Gvermi863.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi863.t1
Unique NameGvermi863.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length585
Homology
BLAST of Gvermi863.t1 vs. uniprot
Match: A0A2V3IZ00_9FLOR (Nijmegen breakage syndrome 1 protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ00_9FLOR)

HSP 1 Score: 597 bits (1538), Expect = 3.370e-206
Identity = 325/584 (55.65%), Postives = 407/584 (69.69%), Query Frame = 0
Query:    1 MWYIQDESRKEGPKYWLGGTQTDGRTIGRKMVDIRLKASSVSRVHAKISVHKASFYAPPGSHEQTTAVSVVDFSAYGTFLKYPPNHIASRQEPAGHHRRLNKDDPTEVYEGALLAFGAPSAWWQVCWQHLRVFPSRLTPAARARSEEIGALTSLEVADQMSAKVTHLLTSSCVSTSQNFLLMLARNGHVVEPAWLEALLMIVQNACTAISVAESQGIAYTATCLPPEDNYLPPFSDEDVADYAPDVLRNVMKRTQKDKRKNMFKGIVFAFEGQDRSTWWAQIVESLGGDTVLTSVLSERPELKGRRILFVAN----NEVETIDGAQNISVPFTMEKGIIESILRADLTPIESALDIVRDEIFREKHKRVLNRNNPQKPIASLGGAYVADVATPGPLDAESDVESDASGPTEAFRASSHTNCNKFPKTV---GTEQMTDGSTKPASEKVSKREDVKKK---VQPFNVDVESQQKRIRSIRQRKESGDTNNEHNEAKAPQTENDITMEDGIDFDAEKDNDREFFPVPSAPPGPTLSEAP-SRKGDVRPFRRRKLPSGTVVPLKRVKVLDETNIYNTGGRRLLISRE 573
            MWYIQ+ESRK GPKYWLGGTQ+ GRTIGRK+VDIRL+ASSVSRVHAKI VH ASFYAPPG H+QT+ VSV DFSAYGTFLKYP NHIASR EPAGHHRRLNKDDPT+VYEGALLAFGAPSAWWQVCW  + V PSRL+PA RAR +E+ A TSL+  +QM+  VTHL+TS+CVSTSQ FL MLARNGHVV+ AWLEAL M+V NAC +I  AE++ +A  AT LP E+NYLPPFS +D+++Y PDVL+NV+K TQ+++RKNMF+ IVFAF  ++R  WWA I++ LGG TVL+  + ERPEL+G R+L++ +       E + G       +  EK +IESILRADL PIE ALD+VR E  ++ + R    +N Q+   + GGA   DVATPGPLDAESD ES ASG  +A+R      C +   TV   G E+  +  +  + +K  +   V++     Q    D E  +KR+RS   + E       H   +     N+IT  D   FD    + REFF VP+AP     + A    +GDVRPFR+RKLPS T VPL+RVKV+ E  +YNTG +R L+S++
Sbjct:    1 MWYIQEESRKHGPKYWLGGTQSHGRTIGRKVVDIRLRASSVSRVHAKICVHTASFYAPPGKHKQTSGVSVTDFSAYGTFLKYPQNHIASRDEPAGHHRRLNKDDPTDVYEGALLAFGAPSAWWQVCWWPILVLPSRLSPAERARLDEVSAWTSLQETEQMTDSVTHLITSTCVSTSQKFLTMLARNGHVVQLAWLEALQMVVVNACKSILSAETEDVAIAATHLPIEENYLPPFSQQDLSNYVPDVLQNVLKPTQRERRKNMFRDIVFAFVREERRAWWASIIDHLGGVTVLSRAIPERPELRGSRVLYLKDIAEGRHFERVSG-----FTYMEEKDVIESILRADLIPIEYALDLVRLENPKQCNPRTAQGSNQQRSGQTSGGADTTDVATPGPLDAESDDESYASGAADAYR-----RCGQSKATVMSAGEERAVEARSVGSRDKSRQNPSVQESEQGTQRLTKDRELHRKRLRSASDQGEHVGKTGPHATNQCDDPSNEITPHDVSLFDEISHSKREFFSVPAAPNSEHKAGASVGDEGDVRPFRKRKLPSATSVPLRRVKVVRERRVYNTGAKRRLVSQD 574          
BLAST of Gvermi863.t1 vs. uniprot
Match: R7Q8S1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8S1_CHOCR)

HSP 1 Score: 292 bits (747), Expect = 2.950e-87
Identity = 218/613 (35.56%), Postives = 319/613 (52.04%), Query Frame = 0
Query:    1 MWYIQDESRKEG-------PKYWLGGTQTDGRTIGRKMVDIRLKASSVSRVHAKISVHKASFYAPPGSH----EQTTAVSVVDFSAYGTFLKYPPNHIASRQEPA-GHHRRLNKDDPTEVYEGALLAFGAPSAWWQVCWQHLRVFPSRLTPAARARSEEIGALTSLEVADQMSAKVTHLLTSSCVSTSQNFLLMLARNGHVVEPAWLEALLMIVQNACTAISVAESQGIAYTATCLPPEDNYLPPFSDEDVADYAPDVLRNVMKRTQKDKRKNMFKGIVFAFEGQDRSTWWAQIVESLGGDTVLTSVLSERPELKGRRILFV-----ANNEV-ETIDGAQNISVPFTMEKGIIESILRADLTPIESALDIVRDEIFREKHKRVLNRNNPQKPIASLGGAYVADVATPGPLDAESDVESDASGPTEAFRASSHTNCNKFPKTVGTEQMTDGS-----TKPASEKVSKR-----EDVKKKVQPFNVDVESQ--------QKRIRSIRQRKESGDTNNEHNEAKAPQTENDITME--DGID------------FDAEKDNDREFFPVPSAPPGPTL------SEAPSRKG-DVRPFRRRKLPSGTVVPLKRVKVLD 556
            MWY+  E  KEG       P+YWLGG +  GRTIGRK VDIRL A+SVSR HA++SV KA FY+PP         +T V + D SAYGTF+KYP +H ++R + A GHHRRL+K  PTEV++GA LAFGAP  WW++  ++  + PSRL+ A R R   I  +TS+E+ D  + + THL+T  C S+S  FL +LA   HVV  AW+EAL  +V  +C A + +     A  A   P E  ++PPFS  D A +A + L  ++    K++RK++FK + FAF  ++R + W  I+E LGG T L   ++    ++G  ++FV     A+ +V E +D      +P   E  +  +I+RA+L P+E A  +                 +    +  L  A V DVATPGPLD+ESDV+SD S      R ++             + + DG       KP S + S+R     E  + + +P      S+        +KR R +      G + +E     A +T   ++ E  DG++             +    N+R FF V     G  +      ++A +  G +VRPFRRRKLP+   VP+K V+ +D
Sbjct:    1 MWYVV-ELIKEGDPRPKIRPRYWLGGVEGGGRTIGRKHVDIRLPANSVSRTHARVSVAKAPFYSPPSQSCRRKHHSTCVYIEDSSAYGTFVKYPASHPSNRAQMAVGHHRRLDKSTPTEVWDGAFLAFGAPHDWWRLGRENFVLVPSRLSQAERNRLFVIADITSVEIGDTWTEESTHLITDECSSSSIKFLSVLAEGKHVVTNAWVEALRHVVAESCRANTDSTDVEAAAKAAETPDEKRFVPPFSSADQAAFAAEDLAAILDDPVKERRKHLFKNVNFAFSREERRSRWVAILEGLGGSTTLAKAITSPGPVEG--VVFVQGEHGASKKVHEPVDTTGRTFLP---ESALAAAIIRANLMPLELACTVPV---------------SAASSLIKLNAAEVTDVATPGPLDSESDVDSDESDTANERRQATR---RPIVPMNPDDSVADGDGNASVAKPKSLRSSERGALSAEGDRAEGKPATASEPSRTTASNVAAKKRARPV-----PGSSLDESELPPAKRTAALVSEEPADGVEKVQATSSVVAEQINNSDFNERSFFSVGELTSGAHVVGGSIEAKASAVSGANVRPFRRRKLPNAKAVPVKLVRYVD 584          
The following BLAST results are available for this feature:
BLAST of Gvermi863.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IZ00_9FLOR3.370e-20655.65Nijmegen breakage syndrome 1 protein n=1 Tax=Graci... [more]
R7Q8S1_CHOCR2.950e-8735.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.200.20coord: 16..129
e-value: 4.2E-9
score: 38.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..539
NoneNo IPR availableCDDcd00027BRCTcoord: 130..197
e-value: 3.21849E-5
score: 40.0377
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 135..201
e-value: 5.4E-6
score: 28.7
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 131..198
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 26..117
e-value: 1.5E-6
score: 28.4
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 24..80
score: 8.2899
IPR000253Forkhead-associated (FHA) domainCDDcd00060FHAcoord: 26..120
e-value: 3.30611E-5
score: 41.2178
IPR040227Nibrin-relatedPANTHERPTHR12162NIBRIN-RELATEDcoord: 1..491
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 21..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2952contigScGOVlb_2952:691015..692769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi863.t1Gvermi863.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2952 691015..692769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi863.t1 ID=Gvermi863.t1|Name=Gvermi863.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=585bp
MWYIQDESRKEGPKYWLGGTQTDGRTIGRKMVDIRLKASSVSRVHAKISV
HKASFYAPPGSHEQTTAVSVVDFSAYGTFLKYPPNHIASRQEPAGHHRRL
NKDDPTEVYEGALLAFGAPSAWWQVCWQHLRVFPSRLTPAARARSEEIGA
LTSLEVADQMSAKVTHLLTSSCVSTSQNFLLMLARNGHVVEPAWLEALLM
IVQNACTAISVAESQGIAYTATCLPPEDNYLPPFSDEDVADYAPDVLRNV
MKRTQKDKRKNMFKGIVFAFEGQDRSTWWAQIVESLGGDTVLTSVLSERP
ELKGRRILFVANNEVETIDGAQNISVPFTMEKGIIESILRADLTPIESAL
DIVRDEIFREKHKRVLNRNNPQKPIASLGGAYVADVATPGPLDAESDVES
DASGPTEAFRASSHTNCNKFPKTVGTEQMTDGSTKPASEKVSKREDVKKK
VQPFNVDVESQQKRIRSIRQRKESGDTNNEHNEAKAPQTENDITMEDGID
FDAEKDNDREFFPVPSAPPGPTLSEAPSRKGDVRPFRRRKLPSGTVVPLK
RVKVLDETNIYNTGGRRLLISREDDDNAHSEANE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR000253FHA_dom
IPR040227Nibrin-rel
IPR008984SMAD_FHA_dom_sf