Gvermi12215.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12215.t1
Unique NameGvermi12215.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length122
Homology
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BLAST of Gvermi12215.t1 vs. uniprot
Match: A0A2V3J1B0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1B0_9FLOR)

HSP 1 Score: 157 bits (398), Expect = 1.240e-47
Identity = 80/121 (66.12%), Postives = 91/121 (75.21%), Query Frame = 0 
Query:    1 MQALRATKRYLVNDALRKKLRVTPQVRYAQEGFDRMNIYKDPEKAPKEMEDREYPEWLWRLHDPQPTKEELFREANKLFKEGGYDRVFEHMEESRMKRLFRLQNRDRIKMNNARRKGGQVV 121
            M  L+  +  LV   LR++     QV    +GF RMNIYK+  +APKEM+D EYP+WLWRLHD Q TKEEL REA KLF EGGYDRVFE M ESRMKRLF+L NR+RIKMNNARRKGGQVV
Sbjct:    1 MHLLQIARHRLVTGVLRRQFGSASQVGDTNDGFARMNIYKNGAQAPKEMKDEEYPDWLWRLHDAQATKEELLREARKLFDEGGYDRVFECMHESRMKRLFKLNNRERIKMNNARRKGGQVV 121
The following BLAST results are available for this feature:
BLAST of Gvermi12215.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1B0_9FLOR1.240e-4766.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013870Ribosomal protein L37, mitochondrialPFAMPF08561Ribosomal_L37coord: 36..115
e-value: 5.8E-5
score: 23.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3869397..3869822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12215.t1Gvermi12215.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3869397..3869822 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12215.t1 ID=Gvermi12215.t1|Name=Gvermi12215.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=122bp
MQALRATKRYLVNDALRKKLRVTPQVRYAQEGFDRMNIYKDPEKAPKEME
DREYPEWLWRLHDPQPTKEELFREANKLFKEGGYDRVFEHMEESRMKRLF
RLQNRDRIKMNNARRKGGQVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013870Ribosomal_L37_mit