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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 65071.PYU1_T007211 |
| PFAMs | CBS,PB1 |
| Max annot lvl | 121069|Pythiales |
| Evalue | 7.72e-31 |
| EggNOG OGs | COG0517@1|root,2QVK2@2759|Eukaryota,1MAE4@121069|Pythiales |
| Description | myosin. Source PGD |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi7078.t1 ID=Gvermi7078.t1|Name=Gvermi7078.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=829bp MSIRSLGDVVSRSGPCVTIREDASVATLAKTLAHGHVDAVAVLSITTSAL VGIATSRDVAKCISRGENMDSTKVSQIMTVRPITLPPSESPASALGLMRE GRFRHIPIVHPENASVLGIVNVLNLAYDAITRLQVSYSMIPSRRGFEFMR AARETIEKPTLRPIVERSHFATLSADHSVVESCETLVRERLAAIVIVDKN NALEGIFTCRDAASRVVAKGLNPYSTLLGQVMTKNPDSAGPDYTILESLQ RMQACGFRHLPVVEDNTRTVVGLVDVLQLASETLLGLQSAADDSSRALSH NPTSSYAQNTVRGRGGITSIFSSLFSNSYAQSEFVPEDHFHRIPALQQPS QRSIPSYYSHPTLSSSSRRHFNYRPTDPSSTLSSTSRGRMIPPDTPVASF KFRDINNEYRRIKVPMNLGPGAYDQFVLDVRRRFAGSNSVGAIKIKYLDE DKDEILISNDEDLESCFEDYLEMRSKTILLRVYEAEHAASSQIQSPVSST PSSVIGSPNQNINGGRSGFSSRSSKAASEDSRDHNTTAAVMRKRASQTIP LTPSQEKGAEAHKRMLDGHNDEAIALYEEALKLDPDNARAQGGRGAARLF SGNSVGAEEDYRAALQMLEEGRGGTVGDLVFQMCIVGLVESLIDQRRYEE AVTAASRIDPNCGNTGCHDAFRDELDSASNAAREALEANEFGDAMSCYSN AIRVESAYLKLMPSESPRASLRLGRAKCYKALEDYDMALEDYEAAVQIEP ESVAGHKGCGKCLAELEQFEKALESYRTAHKLDPADDEVRNEIEMIKRVL PDPLEDKKAEIAKLGALLGGMNLPGKPL* back to topspliced messenger RNA >Gvermi7078.t1 ID=Gvermi7078.t1|Name=Gvermi7078.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2487bp|location=Sequence derived from alignment at ScGOVlb_24229:1522491..1524977- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCCATCCGCTCCCTCGGCGATGTCGTCTCGCGGAGCGGCCCGTGCGT GACCATTCGCGAGGATGCGTCTGTCGCAACGCTTGCAAAGACGCTTGCGC ATGGGCACGTGGATGCCGTCGCAGTTCTTTCCATCACCACCAGCGCCCTC GTCGGTATCGCAACCAGCCGCGATGTCGCCAAGTGCATCTCGAGGGGCGA GAACATGGACAGCACCAAGGTATCGCAGATTATGACCGTGCGACCCATCA CCCTGCCTCCCTCTGAATCGCCTGCAAGCGCCCTTGGCCTCATGCGCGAG GGCCGTTTCCGCCACATCCCGATCGTCCACCCCGAGAATGCCTCAGTGCT GGGCATCGTCAATGTTCTCAATTTGGCTTACGATGCCATCACAAGACTGC AGGTGTCATACTCGATGATTCCCTCCCGCCGCGGCTTTGAATTCATGCGC GCAGCCCGAGAAACAATTGAGAAACCGACCTTGCGGCCCATTGTTGAGCG CTCTCATTTTGCTACACTCAGTGCTGACCACAGCGTGGTAGAGTCCTGCG AAACTCTTGTTCGAGAACGCCTCGCTGCTATTGTCATCGTCGACAAAAAC AACGCCCTTGAAGGCATCTTCACCTGTCGCGATGCTGCAAGCAGGGTCGT TGCCAAAGGCTTGAATCCGTATTCCACTCTGCTCGGGCAAGTCATGACCA AGAATCCCGACTCGGCTGGTCCGGACTACACCATTTTGGAATCGCTACAG CGCATGCAGGCGTGCGGGTTTCGTCATCTGCCAGTCGTCGAGGACAATAC TCGTACTGTTGTGGGGCTGGTGGATGTCCTTCAATTGGCCAGCGAAACGT TACTGGGTCTCCAAAGTGCCGCCGATGATTCTTCTCGCGCTCTATCTCAC AACCCTACATCATCATACGCTCAAAATACCGTTCGGGGGCGAGGTGGTAT CACCAGTATCTTTAGTAGTTTGTTTTCCAACTCGTACGCGCAGAGCGAAT TCGTTCCAGAGGACCATTTCCACCGCATTCCTGCTCTACAGCAGCCATCG CAGCGAAGTATTCCAAGCTACTACTCCCATCCAACGCTTTCATCATCCTC ACGAAGGCACTTTAACTATCGTCCTACGGACCCCTCCAGCACCCTCTCTT CAACCTCTCGTGGCCGCATGATCCCTCCAGACACCCCGGTCGCATCATTC AAGTTCAGAGATATAAATAACGAATACCGGAGGATCAAGGTTCCGATGAA TTTAGGGCCCGGTGCGTATGATCAGTTTGTCCTGGATGTTCGACGTCGGT TTGCGGGTTCAAATAGCGTTGGTGCCATCAAGATCAAGTATCTTGACGAG GATAAAGACGAAATTCTTATTTCAAATGACGAAGATTTGGAGTCCTGCTT TGAAGATTACCTTGAGATGCGGAGCAAAACTATACTTTTAAGAGTGTACG AAGCAGAACATGCGGCCTCGAGCCAGATACAATCCCCTGTCTCTTCAACC CCGAGTTCAGTCATTGGCAGTCCAAATCAAAATATTAACGGCGGTAGAAG TGGATTCTCATCGAGATCTTCCAAGGCAGCCTCAGAGGATTCGCGGGATC ATAATACCACAGCGGCTGTGATGAGAAAACGAGCTTCCCAAACAATTCCT CTAACGCCCTCTCAGGAGAAAGGTGCGGAAGCTCACAAGAGAATGCTTGA TGGTCATAATGATGAAGCGATAGCTTTGTATGAAGAAGCTTTGAAGTTAG ACCCTGACAACGCAAGAGCGCAAGGCGGAAGAGGCGCAGCACGATTATTC AGTGGAAATTCAGTTGGAGCTGAAGAAGATTACAGAGCGGCTTTGCAAAT GCTTGAAGAAGGAAGAGGCGGAACTGTCGGTGATCTCGTATTCCAGATGT GTATTGTGGGGCTTGTCGAATCTTTAATAGATCAAAGAAGATATGAAGAG GCCGTCACCGCAGCTTCGAGAATCGACCCGAACTGTGGGAATACTGGATG CCACGACGCGTTCCGTGACGAACTTGACTCTGCCAGCAATGCAGCGCGAG AAGCTCTTGAAGCAAATGAATTTGGGGATGCCATGAGCTGCTACTCGAAC GCGATTCGGGTTGAATCTGCATATTTGAAACTGATGCCAAGCGAATCTCC ACGGGCATCTTTGCGATTAGGAAGGGCGAAGTGCTACAAAGCATTGGAAG ACTATGATATGGCTTTAGAAGATTACGAGGCCGCGGTGCAAATTGAACCC GAAAGTGTTGCCGGTCACAAGGGATGTGGAAAATGTCTGGCTGAGTTAGA ACAGTTTGAGAAAGCTCTGGAGTCATACCGCACAGCCCACAAGCTAGACC CTGCGGATGACGAAGTGAGGAACGAGATTGAGATGATCAAGCGTGTTCTC CCTGACCCCTTGGAGGACAAGAAAGCTGAAATAGCGAAACTCGGGGCATT GTTAGGCGGCATGAATCTGCCAGGAAAACCATTGTAA back to topprotein sequence of Gvermi7078.t1 >Gvermi7078.t1 ID=Gvermi7078.t1|Name=Gvermi7078.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=829bp
MSIRSLGDVVSRSGPCVTIREDASVATLAKTLAHGHVDAVAVLSITTSAL VGIATSRDVAKCISRGENMDSTKVSQIMTVRPITLPPSESPASALGLMRE GRFRHIPIVHPENASVLGIVNVLNLAYDAITRLQVSYSMIPSRRGFEFMR AARETIEKPTLRPIVERSHFATLSADHSVVESCETLVRERLAAIVIVDKN NALEGIFTCRDAASRVVAKGLNPYSTLLGQVMTKNPDSAGPDYTILESLQ RMQACGFRHLPVVEDNTRTVVGLVDVLQLASETLLGLQSAADDSSRALSH NPTSSYAQNTVRGRGGITSIFSSLFSNSYAQSEFVPEDHFHRIPALQQPS QRSIPSYYSHPTLSSSSRRHFNYRPTDPSSTLSSTSRGRMIPPDTPVASF KFRDINNEYRRIKVPMNLGPGAYDQFVLDVRRRFAGSNSVGAIKIKYLDE DKDEILISNDEDLESCFEDYLEMRSKTILLRVYEAEHAASSQIQSPVSST PSSVIGSPNQNINGGRSGFSSRSSKAASEDSRDHNTTAAVMRKRASQTIP LTPSQEKGAEAHKRMLDGHNDEAIALYEEALKLDPDNARAQGGRGAARLF SGNSVGAEEDYRAALQMLEEGRGGTVGDLVFQMCIVGLVESLIDQRRYEE AVTAASRIDPNCGNTGCHDAFRDELDSASNAAREALEANEFGDAMSCYSN AIRVESAYLKLMPSESPRASLRLGRAKCYKALEDYDMALEDYEAAVQIEP ESVAGHKGCGKCLAELEQFEKALESYRTAHKLDPADDEVRNEIEMIKRVL PDPLEDKKAEIAKLGALLGGMNLPGKPL* back to topmRNA from alignment at ScGOVlb_24229:1522491..1524977- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi7078.t1 ID=Gvermi7078.t1|Name=Gvermi7078.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2487bp|location=Sequence derived from alignment at ScGOVlb_24229:1522491..1524977- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCCATCCGCTCCCTCGGCGATGTCGTCTCGCGGAGCGGCCCGTGCGT
GACCATTCGCGAGGATGCGTCTGTCGCAACGCTTGCAAAGACGCTTGCGC
ATGGGCACGTGGATGCCGTCGCAGTTCTTTCCATCACCACCAGCGCCCTC
GTCGGTATCGCAACCAGCCGCGATGTCGCCAAGTGCATCTCGAGGGGCGA
GAACATGGACAGCACCAAGGTATCGCAGATTATGACCGTGCGACCCATCA
CCCTGCCTCCCTCTGAATCGCCTGCAAGCGCCCTTGGCCTCATGCGCGAG
GGCCGTTTCCGCCACATCCCGATCGTCCACCCCGAGAATGCCTCAGTGCT
GGGCATCGTCAATGTTCTCAATTTGGCTTACGATGCCATCACAAGACTGC
AGGTGTCATACTCGATGATTCCCTCCCGCCGCGGCTTTGAATTCATGCGC
GCAGCCCGAGAAACAATTGAGAAACCGACCTTGCGGCCCATTGTTGAGCG
CTCTCATTTTGCTACACTCAGTGCTGACCACAGCGTGGTAGAGTCCTGCG
AAACTCTTGTTCGAGAACGCCTCGCTGCTATTGTCATCGTCGACAAAAAC
AACGCCCTTGAAGGCATCTTCACCTGTCGCGATGCTGCAAGCAGGGTCGT
TGCCAAAGGCTTGAATCCGTATTCCACTCTGCTCGGGCAAGTCATGACCA
AGAATCCCGACTCGGCTGGTCCGGACTACACCATTTTGGAATCGCTACAG
CGCATGCAGGCGTGCGGGTTTCGTCATCTGCCAGTCGTCGAGGACAATAC
TCGTACTGTTGTGGGGCTGGTGGATGTCCTTCAATTGGCCAGCGAAACGT
TACTGGGTCTCCAAAGTGCCGCCGATGATTCTTCTCGCGCTCTATCTCAC
AACCCTACATCATCATACGCTCAAAATACCGTTCGGGGGCGAGGTGGTAT
CACCAGTATCTTTAGTAGTTTGTTTTCCAACTCGTACGCGCAGAGCGAAT
TCGTTCCAGAGGACCATTTCCACCGCATTCCTGCTCTACAGCAGCCATCG
CAGCGAAGTATTCCAAGCTACTACTCCCATCCAACGCTTTCATCATCCTC
ACGAAGGCACTTTAACTATCGTCCTACGGACCCCTCCAGCACCCTCTCTT
CAACCTCTCGTGGCCGCATGATCCCTCCAGACACCCCGGTCGCATCATTC
AAGTTCAGAGATATAAATAACGAATACCGGAGGATCAAGGTTCCGATGAA
TTTAGGGCCCGGTGCGTATGATCAGTTTGTCCTGGATGTTCGACGTCGGT
TTGCGGGTTCAAATAGCGTTGGTGCCATCAAGATCAAGTATCTTGACGAG
GATAAAGACGAAATTCTTATTTCAAATGACGAAGATTTGGAGTCCTGCTT
TGAAGATTACCTTGAGATGCGGAGCAAAACTATACTTTTAAGAGTGTACG
AAGCAGAACATGCGGCCTCGAGCCAGATACAATCCCCTGTCTCTTCAACC
CCGAGTTCAGTCATTGGCAGTCCAAATCAAAATATTAACGGCGGTAGAAG
TGGATTCTCATCGAGATCTTCCAAGGCAGCCTCAGAGGATTCGCGGGATC
ATAATACCACAGCGGCTGTGATGAGAAAACGAGCTTCCCAAACAATTCCT
CTAACGCCCTCTCAGGAGAAAGGTGCGGAAGCTCACAAGAGAATGCTTGA
TGGTCATAATGATGAAGCGATAGCTTTGTATGAAGAAGCTTTGAAGTTAG
ACCCTGACAACGCAAGAGCGCAAGGCGGAAGAGGCGCAGCACGATTATTC
AGTGGAAATTCAGTTGGAGCTGAAGAAGATTACAGAGCGGCTTTGCAAAT
GCTTGAAGAAGGAAGAGGCGGAACTGTCGGTGATCTCGTATTCCAGATGT
GTATTGTGGGGCTTGTCGAATCTTTAATAGATCAAAGAAGATATGAAGAG
GCCGTCACCGCAGCTTCGAGAATCGACCCGAACTGTGGGAATACTGGATG
CCACGACGCGTTCCGTGACGAACTTGACTCTGCCAGCAATGCAGCGCGAG
AAGCTCTTGAAGCAAATGAATTTGGGGATGCCATGAGCTGCTACTCGAAC
GCGATTCGGGTTGAATCTGCATATTTGAAACTGATGCCAAGCGAATCTCC
ACGGGCATCTTTGCGATTAGGAAGGGCGAAGTGCTACAAAGCATTGGAAG
ACTATGATATGGCTTTAGAAGATTACGAGGCCGCGGTGCAAATTGAACCC
GAAAGTGTTGCCGGTCACAAGGGATGTGGAAAATGTCTGGCTGAGTTAGA
ACAGTTTGAGAAAGCTCTGGAGTCATACCGCACAGCCCACAAGCTAGACC
CTGCGGATGACGAAGTGAGGAACGAGATTGAGATGATCAAGCGTGTTCTC
CCTGACCCCTTGGAGGACAAGAAAGCTGAAATAGCGAAACTCGGGGCATT
GTTAGGCGGCATGAATCTGCCAGGAAAACCATTGTAA back to topCoding sequence (CDS) from alignment at ScGOVlb_24229:1522491..1524977- >Gvermi7078.t1 ID=Gvermi7078.t1|Name=Gvermi7078.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2487bp|location=Sequence derived from alignment at ScGOVlb_24229:1522491..1524977- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTCCATCCGCTCCCTCGGCGATGTCGTCTCGCGGAGCGGCCCGTGCGT GACCATTCGCGAGGATGCGTCTGTCGCAACGCTTGCAAAGACGCTTGCGC ATGGGCACGTGGATGCCGTCGCAGTTCTTTCCATCACCACCAGCGCCCTC GTCGGTATCGCAACCAGCCGCGATGTCGCCAAGTGCATCTCGAGGGGCGA GAACATGGACAGCACCAAGGTATCGCAGATTATGACCGTGCGACCCATCA CCCTGCCTCCCTCTGAATCGCCTGCAAGCGCCCTTGGCCTCATGCGCGAG GGCCGTTTCCGCCACATCCCGATCGTCCACCCCGAGAATGCCTCAGTGCT GGGCATCGTCAATGTTCTCAATTTGGCTTACGATGCCATCACAAGACTGC AGGTGTCATACTCGATGATTCCCTCCCGCCGCGGCTTTGAATTCATGCGC GCAGCCCGAGAAACAATTGAGAAACCGACCTTGCGGCCCATTGTTGAGCG CTCTCATTTTGCTACACTCAGTGCTGACCACAGCGTGGTAGAGTCCTGCG AAACTCTTGTTCGAGAACGCCTCGCTGCTATTGTCATCGTCGACAAAAAC AACGCCCTTGAAGGCATCTTCACCTGTCGCGATGCTGCAAGCAGGGTCGT TGCCAAAGGCTTGAATCCGTATTCCACTCTGCTCGGGCAAGTCATGACCA AGAATCCCGACTCGGCTGGTCCGGACTACACCATTTTGGAATCGCTACAG CGCATGCAGGCGTGCGGGTTTCGTCATCTGCCAGTCGTCGAGGACAATAC TCGTACTGTTGTGGGGCTGGTGGATGTCCTTCAATTGGCCAGCGAAACGT TACTGGGTCTCCAAAGTGCCGCCGATGATTCTTCTCGCGCTCTATCTCAC AACCCTACATCATCATACGCTCAAAATACCGTTCGGGGGCGAGGTGGTAT CACCAGTATCTTTAGTAGTTTGTTTTCCAACTCGTACGCGCAGAGCGAAT TCGTTCCAGAGGACCATTTCCACCGCATTCCTGCTCTACAGCAGCCATCG CAGCGAAGTATTCCAAGCTACTACTCCCATCCAACGCTTTCATCATCCTC ACGAAGGCACTTTAACTATCGTCCTACGGACCCCTCCAGCACCCTCTCTT CAACCTCTCGTGGCCGCATGATCCCTCCAGACACCCCGGTCGCATCATTC AAGTTCAGAGATATAAATAACGAATACCGGAGGATCAAGGTTCCGATGAA TTTAGGGCCCGGTGCGTATGATCAGTTTGTCCTGGATGTTCGACGTCGGT TTGCGGGTTCAAATAGCGTTGGTGCCATCAAGATCAAGTATCTTGACGAG GATAAAGACGAAATTCTTATTTCAAATGACGAAGATTTGGAGTCCTGCTT TGAAGATTACCTTGAGATGCGGAGCAAAACTATACTTTTAAGAGTGTACG AAGCAGAACATGCGGCCTCGAGCCAGATACAATCCCCTGTCTCTTCAACC CCGAGTTCAGTCATTGGCAGTCCAAATCAAAATATTAACGGCGGTAGAAG TGGATTCTCATCGAGATCTTCCAAGGCAGCCTCAGAGGATTCGCGGGATC ATAATACCACAGCGGCTGTGATGAGAAAACGAGCTTCCCAAACAATTCCT CTAACGCCCTCTCAGGAGAAAGGTGCGGAAGCTCACAAGAGAATGCTTGA TGGTCATAATGATGAAGCGATAGCTTTGTATGAAGAAGCTTTGAAGTTAG ACCCTGACAACGCAAGAGCGCAAGGCGGAAGAGGCGCAGCACGATTATTC AGTGGAAATTCAGTTGGAGCTGAAGAAGATTACAGAGCGGCTTTGCAAAT GCTTGAAGAAGGAAGAGGCGGAACTGTCGGTGATCTCGTATTCCAGATGT GTATTGTGGGGCTTGTCGAATCTTTAATAGATCAAAGAAGATATGAAGAG GCCGTCACCGCAGCTTCGAGAATCGACCCGAACTGTGGGAATACTGGATG CCACGACGCGTTCCGTGACGAACTTGACTCTGCCAGCAATGCAGCGCGAG AAGCTCTTGAAGCAAATGAATTTGGGGATGCCATGAGCTGCTACTCGAAC GCGATTCGGGTTGAATCTGCATATTTGAAACTGATGCCAAGCGAATCTCC ACGGGCATCTTTGCGATTAGGAAGGGCGAAGTGCTACAAAGCATTGGAAG ACTATGATATGGCTTTAGAAGATTACGAGGCCGCGGTGCAAATTGAACCC GAAAGTGTTGCCGGTCACAAGGGATGTGGAAAATGTCTGGCTGAGTTAGA ACAGTTTGAGAAAGCTCTGGAGTCATACCGCACAGCCCACAAGCTAGACC CTGCGGATGACGAAGTGAGGAACGAGATTGAGATGATCAAGCGTGTTCTC CCTGACCCCTTGGAGGACAAGAAAGCTGAAATAGCGAAACTCGGGGCATT GTTAGGCGGCATGAATCTGCCAGGAAAACCATTGTAA back to top
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