Gvermi4338.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi4338.t1
Unique Name	Gvermi4338.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	491

Homology

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BLAST of Gvermi4338.t1 vs. uniprot
Match: A0A2V3ILQ2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILQ2_9FLOR)

HSP 1 Score: 419 bits (1078), Expect = 1.200e-139
Identity = 247/492 (50.20%), Postives = 334/492 (67.89%), Query Frame = 0

Query:    1 MTIREDLVSWIETELPEIKVPCEETLNALTKGKHEKALWEEVTKRVRREKHARKIRSFLSLTAEKKLYEPSKKDQEELDRVLDEIKQIEKETLFLREQLE---EIDDREEGDITTAEVDEAVMDGVLQIVTDQEEELTQLLGLLQRSPWGDGGDSSDSEGEGETDEKQNAVEHAVRKWCKKGAAEWNIAESELQMVLSESWGTRVGSALLSLLHESETSLADIPSTQGSSVRSGSEELVRDAQLRAFSRLRTLEREVRAAEARAKAMKHGVDTSRVLWAQIEAERAVLAFASRPRQMNSGSAAERRARRAVRRGKDVVKELEDCAKELCIGSLAVLQSASKDVADVTRSSMRLERDLPIAADAAEKMLSHVEHELNRGDSENDPRKTLVSVSGSTTEGVESRRIQEARRLELQRRHDESVRTMTGLITRSEILCEQRSRAVEELERTWMPRLREGVQQVELWREEEIVKVTEISQEWSTAPAKEAAPWLLRK 489
            MT+ +DL +WI+ ELP I+VP EETL ALT+ +  K+LW+ V KR R E+HA++ RSFL LT+     E +K  +EEL R+ DE + +E++   LREQLE   E  + ++GD++ +EVD AVM+GVL I+TD+EEELT LLGLLQ+SPWGD  DSS+S    E  E    ++ AVR+WC+KG +EW  AE+EL++ L  SWG  VG +LL+LL+ESE +LA     + SS  +G+EE+ RDAQLRAFSRLRTLERE +AAE R + MK+G+D SRVLWA ++AERA LA A+ PRQ+ SGSAAERRA+RAVRRGK+ VKELE CAKELC GS A+L+SAS D+ DV  +  +LE  L   A  AE +L+ VE E+     E+  +    +V   +    + RR  +A R   Q R     R + GL TR+E+LCEQR+ A++ +E   +P LR  V + +  R+  I  VT+  + W++ PA+EAAPWL  K
Sbjct:    1 MTLHDDLATWIKEELPTIQVPSEETLKALTEREEGKSLWQTVVKRFRTEQHAKEDRSFLVLTSRGDRSETNKSREEELQRIRDETRDVERDIQLLREQLEADAEEANEDDGDLSASEVDNAVMEGVLDIITDREEELTHLLGLLQQSPWGDLDDSSESNSGDEGAEADAGIDQAVRRWCEKGRSEWETAENELRIALESSWGADVGGSLLALLNESEATLAAAAPAEVSSTEAGAEEMARDAQLRAFSRLRTLEREHQAAEERGRTMKNGIDKSRVLWAHVQAERAALASATEPRQIKSGSAAERRAKRAVRRGKEAVKELEGCAKELCTGSFALLKSASDDINDVMTTGKQLESKLSCVASIAEDILNRVETEVGCKAIEHREQAQAKAVETGSNSTADLRR-SDAERWSAQCR-----RVVVGLSTRNEMLCEQRADALQGIEHEVVPVLRAAVNEAKECRDIRIAPVTDEMRNWTSQPAQEAAPWLFVK 486

The following BLAST results are available for this feature:

BLAST of Gvermi4338.t1 vs. uniprot

BLAST of Gvermi4338.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ILQ2_9FLOR	1.200e-139	50.20	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 247..267
None	No IPR available	COILS	Coil	Coil	coord: 71..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 382..397
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..399

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_147	contig	ScGOVlb_147:1272968..1274440 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi4338.t1	Gvermi4338.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_147 1272968..1274440 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi4338.t1 ID=Gvermi4338.t1|Name=Gvermi4338.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=491bp
MTIREDLVSWIETELPEIKVPCEETLNALTKGKHEKALWEEVTKRVRREK
HARKIRSFLSLTAEKKLYEPSKKDQEELDRVLDEIKQIEKETLFLREQLE
EIDDREEGDITTAEVDEAVMDGVLQIVTDQEEELTQLLGLLQRSPWGDGG
DSSDSEGEGETDEKQNAVEHAVRKWCKKGAAEWNIAESELQMVLSESWGT
RVGSALLSLLHESETSLADIPSTQGSSVRSGSEELVRDAQLRAFSRLRTL
EREVRAAEARAKAMKHGVDTSRVLWAQIEAERAVLAFASRPRQMNSGSAA
ERRARRAVRRGKDVVKELEDCAKELCIGSLAVLQSASKDVADVTRSSMRL
ERDLPIAADAAEKMLSHVEHELNRGDSENDPRKTLVSVSGSTTEGVESRR
IQEARRLELQRRHDESVRTMTGLITRSEILCEQRSRAVEELERTWMPRLR
EGVQQVELWREEEIVKVTEISQEWSTAPAKEAAPWLLRKT*