Gvermi7029.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7029.t1
Unique NameGvermi7029.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length355
Homology
BLAST of Gvermi7029.t1 vs. uniprot
Match: A0A2V3ITZ0_9FLOR (Hexuronic acid methyltransferase AglP n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITZ0_9FLOR)

HSP 1 Score: 441 bits (1135), Expect = 2.300e-152
Identity = 224/355 (63.10%), Postives = 278/355 (78.31%), Query Frame = 0
Query:    1 MKSLKNEPTQATTRRIT-ENILKSFSKLSTSTLLVFRRKSRAVAVLVVIACTIMTIALVIHNDLLPTRGTEQMSCYSKSIVRSCDPNPSYGLGRSYDARVRGVNVSYAAWTEDKHFQHEVVSLRTHEAVRMMSKLKRAATLLDVGANMGKVTFPTLAMAQTHTVIAVEPVAFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMNIFVPEGREDNAALNEQAATANVGGKDRGERVNLLTGDKLLRDGGFKPDLIKIDTQGHELFVLRGLRGYMAGAKARELVIMAESDPKLMQKSGVNPKDIYQLMVVELGYNAYCRPEIRVEDERFVVKGLPLSYEMYPPGGCRDIFYYKS 354
            MKS K E  + +TR       ++  SK   + LL  R  +R +A+L  + C ++ ++ V    + P         YS+S++R C P+P++G+G +++ARVRGVNVS+AAWT ++  + +VV+LRTHEAVR+M KLKRA TLLDVGAN+GKVTFPTLAMAQTHTVIAVEPV  N+D LCMTANLNGWLGHAGFLLLKAA+SD+ GS+ IFVPEGREDN+ALNE AA ANVG  + GE V+++ GD +LR+GGFKPDLIKIDTQGHEL VLRGL+ Y++ AKARE+++MAESDPKLM  SGV+PK+IYQLMVVELGY AYCRP + VEDE+FVVKG PLS   YPPGGCRDIFY+KS
Sbjct:    1 MKSRKIEEKRTSTRTSRGHGGVRILSKRLMTALLNVRSNARTIALLATVVCALLLMSGVDERVMHPYEARPHS--YSRSVIRECHPDPTHGMGHTFEARVRGVNVSFAAWTRNQTNERDVVALRTHEAVRIMGKLKRAGTLLDVGANIGKVTFPTLAMAQTHTVIAVEPVGVNLDQLCMTANLNGWLGHAGFLLLKAAMSDRAGSIEIFVPEGREDNSALNEAAAVANVGKAEHGEVVDVVVGDTVLREGGFKPDLIKIDTQGHELHVLRGLKKYLSQAKAREVLVMAESDPKLMHISGVDPKEIYQLMVVELGYKAYCRPTVDVEDEQFVVKGTPLSRREYPPGGCRDIFYFKS 353          
BLAST of Gvermi7029.t1 vs. uniprot
Match: A0A836BND2_9CHLO (Methyltransf_21 domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BND2_9CHLO)

HSP 1 Score: 123 bits (309), Expect = 1.650e-29
Identity = 89/238 (37.39%), Postives = 123/238 (51.68%), Query Frame = 0
Query:  133 KLKRAATLLDVGANMGKVTFPTLA-MAQTHTVIAVEPVAFNIDHLCMTANLNGW-LGHAG--FLLLKAALSDKEGSMNIFVPEGREDNAALNEQAATANVGGKDRGERVNLLTGDKLLRD---------GGFKPDLIKIDTQGHELFVLRGLRGYMAGAKARELVIMAESDPKLMQKSGVNPKDIYQLMVVELGYNAYCRPEIRVE----DERFVVKGLPLSYEMYPPGGCRDIFYYK 353
            K K  +  +DVGAN+G+ + P +      H+V+A+EPV  N++ +C     N   LG AG  + L+  A S   G + I VP GR DNAA++ +AA  NVGG    ER+     D  L           GG K   IKIDTQGHE +VL+GL   ++  K  +L I AE+DP LM  +GVNP ++Y  M    G+ AYC  ++ V      E   V G   + E      C D+F+ K
Sbjct:   29 KFKVPSLFVDVGANIGRTSVPIVTNTGAAHSVVAIEPVRSNLNFICQDLFFNAIPLGGAGARYHLVAGAASAAWGEIQIHVPIGRGDNAAISAEAAVKNVGGAAEAERITTFPLDDYLAQLRRHRAIPVGGLKG--IKIDTQGHEYYVLKGLNHTLSTVK--QLAIYAENDPGLMAAAGVNPSEMYAYMRGH-GFKAYCYADVSVTTVDGQEVIAVSG---NEEAGDSIHCGDMFWIK 258          
BLAST of Gvermi7029.t1 vs. uniprot
Match: A0A7S2KEN7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KEN7_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.080e-18
Identity = 71/236 (30.08%), Postives = 119/236 (50.42%), Query Frame = 0
Query:  108 AWTEDKHFQH-EVVSLRTHEAVRMMSKL-----------KRAATLLDVGANMGKVTFPTLAMAQTHTVIAVEPVAFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMNIFVPEGREDNAALNEQAATANVGGKDRGERVNLLTGDKLLRDGGFKPDL------IKIDTQGHELFVLRGLRGYMAGAKARE------LVIMAESDPKLMQKSGVNPKDIYQLMVVELGYNAYCR 319
            ++ ED   Q  ++ +L++H    + +KL            R  T+LD+GANMG    P  +      V+A EP+  NI+ L     +NG +      L++ A++++ G + I+ P GR DN AL+ + +T NVGG    E+V  +  D  + +     DL      +KIDTQGHEL VL+G++ +++   + E       V++AE    L + +G +P ++   M   LGY   C+
Sbjct:   90 SYAEDIRSQKWDLQALKSHRTQGVATKLCGYGYDKYFDGARGYTMLDIGANMGLSLMPYYSKGWK--VVAFEPIKDNINTLRRNLFING-ITEDQVALVEGAVTNQSGILEIYAPRGRTDNTALSRKGSTLNVGGDVDVEKVTAIEIDTYINNA-VSSDLRRNIMLVKIDTQGHELNVLQGMKSFLSAPPSNEDLGGWSFVVVAEYHVGLQKAAGHDPNEVLNFMR-SLGYEVRCK 320          
BLAST of Gvermi7029.t1 vs. uniprot
Match: A0A836C407_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C407_9CHLO)

HSP 1 Score: 90.9 bits (224), Expect = 4.450e-18
Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 0
Query:  193 LLKAALSDKEGSMNIFVPEGREDNAALNEQAATANVGGKDRGERVNLLTGDKLLRD---------GGFKPDLIKIDTQGHELFVLRGLRGYMAGAKARELVIMAESDPKLMQKSGVNPKDIYQLMVVELGYNAYCRPEIRVED 326
            L+  A S   G + I VPEGR DNAA++  AAT NVGGK + E V     D  L +         GG K   IKIDTQGHE +V++GL   +A A+  +LV+ AE+  +L + +GV P ++Y  M    G+  YC  +I V +
Sbjct:   21 LIAGAASAGWGQVEIHVPEGRGDNAAISAVAATKNVGGKSKPEEVITFPMDDHLANMRRHRSVPAGGLKG--IKIDTQGHEFYVIKGLNHTLAAAQ--QLVVFAENAVELTEAAGVKPSEVYSYMRGH-GFRGYCEVDIEVSE 158          
BLAST of Gvermi7029.t1 vs. uniprot
Match: A0A2V9KDA5_9BACT (Methyltransf_21 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9KDA5_9BACT)

HSP 1 Score: 69.7 bits (169), Expect = 7.280e-10
Identity = 61/182 (33.52%), Postives = 82/182 (45.05%), Query Frame = 0
Query:  129 RMMSKLKRAATLLDVGANMG-KVTFPTLAMAQTHTVIAVEPVAFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMNIFVPEGREDNAALNEQAATANVGGKDRGERVNLLTGDKLLRDGGFK-PDLIKIDTQGHELFVLRGLRGYMAGAKARELVIMAESDPKLMQKSGVNPKDIYQLM 308
            R++S LK    + DVGANMG    F   A+     +IA EP     + L    +LNG      F L     S     +           A L+E    A  G     + V ++ GD+L+       P L+KID +GHE  VLRGLRG +A       V+  E  PKL+ K GVNP+ I  L+
Sbjct:   77 RLVSTLKTGDVVYDVGANMGLHSVFFGQAVGPAGQIIAFEPEPHYCERLRSNVSLNGLSNVRIFPLALGEHSYASELLPAVRGLASPRLAELSEAQTRARAG-----QEVRVIEGDRLVETEKLPVPRLVKIDVEGHEYAVLRGLRGTLANPGCE--VVCCEVHPKLLPK-GVNPEKIVSLV 250          
BLAST of Gvermi7029.t1 vs. uniprot
Match: UPI00094D03C4 (FkbM family methyltransferase n=1 Tax=Prochlorococcus marinus TaxID=1219 RepID=UPI00094D03C4)

HSP 1 Score: 67.8 bits (164), Expect = 3.190e-9
Identity = 62/201 (30.85%), Postives = 101/201 (50.25%), Query Frame = 0
Query:  140 LLDVGANMGKVTFPTLAMAQTH-TVIAVEPVAFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMNIFVPEGREDNAALNEQAATANVGGKDRGERVNLLTGDKLLRDGGFKP-DLIKIDTQGHELFVLRGLRGYMAGAKARELVIMAESDPKLMQKSGVNPKDIY------QLMVVELGYNAYCRPEIRVEDERFVVK 332
            +LD+GAN+G  T     +A  + TVIA+EP   +  +L  + N   +     F L   A SD +  + +++ +   DN   N   +T     K +   V  LT D+LL+    +  DLIKID QG+E  VL+G+R  +  +K  +L+I++E  PK + ++G NPK+        Q  + EL  N         +D++F+ K
Sbjct:   75 ILDIGANIGYYTALFSQLAGVNGTVIAIEPDEESYKYLTKSVNTFNYKNVFSFRL---AASDTKQKLPLYISK---DNRGDNRLYSTNK---KRKSIIVECLTVDELLKKNKIESLDLIKIDVQGYEPKVLKGMRNIVKSSK--KLIILSEFWPKGILEAGENPKEFLATLRKMQFQLFELKKNGSLILLKPCDDQQFINK 264          
BLAST of Gvermi7029.t1 vs. uniprot
Match: A0A3P3RFY7_9EURY (FkbM family methyltransferase n=2 Tax=Halobacteriaceae TaxID=2236 RepID=A0A3P3RFY7_9EURY)

HSP 1 Score: 67.4 bits (163), Expect = 5.060e-9
Identity = 55/179 (30.73%), Postives = 87/179 (48.60%), Query Frame = 0
Query:  130 MMSKLKRAATLLDVGANMGKVTFPTLAMAQTHTVIAVEPVAFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMNI---FVPEGREDNAALNEQAATANVGGKDRGERVNLLTGDKLLRDGGFKP-DLIKIDTQGHELFVLRGLRGYMAGAKARELVIMAESDPKLMQKSGVNPKDI 304
            ++++L+ + T+ D+GA +G  T P  +   T +V+  EP + N   L    NL        + +   ALSD +G+  +   FV  G    A  +  ++  N      G  V    GD L++D G+ P D+IKID QG EL VLRGLRG +   ++  L    E  P   ++ G   ++I
Sbjct:  102 LLAELRGSETVWDIGACIGTYTCPVASTLTTGSVVGFEPESTNRSRL--RRNLERNTLTTDWTVSSIALSDHDGACTLSSEFVAAG----AGHHYLSSVPN------GSTVETKRGDSLIKDEGYTPPDVIKIDVQGAELCVLRGLRGVLTEVRSLYL----EVHPSKCRRYGTTAEEI 264          
BLAST of Gvermi7029.t1 vs. uniprot
Match: UPI001E418097 (FkbM family methyltransferase n=2 Tax=unclassified Pedobacter TaxID=2628915 RepID=UPI001E418097)

HSP 1 Score: 66.6 bits (161), Expect = 6.070e-9
Identity = 60/201 (29.85%), Postives = 89/201 (44.28%), Query Frame = 0
Query:  124 THEAVRMMSKLKRAATLLDVGANMGKVTFPTLAMAQT----HTVIAVEPVAFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMNIFVPEGREDNAALN--EQAATANVGGKDRGERVNLLTGDKLLRDGGF-KPDLIKIDTQGHELFVLRGLRGYMAGAKARELVIMAESDPKLMQKSGVNPKDIYQLMVVELGYNAY 317
            T+   +  + +K+   +LDVGAN+G   F T+  A+       V A EP+  N   L     LN +   +  + +  AL D   S+NI + E + +  A N  E      V        +  + GD  L+  G  K D IKID +G+EL VL+GL   M   K+   +I+ E D     K   N K I   ++  L Y  Y
Sbjct:   43 TYLKTQFNNLIKQGDIVLDVGANIG---FHTMYFAELVGKQGKVFAFEPIPINYHALQENLKLNEF---SQIITVNKALGDINSSLNIHIDENKTNPGAFNLLESGIKNTV--------IECVRGDDFLKTNGIDKVDFIKIDVEGYELEVLKGL---MESIKSMMPIIIFEYDDLYQSKLNANSKSILHFLI-GLNYGLY 225          
BLAST of Gvermi7029.t1 vs. uniprot
Match: A0A7C3YKW3_9BACT (FkbM family methyltransferase n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7C3YKW3_9BACT)

HSP 1 Score: 65.9 bits (159), Expect = 1.420e-8
Identity = 59/189 (31.22%), Postives = 90/189 (47.62%), Query Frame = 0
Query:  125 HEAVRMMSK-LKRAATLLDVGANMGKVTFPTLA-MAQTHTVIAVEPVAFNIDHLCMTANLNGWLGHAGFLLL--KAALSDKEGSMNIFVPEGREDNAALNEQAATANVGGKDRGERVNLLT-GDKLLRDGGFKPDLIKIDTQGHELFVLRGLRGYMAGAKARELVIMAESDPKLMQKSGVNPKDIYQLM 308
            H+ VR++ K LK+  T +DVGAN+G ++      + QT  + + EPV      L   A++N      GF ++    AL + EGS NI V            Q   +N   K+    V ++   D ++ +   K  +IKID +G+E FVL+GL         R L I+ E  PK  Q  G+  KD++  M
Sbjct:   65 HQIVRLIKKYLKKGDTFIDVGANIGFISAVAAGCVGQTGQIHSFEPVPSYFSRLKQMADMN-----KGFNIIVNSYALGEHEGSSNIDVRGNANIGWNTMVQGFMSN---KEYSLEVKVIRLDDYIINNKLSKIKMIKIDVEGYEFFVLKGLNKLFDSTSYRPL-ILCEIAPKAYQILGLEIKDLFLYM 244          
BLAST of Gvermi7029.t1 vs. uniprot
Match: A0A557S4T9_9GAMM (FkbM family methyltransferase n=1 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=A0A557S4T9_9GAMM)

HSP 1 Score: 65.9 bits (159), Expect = 1.480e-8
Identity = 56/194 (28.87%), Postives = 97/194 (50.00%), Query Frame = 0
Query:  130 MMSKLKRAATLLDVGANMGKVTFPTLAMAQ----THTVIAVEPVAFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMNIFVPEGREDNAALNEQAATANVG-GKDRGERVNLLTGDKLLRDGGF-KPDLIKIDTQGHELFVLRGLRGYMAGAKARELVIMAESDPKLMQKSGVNPKDIYQLMVVELGYNAY 317
            M+++++    +LD+G + G   + TL  A+    T  V + EP   N   L      NG+       L    +SDK G  ++++P+   DN       A+++   G+   + +N    D+  ++ G  K DLIKID +GHE  VLRGL  Y++    +   +  E +   +Q++G +P++I+Q M  +L Y AY
Sbjct:   73 MINRIQPGQVILDIGGHAG---YYTLLFAKYTGNTGQVFSFEPNPSNYAILEKNIQRNGF---TNIELRAEIVSDKAGQTSLYLPDS--DNTGNGSVYASSDTAFGQIEVQAINP---DQFFQEKGIAKIDLIKIDVEGHEENVLRGLTHYLSLPADQAPEVFVEVNELTLQRAGKSPREIFQTMW-DLDYTAY 254          
The following BLAST results are available for this feature:
BLAST of Gvermi7029.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITZ0_9FLOR2.300e-15263.10Hexuronic acid methyltransferase AglP n=1 Tax=Grac... [more]
A0A836BND2_9CHLO1.650e-2937.39Methyltransf_21 domain-containing protein n=1 Tax=... [more]
A0A7S2KEN7_9STRA1.080e-1830.08Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A836C407_9CHLO4.450e-1840.56Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A2V9KDA5_9BACT7.280e-1033.52Methyltransf_21 domain-containing protein n=1 Tax=... [more]
UPI00094D03C43.190e-930.85FkbM family methyltransferase n=1 Tax=Prochlorococ... [more]
A0A3P3RFY7_9EURY5.060e-930.73FkbM family methyltransferase n=2 Tax=Halobacteria... [more]
UPI001E4180976.070e-929.85FkbM family methyltransferase n=2 Tax=unclassified... [more]
A0A7C3YKW3_9BACT1.420e-831.22FkbM family methyltransferase n=1 Tax=Candidatus P... [more]
A0A557S4T9_9GAMM1.480e-828.87FkbM family methyltransferase n=1 Tax=Sedimenticol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 127..319
e-value: 9.4E-26
score: 92.4
NoneNo IPR availablePANTHERPTHR34203METHYLTRANSFERASE, FKBM FAMILY PROTEINcoord: 125..317
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..354
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..59
NoneNo IPR availableTMHMMTMhelixcoord: 41..60
IPR006342Methyltransferase FkbMPFAMPF05050Methyltransf_21coord: 142..272
e-value: 9.2E-8
score: 32.3
IPR006342Methyltransferase FkbMTIGRFAMTIGR01444TIGR01444coord: 139..284
e-value: 2.5E-22
score: 77.8
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 110..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1029884..1030948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7029.t1Gvermi7029.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1029884..1030948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7029.t1 ID=Gvermi7029.t1|Name=Gvermi7029.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=355bp
MKSLKNEPTQATTRRITENILKSFSKLSTSTLLVFRRKSRAVAVLVVIAC
TIMTIALVIHNDLLPTRGTEQMSCYSKSIVRSCDPNPSYGLGRSYDARVR
GVNVSYAAWTEDKHFQHEVVSLRTHEAVRMMSKLKRAATLLDVGANMGKV
TFPTLAMAQTHTVIAVEPVAFNIDHLCMTANLNGWLGHAGFLLLKAALSD
KEGSMNIFVPEGREDNAALNEQAATANVGGKDRGERVNLLTGDKLLRDGG
FKPDLIKIDTQGHELFVLRGLRGYMAGAKARELVIMAESDPKLMQKSGVN
PKDIYQLMVVELGYNAYCRPEIRVEDERFVVKGLPLSYEMYPPGGCRDIF
YYKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006342FkbM_mtfrase
IPR029063SAM-dependent_MTases