALNKEEDSMFQESGPAPLPSEQSESATQTTSE-PSEGPREKRSPPHMAGDESSVDVTLDATDGRLFPDHSLEATEDFGSITSSFRKF--RRQMRAQRG--LAEASRNSRIIRRERVPREAPARMRPRQPVGRGVVVRETRGIRGSDLLRELESVRNDLESITGSTN 859          
The following BLAST results are available for this feature:
BLAST of Gvermi12350.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIY4_9FLOR1.580e-16657.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QUJ6_CHOCR2.700e-4337.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 396..416
NoneNo IPR availableCOILSCoilCoilcoord: 110..199
NoneNo IPR availableCOILSCoilCoilcoord: 333..353
NoneNo IPR availableCOILSCoilCoilcoord: 267..290
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availableGENE3D1.10.287.1490coord: 253..423
e-value: 1.0E-5
score: 26.8
NoneNo IPR availableGENE3D1.20.58.60coord: 12..165
e-value: 3.4E-5
score: 25.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..512
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 660..689
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..795
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4303363..4305750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12350.t1Gvermi12350.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4303363..4305750 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12350.t1 ID=Gvermi12350.t1|Name=Gvermi12350.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=796bp
MLLPLTPPLTPPMSAAPSPPSTPPHSNLLNSYAAHMKSLSAALDTRAHAL
RTAEARLESRGSALRAHERALASLERRMRSEMTAFLRDVAARQRQLSRWE
QRAEKGRKLVASITNNKEQLKTTKTALEHKNAQLQLVEKEYAALAQSRDT
VTSQIEAAKTELSRLATEARRISDEKIRLETLANRLEMLEGAVRKRERDV
DATEAAVTLKSERLASLENFERVVAPLQTFVDEFCALEQREAVSIRDDVA
EGVQLALLALREMHSKLRSLKDTRAQLDSLQATLEQRENSLRERELSLRQ
REHNLDVTEAKVSNEQDKLSMQSNQLKDGMRSLDDTRADIDRREEAAHKK
ERELMQRESKLHNRETAITQSEKTLARRERSIRRAHAAVAEREKLIDQRE
REVETERAKFNNMKRSIDLREVMLETKELELVAREASVPNNSRPFLSDNS
AKIKQRSQGLQHDTQSGIQELQDPIGEEVTKEHSVSEEGGTDDKADVPLS
RKQLPPRTVRRQLEFETIKRSVPNVSQNDIRREDRDDNDNESEVAAEQLL
PELVSARALWKERILRLEVVVRNMRENTWGLKAHVQPVLHAVAERLGAVR
KEIESAPLQHSAGSSKRDYAAEQGLQVRWGSIMREQLDAVREVQTGMLIG
LNKQEDIAQSGVASDESSSAGEVNSGIRSAGSLEQESSVEATLDVTTTVE
LKDNLRGQKKEVRAVPSLFQGIGSRRQARGSQNGSMALQARDEGHTRRTR
RRIAVEPRSLGVPRSRHAEDGATDLFQELASLRNELDTITGILNI*
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