Gvermi7052.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7052.t1
Unique NameGvermi7052.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1204
Homology
BLAST of Gvermi7052.t1 vs. uniprot
Match: A0A2V3ID37_9FLOR (Kelch domain-containing protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID37_9FLOR)

HSP 1 Score: 790 bits (2040), Expect = 4.500e-264
Identity = 493/1140 (43.25%), Postives = 679/1140 (59.56%), Query Frame = 0
Query:    1 MGVCLAFELSACAGKHLDSSGSAPVKALAPVSNEEASSQKFFPMEGTSAVLISPHRLLVTGGVLQDNRVLPFSVLRHLQLDPHSDHCHRWIKPTLLRPPSQRTSAAKKTRKSE--TAIPVCRMEQTLTMVPDTSKLYLIGGMKVGTKDKGSGCSTVFAFDFNTKTWHSIEPDKPTSRVKSEVQQQLGPRFAHSATYVALTPRCSSSRQKARAKRAPFIYVYGGYTHWDDHAPVPDVHIFDVKKCTWSLVHPASSNVEPPALAYHAASLTPCGKYIAIHGGNDSDFYDNQSISEHLFLFDVQNHKWLQPALHHNSDPPPRARRQHSLVQGVGRHEGSLAMYGGFVVNGTYSKEMFLCKVLEPEHPGERLEVFWESIDVQTTVARPVADDSHYLSEKMLSEKDAAISGGCLVALPQMRKYIMVGGRTGYGVRKAPLMLHPEESDEAAASQSMDTVQRMRALHIAVDR--HAPVASKAAHAPVPTSPDSPQERCNGLNDTPSVPEVADEIEQSAGESASPIASAHEIPRLSSVQRTSSEKSLPPGVGTRG-KASIGRLGSDRFRKRKPRSSNDESNSKPQKPGLLAVACDAVPPSIRAPDPDKENDPVQEADSLLLKSRRAGTRKAEAITGDVSHPLKKRRLRSDTKRAE-EKQPGEENHIISPAPLVHDPIK--EDDGVDGQDAVLQQSLSCRSEFIAPSTLKRAGRNLTAKGTKGGG------RVSAIRQKQAELEASMNKNKDLEETIRRLECDMKSLADENTVLKVGNGQFKADNKELNVQIQKLLQEVQSLRNQLSAHDASDAGVDGASAPVRGGGASAATSVEVSGEEHIRALQGSAGVGGTEEVKKLRSKAEGLQEENTAINCEREAIMQELRESLAERREVERELNHTRNLLEQSRIECGKERTRANECEKELRECFDSGERAKNKLESAESDILVLKSKNETLNLSLLEERNKVCEVARERAASEKEIGRLHTQLCEQQKNFGNHNGKQRLLQVDLEAEKMRCEELNKLVDQNTEKVRKLEERCAQVVAERDTLHCKLTSRVREHEAALQVADKDKMSMDKLRRKLCDEGIENRRLKRELDVRTKECAKVKAKYVGVQVSLKKVLWPSIARLSKEFEEVTRECEAGDGSDGLVV 1126
            MGVC  F+L  CAGK L SSGS+   A   VS EEA++  + P EG SA LISPHRLLVTGGVL D RVLPF+VLR+L LDP SDH H+W KPTLL+ PSQR + AK+ R++E  T IPVCRME TLTMVPD S+LYLIGGMKVG +D G  C+T+FAFD  +K+W ++EP+KP+ RVK +    LGPRFAHSATYV  TP+CSS+RQ+ARAK +P+IYVYGG+   DDH PV D+H+FDVK C W+L  PA   +EPP  AYHAA+LTP GKYIA+HGGN SD  D  +++E L+LFD+Q  KWL+P +H NSD  P  RR+HSLV GVGRH GSL +YGG+++N  +S +M+LCK+LEP+   +RLEV WE I +   V+RP+  DS + SEK  SE  AA+SGGCLVA+P+M KY+MVGGR GYG+R APLML P ESDE   SQSM  +  + A   +  R  HA    K A A  P SP SPQE CNGLND P  P +++   +S   S SP     + P  SS+Q+TSSEKS  P   +R  KAS   +G++ FRKRK R++     +K Q       A DA+  S  A   D+E + V+ AD++L +S+R G +  +++  D++ PLKKRR RS TK  + EK+   +  I+ P  + HD ++  E+   D  D V+Q S++ RSEF+APS +KR GR+ TAKG KG G      R +  RQK AELEA   K ++                                                    Q+S+    + G+     P++   A AA   +V G+      + +     +EE++ LR+K  GL+EEN  I  E+E +  +L+E+  E+R  E+ LN  +N LE+ ++ECG+ R      +K++ E   + E  + KL+  E   L+LKS+ E L L ++E +  + + +RE+A  E                                                    + LE++  +++AERDTL  +L+++++EHEAALQV  KDK S++KLRR + D   E +RL+REL    KECA+++++   +Q SLK ++ PS  + ++ F+++ +E +  D     VV
Sbjct:    1 MGVCRYFDLLGCAGKPLGSSGSSAAGAQCQVSAEEAATGPYIPAEGISAALISPHRLLVTGGVLDDERVLPFTVLRYLDLDPRSDHFHKWTKPTLLKTPSQRANTAKRARRAERQTTIPVCRMEHTLTMVPDNSRLYLIGGMKVGGRDGGKACTTIFAFDTRSKSWDNVEPEKPSGRVKEDPDSHLGPRFAHSATYVTYTPKCSSARQQARAKPSPYIYVYGGFKCIDDHLPVADMHVFDVKNCRWTLQRPAP-GIEPPHRAYHAAALTPSGKYIAVHGGNTSDLNDTYAMTEDLYLFDIQAVKWLKPVVHANSDDVPLPRRRHSLVAGVGRHHGSLVLYGGYLLNDRHSNDMYLCKILEPDLAHDRLEVLWERIGLVPDVSRPLPCDSQHNSEKRASES-AAVSGGCLVAIPEMGKYVMVGGRGGYGIRNAPLMLDPGESDEMVISQSMQPIVPIVAERCSRSRLSHA----KPADADAPRSPHSPQEGCNGLNDEPVGPIISEGGRESL-RSHSPAKYVLQAPLPSSLQQTSSEKSPAPVHTSRSRKASPPGIGANDFRKRKLRNAAVVPATKVQNVFAANAAEDAIQASPTARRGDEE-ELVKNADAILRRSKRIG-KITDSVEDDLAPPLKKRRRRSTTKNVDLEKEKDAQGCILDP--VEHDSLEHAENSLDDEADRVVQLSMTSRSEFVAPSDIKRIGRSNTAKGGKGRGKGNGRPRATTARQKTAELEACKKKLEEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQISSQPTKEDGLLSDFDPLQTREAEAAA--KVVGKSKTTTPKSAR----SEEIRTLRTKTAGLREENMEITVEKENLYNDLKEAEDEKRATEKLLNQAKNALERQQLECGRLRKLVENSQKDMNEAVSAKEDIETKLKGTEDKALILKSEVEALKLDVMEHKQTIRDESREKAEWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQYLEDKHVEIMAERDTLQSELSNKMQEHEAALQVTSKDKASLEKLRRNMSDGSFEQKRLQRELVSWKKECARLRSRVQSLQFSLKTMM-PSWTKFTRHFDQIMKEADEMDRGMAEVV 1122          
The following BLAST results are available for this feature:
BLAST of Gvermi7052.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ID37_9FLOR4.500e-26443.25Kelch domain-containing protein 3 n=1 Tax=Gracilar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 911..931
NoneNo IPR availableCOILSCoilCoilcoord: 713..747
NoneNo IPR availableCOILSCoilCoilcoord: 988..1022
NoneNo IPR availableCOILSCoilCoilcoord: 1065..1085
NoneNo IPR availableCOILSCoilCoilcoord: 834..889
NoneNo IPR availableCOILSCoilCoilcoord: 755..789
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 609..649
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1126..1203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 522..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..667
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 549..566
NoneNo IPR availablePANTHERPTHR23244KELCH REPEAT DOMAINcoord: 46..504
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 215..439
e-value: 2.7E-14
score: 54.9
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 98..200
e-value: 1.3E-9
score: 39.9
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 45..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1312233..1315844 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7052.t1Gvermi7052.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1312233..1315844 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7052.t1 ID=Gvermi7052.t1|Name=Gvermi7052.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1204bp
MGVCLAFELSACAGKHLDSSGSAPVKALAPVSNEEASSQKFFPMEGTSAV
LISPHRLLVTGGVLQDNRVLPFSVLRHLQLDPHSDHCHRWIKPTLLRPPS
QRTSAAKKTRKSETAIPVCRMEQTLTMVPDTSKLYLIGGMKVGTKDKGSG
CSTVFAFDFNTKTWHSIEPDKPTSRVKSEVQQQLGPRFAHSATYVALTPR
CSSSRQKARAKRAPFIYVYGGYTHWDDHAPVPDVHIFDVKKCTWSLVHPA
SSNVEPPALAYHAASLTPCGKYIAIHGGNDSDFYDNQSISEHLFLFDVQN
HKWLQPALHHNSDPPPRARRQHSLVQGVGRHEGSLAMYGGFVVNGTYSKE
MFLCKVLEPEHPGERLEVFWESIDVQTTVARPVADDSHYLSEKMLSEKDA
AISGGCLVALPQMRKYIMVGGRTGYGVRKAPLMLHPEESDEAAASQSMDT
VQRMRALHIAVDRHAPVASKAAHAPVPTSPDSPQERCNGLNDTPSVPEVA
DEIEQSAGESASPIASAHEIPRLSSVQRTSSEKSLPPGVGTRGKASIGRL
GSDRFRKRKPRSSNDESNSKPQKPGLLAVACDAVPPSIRAPDPDKENDPV
QEADSLLLKSRRAGTRKAEAITGDVSHPLKKRRLRSDTKRAEEKQPGEEN
HIISPAPLVHDPIKEDDGVDGQDAVLQQSLSCRSEFIAPSTLKRAGRNLT
AKGTKGGGRVSAIRQKQAELEASMNKNKDLEETIRRLECDMKSLADENTV
LKVGNGQFKADNKELNVQIQKLLQEVQSLRNQLSAHDASDAGVDGASAPV
RGGGASAATSVEVSGEEHIRALQGSAGVGGTEEVKKLRSKAEGLQEENTA
INCEREAIMQELRESLAERREVERELNHTRNLLEQSRIECGKERTRANEC
EKELRECFDSGERAKNKLESAESDILVLKSKNETLNLSLLEERNKVCEVA
RERAASEKEIGRLHTQLCEQQKNFGNHNGKQRLLQVDLEAEKMRCEELNK
LVDQNTEKVRKLEERCAQVVAERDTLHCKLTSRVREHEAALQVADKDKMS
MDKLRRKLCDEGIENRRLKRELDVRTKECAKVKAKYVGVQVSLKKVLWPS
IARLSKEFEEVTRECEAGDGSDGLVVWSEVVTGEERREQDDDNNNNNNNN
NNNENGVAVAGGDGACGGERNDEQHGAGEGGDVGAGVKEVAPSDETDDDA
GEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller