Gvermi12434.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12434.t1
Unique NameGvermi12434.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length89
Homology
BLAST of Gvermi12434.t1 vs. uniprot
Match: A0A2V3IIV0_9FLOR (Transforming growth factor-beta-induced protein ig-h3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIV0_9FLOR)

HSP 1 Score: 149 bits (375), Expect = 2.570e-42
Identity = 72/88 (81.82%), Postives = 78/88 (88.64%), Query Frame = 0
Query:    1 MGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYSRLD 88
            MGL+ Q+P WMYGPPY AAKQEEYEPIS+A PDVS VDYQ+MPPGSV+V PDSVNA ELNPVSGMSKYIGQTKR+V  D LSDYSRLD
Sbjct:  230 MGLMTQRPFWMYGPPYCAAKQEEYEPISIAQPDVSFVDYQVMPPGSVIVTPDSVNAAELNPVSGMSKYIGQTKRLVSGDGLSDYSRLD 317          
BLAST of Gvermi12434.t1 vs. uniprot
Match: A0A291FEC1_GRIPA (LR9 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEC1_GRIPA)

HSP 1 Score: 134 bits (338), Expect = 2.180e-36
Identity = 64/88 (72.73%), Postives = 77/88 (87.50%), Query Frame = 0
Query:    1 MGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYSRLD 88
            MGLI Q P WMYGPP+NA+KQE++EPIS+A PDVS+VDYQLMPPGSV+V PD V+A ++ PVSGMSK+IG+TKR+V  D LSDYSRLD
Sbjct:  275 MGLIKQLPFWMYGPPFNASKQEDFEPISIANPDVSSVDYQLMPPGSVIVQPDEVSAAKMLPVSGMSKHIGKTKRLVEGDGLSDYSRLD 362          
BLAST of Gvermi12434.t1 vs. uniprot
Match: A0A1X6NYY5_PORUM (FAS1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYY5_PORUM)

HSP 1 Score: 129 bits (325), Expect = 1.080e-34
Identity = 63/88 (71.59%), Postives = 72/88 (81.82%), Query Frame = 0
Query:    1 MGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYSRLD 88
            MGLI Q P W YGPPYNAA QE+YEPIS+A PDV+A+DYQ+ PPGSVVV PDSVN+ ELNPVSG SKYIG+TKR V    +S YS+LD
Sbjct:  247 MGLIKQLPFWAYGPPYNAAYQEDYEPISIAAPDVAAIDYQVFPPGSVVVVPDSVNSGELNPVSGYSKYIGKTKRNVEGAGISQYSKLD 334          
BLAST of Gvermi12434.t1 vs. uniprot
Match: R7QRM9_CHOCR (FAS1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRM9_CHOCR)

HSP 1 Score: 125 bits (315), Expect = 1.010e-33
Identity = 60/87 (68.97%), Postives = 74/87 (85.06%), Query Frame = 0
Query:    1 MGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYSRL 87
            MGL+ Q P W YGPP+NAAKQE+YEPIS+A P+ ++VDYQLMPPG+V+V PD V+A +L PVSGMSKYIG+TKR+V + A SDYSRL
Sbjct:  191 MGLVNQLPFWQYGPPFNAAKQEDYEPISIAQPEGASVDYQLMPPGTVIVTPDEVSADKLLPVSGMSKYIGKTKRLVEEGAQSDYSRL 277          
BLAST of Gvermi12434.t1 vs. uniprot
Match: A0A7S0ZBR4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBR4_9RHOD)

HSP 1 Score: 115 bits (288), Expect = 2.420e-29
Identity = 57/85 (67.06%), Postives = 67/85 (78.82%), Query Frame = 0
Query:    1 MGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYS 85
            M LI Q+P WMYGPPYNAAKQEEYEPIS+A    + VDYQ +P G+V   PDSVN+LELNPVSGMSKYIG TK++ G  A+S Y+
Sbjct:  230 MNLIEQKPFWMYGPPYNAAKQEEYEPISIAE-SKAFVDYQKLPQGTVKFVPDSVNSLELNPVSGMSKYIGNTKKLTGDGAISSYA 313          
BLAST of Gvermi12434.t1 vs. uniprot
Match: A0A5J4Z027_PORPP (FAS1 domain-containing protein n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z027_PORPP)

HSP 1 Score: 114 bits (284), Expect = 1.230e-28
Identity = 56/85 (65.88%), Postives = 67/85 (78.82%), Query Frame = 0
Query:    1 MGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVAPDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYS 85
            M L+ QQP WMYGPPYNA  Q+EYEPIS A P  + VDYQ+  PG+V V+PDSVNA ELNPVSGMSKYIG+T+++VG   +SD S
Sbjct:  245 MNLMKQQPFWMYGPPYNAVTQDEYEPISAAAPK-AFVDYQIFAPGTVKVSPDSVNANELNPVSGMSKYIGKTQKLVGDQGISDRS 328          
The following BLAST results are available for this feature:
BLAST of Gvermi12434.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IIV0_9FLOR2.570e-4281.82Transforming growth factor-beta-induced protein ig... [more]
A0A291FEC1_GRIPA2.180e-3672.73LR9 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID... [more]
A0A1X6NYY5_PORUM1.080e-3471.59FAS1 domain-containing protein n=1 Tax=Porphyra um... [more]
R7QRM9_CHOCR1.010e-3368.97FAS1 domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A7S0ZBR4_9RHOD2.420e-2967.06Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z027_PORPP1.230e-2865.88FAS1 domain-containing protein n=2 Tax=Porphyridiu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4735314..4735580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12434.t1Gvermi12434.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4735314..4735580 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12434.t1 ID=Gvermi12434.t1|Name=Gvermi12434.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=89bp
MGLIAQQPAWMYGPPYNAAKQEEYEPISVAVPDVSAVDYQLMPPGSVVVA
PDSVNALELNPVSGMSKYIGQTKRIVGKDALSDYSRLD*
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