Gvermi7026.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7026.t1
Unique NameGvermi7026.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length171
Homology
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BLAST of Gvermi7026.t1 vs. uniprot
Match: A0A2V3J4R0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4R0_9FLOR)

HSP 1 Score: 157 bits (396), Expect = 1.770e-45
Identity = 103/194 (53.09%), Postives = 126/194 (64.95%), Query Frame = 0 
Query:    1 MSLALLGEYDSDSSQQSVADAKQPVHLQPPPDH------SPSITSQAADKSQT--------------PPRMPSPENSKNGQHAQSHVKTT----DADIPAELAAELRLAGHDLADVNFIDVNATINVRVANSNDHIPASALRNTATRLAQQISKSRNVGRMARRKHQITALAADALALQAAHAVLPGSASQRKR 170
            M+L LL +YDSDSS++ ++   +  + QP   H      +P   ++A   ++T               PR P  E   + + A S   T     D  +P +LAAELR AGH  + V+ +DVNAT N+RVANSNDHIP SALRNTATRLA QISKSRNVGR+ARRKHQITALAADALALQAA AVLPGSAS+RKR
Sbjct:    8 MALVLLKQYDSDSSEEHISGEDK--YQQPTTTHILTPIPAPCTENKAHTTAETITTNRAVCTEHKPQHPRAPPAERHLSEKTATSSASTDALSIDHQLPPDLAAELRRAGHHPSQVSIVDVNATTNMRVANSNDHIPPSALRNTATRLAHQISKSRNVGRVARRKHQITALAADALALQAAQAVLPGSASRRKR 199
The following BLAST results are available for this feature:
BLAST of Gvermi7026.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4R0_9FLOR1.770e-4553.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018800Proline-rich protein PRCCPFAMPF10253PRCCcoord: 15..153
e-value: 5.0E-7
score: 30.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:987812..988324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7026.t1Gvermi7026.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 987812..988324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7026.t1 ID=Gvermi7026.t1|Name=Gvermi7026.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=171bp
MSLALLGEYDSDSSQQSVADAKQPVHLQPPPDHSPSITSQAADKSQTPPR
MPSPENSKNGQHAQSHVKTTDADIPAELAAELRLAGHDLADVNFIDVNAT
INVRVANSNDHIPASALRNTATRLAQQISKSRNVGRMARRKHQITALAAD
ALALQAAHAVLPGSASQRKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018800PRCC