Gvermi5468.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5468.t1 vs. uniprot
Match: A0A2V3IZ60_9FLOR (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ60_9FLOR) HSP 1 Score: 430 bits (1106), Expect = 6.500e-150 Identity = 224/294 (76.19%), Postives = 252/294 (85.71%), Query Frame = 0
Query: 1 MRNAHLVPYVATPENFAYTLALLRNNDNENYLANLLQRRSVSRAHAAIRAFNIELANIRSNVSNEDLGRLRLQFFRSQFADILSNPNPNPASPVLDVLAESISSFRHVNFDMLHTLIDARETDLSYPNFRSLGELQSFGERTQGSLIHLHALLLGGA-RVENTAKTAGAAVGLSIILRGTPAHAASRLSYMPRDLVQRYGVAQSQLISGGQDAVPVFRAVATRARRCLKVAQLRSNLLRQPVKQAFWPLIMADIYLRRLQKAGDNPLDKRLEQGLRTTYPLALQLRLLLARLRG 293
MR+ VPY+ATPEN AYTL LLR NDNENYLANLLQ R+VSR HAAIRA NIELANIR +VSNEDLGRLRLQFFR+QFADILS+PNP P SPVLDVLAESI SF VNF +LHTLIDARETDL YP ++ +LQ+FGERTQG+LIHLHAL LG V + A+ AGAAVGLSI+LRG P+HAASRLSYMPR LVQ++ + QSQLISG DAVPV+RAVA RARRCL+VAQ RS+LLRQPVK+AFWPLIMADIYLRRL+KAGDNP D+ L +GLRTTYPLALQ+RLL +RLR
Sbjct: 1 MRDGSPVPYIATPENLAYTLNLLRTNDNENYLANLLQPRTVSRVHAAIRALNIELANIRFSVSNEDLGRLRLQFFRAQFADILSDPNPTPGSPVLDVLAESIHSFPQVNFRLLHTLIDARETDLGYPYHSTIRDLQTFGERTQGTLIHLHALCLGAEPNVVSIARLAGAAVGLSILLRGAPSHAASRLSYMPRKLVQKHAITQSQLISGEGDAVPVYRAVANRARRCLQVAQARSSLLRQPVKKAFWPLIMADIYLRRLKKAGDNPFDENLAKGLRTTYPLALQMRLLFSRLRS 294
BLAST of Gvermi5468.t1 vs. uniprot
Match: M2XRU3_GALSU (Phytoene synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRU3_GALSU) HSP 1 Score: 146 bits (368), Expect = 2.870e-38 Identity = 98/270 (36.30%), Postives = 149/270 (55.19%), Query Frame = 0
Query: 9 YVATPENFAYTLALLRNNDNENYLANLLQRRSVSRAHAAIRAFNIELANIRSNVSNEDLGRLRLQFFRSQFADILSNPNPNPASPVLDVLAESISSFRHVNFDMLHTLIDARETDLSYPNFRSLGELQSFGERTQGSLIHLHALLLGGAR----VENTAKTAGAAVGLSIILRGTPAHAASRLSYMPRDLVQRYGVAQSQLISG---GQDAVPVFRAVATRARRCLKVAQLRSNLLRQPVKQAFWPLIMADIYLRRLQKAGDNPLDKRLE 271
Y A +F Y L LLR D++ +L NL+Q + RAHAAIRAFN+EL IR V+NEDLGRLR+ FFR + P+ PVLD+L+E+I F ++ L+ ARE DLS PNF+++ E++ F E TQ SL++ + G + V A G A+GL+I+LRGT H SRL Y P++ +Q+Y V G +++ + + ++ A + A+ + + AF + D+YL ++++ LD R+E
Sbjct: 25 YRAQDSSFGYCLDLLRRYDHDQFLVNLVQPNTHRRAHAAIRAFNVELTRIRQIVTNEDLGRLRVTFFREALERAFA-ATPDK-QPVLDLLSEAIVQFG-LSKKWFERLLSAREADLSLPNFQTIQEVEHFTESTQSSLLYAYLETFGKRQLSLPVYQAASHLGQALGLTILLRGTRHHIESRLCYFPKEWIQKYRVDLPLHYRGLWKESNSIGMLQEMSELASYHIATARQYVGDIPPLLFPAFLSSTIVDVYLAKIRRYHYQMLDPRVE 291
BLAST of Gvermi5468.t1 vs. uniprot
Match: A0A7J7INR5_9RHOD (NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INR5_9RHOD) HSP 1 Score: 141 bits (355), Expect = 8.930e-36 Identity = 106/308 (34.42%), Postives = 158/308 (51.30%), Query Frame = 0
Query: 11 ATPENFAYTLALLRNNDNENYLANLLQRRSVSR-AHAAIRAFNIELANIRSNVSNEDLGRLRLQFFRSQFADILSNPNPNPA------SPVLDVLAESISSFRHVNFDMLHTLIDARETDLSYPNFRSLGELQSFGERTQGSLIHLHALLLGG-----------ARVENTAKTAGAAVGLSIILRGTPAHAASRLSYMPRDLVQRYGVAQSQLISG----GQDAVPVFRAVATRARRCLKVAQLRS---NLLRQPVKQAFWPLIMADIYLRRLQKAGDNPLDKRLEQGLRTTYPLALQLRLLLARLRG 293
A ++ + L LR +D NYL NLL SR AHA++ AF+++LA I+ V+NED+GRLRL FFR I + SP L L E+I F + + + L+ ARE DL YP ++ EL + + GS I LHA +L A ++ A G A GL+++LRG P HAA +Y+PRD+++ V+ +L+S + F++VA A L A+ S + + + AF P ++A YLRRL+ +G + D+RL+ + QLRLLL R+ G
Sbjct: 66 AQRSDYEFCLQQLRQSDYGNYLINLLHSSHDSRCAHASLFAFSVQLARIKDAVTNEDMGRLRLSFFRDALQGIYDADHAMARVYGPLQSPTLRALRETIQRFS-LPVEPFNLLLSAREADLRYPQPETVHELVKYAQAAHGSCIALHARVLLATLEKPVEQEALAAIDLFATQIGTASGLAVLLRGAPHHAAKFQTYVPRDIMKACNVSVKELVSQKVSVSSNRKKAFQSVAEMAEEYLNRARRESAAWKCVPRACRLAFLPAVLASAYLRRLRSSGYDVYDRRLQ----LPWTPGTQLRLLLNRMFG 368
BLAST of Gvermi5468.t1 vs. uniprot
Match: M1UVJ5_CYAM1 (Similar to phytoene synthase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UVJ5_CYAM1) HSP 1 Score: 138 bits (348), Expect = 9.670e-35 Identity = 103/310 (33.23%), Postives = 162/310 (52.26%), Query Frame = 0
Query: 11 ATPENFAYTLALLRNNDNENYLANLLQRRSVSR-AHAAIRAFNIELANIRSNVSNEDLGRLRLQFFRSQFADILSNPNPNP------ASPVLDVLAESISSFRHVNFDMLHTLIDARETDLSYPNFRSLGELQSFGERTQGSLIHLHALLLG--GAR-----------VENTAKTAGAAVGLSIILRGTPAHAASRLSYMPRDLVQRYGVAQSQLIS----GGQDAVPVFRAVATRARRCLKVAQLRSNLLRQ---PVKQAFWPLIMADIYLRRLQKAGDNPLDKRLEQGLRTTYPLALQLRLLLARLRG 293
A +++ Y L LR + YL N+L +R AHAA+ AFN++LA I+ +VSNED+GRLRL FFR+ I + +SP L L E+I F + + L ARE DL YP ++ +L + + + GS I LHA +L GA ++ A G A GL+ +LRG P HAA +Y+PRD+++ + ++ +L++ D F+++A A L+ A+ ++ + AF P ++A YLR+L+ +G + D+RL+ + +QLRLLL+RL G
Sbjct: 66 AQRQDYEYCLQQLRQMEYGAYLINVLHAEQRARCAHAALFAFNLQLARIKDSVSNEDMGRLRLSFFRNAVHGIYDGSSAETGVRTSISSPTLRALCETIQRFA-LPVEPFEALFAAREQDLKYPQPHTIQDLVEYTQASHGSCIALHARILHAVGANGEPPKRETAQLLDRVAMDVGTAAGLATLLRGAPYHAARLQTYVPRDVMEAWKISAKELVNLQVQSSVDRRGAFQSIALVAEEYLERARSDKETWKRIPRSCRLAFLPAVLAADYLRKLRASGYDAFDRRLQLPMTP----GIQLRLLLSRLIG 370
BLAST of Gvermi5468.t1 vs. uniprot
Match: A0A3P9BPK9_9CICH (NADH:ubiquinone oxidoreductase complex assembly factor 6 n=10 Tax=Cichlidae TaxID=8113 RepID=A0A3P9BPK9_9CICH) HSP 1 Score: 123 bits (309), Expect = 1.930e-29 Identity = 85/272 (31.25%), Postives = 144/272 (52.94%), Query Frame = 0
Query: 18 YTLALLRNNDNENYLANLLQRRSVSRAHAAIRAFNIELANIRSNVSNEDLGRLRLQFFRSQFADILSNPNPNPASPVLDVLAESISSFRHVNFDMLHTLIDARETDLSYPNFRSLGELQSFGERTQGSLIHLHALLLG--GARVENTAKTAGAAVGLSIILRGTPAHAASRLSYMPRDLVQRYGVAQSQLISGG--QDAVPVFRAVATRARRCLKVAQLRSNLLRQPVKQAFWPLIMADIYLRRLQKAGDNPLDKRLEQGLRTTYPLALQLR 285
Y L ++R+ D + +L++LL R+ A+RAFN+ELA ++ +VS + +G +R+QF+++ +I N PN PV L ++ + + +L +I RE DL +R+L EL+++ E TQ SLI+L LG + ++ A G A G+ LR TP H++ R Y+P D+ +G +Q I G Q+ V +A++A L+ AQ S+ + AF P ++ + YL R+++ + K L Q P+ L +R
Sbjct: 58 YCLDMVRSRDYDGFLSSLLLPEKARRSSLALRAFNVELAQVKDSVSQKTIGLMRMQFWKTAIEEIYRNEPPN--QPVSTELWRAVRTHKLTKRWLLR-IITEREKDLDDRAYRNLQELEAYSENTQSSLIYLLLECLGVKNVQADHAASHIGKAQGIITCLRATPYHSSRRKVYLPMDICMLHGASQEDFIRGSREQNIRDVVYDIASQAHVHLQHAQSFSHNVPAAATPAFLPTVVLEDYLHRVRRVDFDVFHKSL-QNRNPLLPIQLYIR 325
BLAST of Gvermi5468.t1 vs. uniprot
Match: UPI000D72E97F (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like isoform X1 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72E97F) HSP 1 Score: 122 bits (307), Expect = 3.280e-29 Identity = 89/264 (33.71%), Postives = 139/264 (52.65%), Query Frame = 0
Query: 15 NFAYTLALLRNNDNENYLANLLQRRSVSRAHAAIRAFNIELANIRSNVSNEDLGRLRLQFFRSQFADILSNPNPN--PASPVLDVLAESISSFRHVNFDMLHTLIDARETDLSYPNFRSLGELQSFGERTQGSLIHLHALLLGGARV--ENTAKTAGAAVGLSIILRGTPAHAASRLSYMPRDLVQRYGVAQSQLISGG--QDAVPVFRAVATRARRCLKVAQLRSNLLRQPVKQAFWPLIMADIYLRRLQKAGDNPLDKRLEQ 272
N Y L++ D ENYL LL + V RA AIRAFN+E+A +R VS + +G +R+QF++ D+L N N P PV LA ++ F+ + H L++ R L F S+ E++ + E T SL +L LG V ++ A G A GL+ +LR TP HA R Y+P D++ + V+Q +I G Q+ VA+ A + L++A+ + + AF + D+YL++LQKA N + +L++
Sbjct: 44 NADYCRELVKKFDFENYLWCLLMPKEVQRAAFAIRAFNVEIAQVRDVVSEKKIGFMRMQFWK----DVLQNINEGSPPQMPVAVELAGAVRYFKLSRRYLSH-LLEGRADQLEIDGFTSVKEVEKYAENTVSSLHYLMLECLGVKNVHADHAASHIGKAQGLTTLLRATPYHAQQRRVYLPIDIIVKNKVSQEDVIRGRNEQNIRDAIFEVASLAHQHLEIARSFHKDVPKTAVPAFINTVPCDLYLKKLQKANFNVFEPKLQE 302
BLAST of Gvermi5468.t1 vs. uniprot
Match: A0A2R5LC51_9ACAR (Putative phytoene/squalene synthetase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LC51_9ACAR) HSP 1 Score: 120 bits (302), Expect = 9.670e-29 Identity = 87/274 (31.75%), Postives = 150/274 (54.74%), Query Frame = 0
Query: 12 TPENFA-YTLALLRNNDNENYLANLLQRRSVSRAHAAIRAFNIELANIRSNVSNEDLGRLRLQFFRSQFADILSNPNPNPASPVLDVLAESISSFRHVNFDMLHTLIDARETDLSYPNFRSLGELQSFGERTQGSLIHL--HALLLGGARVENTAKTAGAAVGLSIILRGTPAHAASRLSYMPRDLVQRYGVAQSQLISGGQDAVPVFRAVATRARRCLKVAQLRSNLLRQPVKQAFWPLIMADIYLRRLQKAGDNPLDKRLEQGLRTTYPLAL 282
TP++ A Y + +L+ D EN+L LL + + R+ +IRAFN+EL+ IR VS ++GR+R+QF+R +I N +P P PV LA ++ S R ++ L+ +ID+RE ++ +L + + ER+ S ++L A + + ++ A G GL+ ++RG P +A+ Y+P + + ++ V+Q + G D V +A+ A + L A+ + + ++ F P + +D YL+RL+ A N D RL+Q T PLAL
Sbjct: 17 TPQSNAHYCMDILKKYDYENFLCCLLLPKDIRRSAISIRAFNVELSQIRDLVSKPEIGRMRIQFWRDALENIY-NESP-PQQPVAMELALAVQSKR-LSKHWLNRMIDSREDLITDRPHTTLQNAEDYAERSISSTLYLILQASGIQDVQCDHVASHVGRLQGLTNLIRGVPFNASRGRVYLPIETMAKHKVSQEAVAQGKGDVKEVIYEIASAAHQHLDTARSLQHKVPLSLRTVFLPAVSSDKYLQRLRLADFNVFDARLQQR-NHTLPLAL 286
BLAST of Gvermi5468.t1 vs. uniprot
Match: NDUF6_MOUSE (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 n=40 Tax=Tetrapoda TaxID=32523 RepID=NDUF6_MOUSE) HSP 1 Score: 121 bits (304), Expect = 1.060e-28 Identity = 83/264 (31.44%), Postives = 141/264 (53.41%), Query Frame = 0
Query: 13 PENFAYTLALLRNNDNENYLANLLQRRSVSRAHAAIRAFNIELANIRSNVSNEDLGRLRLQFFRSQFADILSNPNPNPASPVLDVLAESISSFRHVNFDMLHTLIDARETDLSYPNFRSLGELQSFGERTQGSLIHLHALLLG--GARVENTAKTAGAAVGLSIILRGTPAHAASRLSYMPRDLVQRYGVAQSQLISGGQD--AVPVFRAVATRARRCLKVAQLRSNLLRQPVKQAFWPLIMADIYLRRLQKAGDNPLDKRLEQ 272
P + Y L LLR D E+YL +LL R+ +A+RAFN+ELA ++ +VS + +G +R+QF++ D+ + NP P PV L +++ ++ L +ID RE +L +RS+ EL+++ E TQGSL++L +LG ++ A G A G+ LR TP H++ R ++P D+ ++GV+Q + QD V +A++A LK A+ + AF + + YL+++Q+ + L+Q
Sbjct: 55 PGSHLYCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWKKAVEDMYCD-NP-PHQPVAIELWKAVKK-HNLTKRWLMRIIDEREKNLDDKAYRSMQELENYAENTQGSLLYLTLEVLGVKDLHADHAASHIGKAQGIVTCLRATPYHSSRRQVFLPMDVCVQHGVSQEDFLRRNQDKNVRDVVYDIASQAHLHLKHARSFHRSVPAEAFPAFLQTVSLEDYLKKIQRVDFDIFHPSLQQ 315
BLAST of Gvermi5468.t1 vs. uniprot
Match: UPI001EE636C2 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE636C2) HSP 1 Score: 121 bits (303), Expect = 1.270e-28 Identity = 84/265 (31.70%), Postives = 137/265 (51.70%), Query Frame = 0
Query: 12 TPENFAYTLALLRNNDNENYLANLLQRRSVSRAHAAIRAFNIELANIRSNVSNEDLGRLRLQFFRSQFADILSNPNPNPASPVLDVLAESISSFRHVNFDMLHTLIDARETDLSYPNFRSLGELQSFGERTQGSLIHLHALLLG--GARVENTAKTAGAAVGLSIILRGTPAHAASRLSYMPRDLVQRYGVAQSQLISGGQDAV--PVFRAVATRARRCLKVAQLRSNLLRQPVKQAFWPLIMADIYLRRLQKAGDNPLDKRLEQ 272
T ++ + L+R +D ENYL LL + RA A+RAFN+ELA +R VS++ G LR+QF++ I P +PV LA +I F+ + L +I+AR +LS +R+ E++++ E T S+++L LG ++ A G GL +LR TP HA+ Y+P DL+ ++ V+Q ++I G + V +A+ A + L A+ S + + F ++ + YL+ LQ N D RL+Q
Sbjct: 46 TLDHRTFCKELVRKHDYENYLCCLLLPGATQRAALALRAFNVELAQVRETVSDKQRGILRMQFWKDSIDHIYKGSPPK--TPVATELAGAIHHFK-LTRKWLTRIIEARADNLSDQGYRNTAEVEAYAENTVSSIMYLLLECLGIKNVHADHAASHIGKTQGLVTLLRSTPYHASRSRVYLPLDLIVKHKVSQEKIIRGRDEQAVKDVMYDLASSAHKHLATARSFSKDVPKEASLVFLNTVVCEWYLKSLQNCDFNVFDGRLQQ 307
BLAST of Gvermi5468.t1 vs. uniprot
Match: UPI00035A1DEB (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A1DEB) HSP 1 Score: 121 bits (303), Expect = 1.420e-28 Identity = 87/266 (32.71%), Postives = 140/266 (52.63%), Query Frame = 0
Query: 15 NFAYTLALLRNNDNENYLANLLQRRSVSRAHAAIRAFNIELANIRSNVSNEDLGRLRLQFFRSQFADILSNPNPNPASPVLDVLAESISSFRHVNFDMLHTLIDARETDLSYPNFRSLGELQSFGERTQGSLIHLHALLLG--GARVENTAKTAGAAVGLSIILRGTPAHAASRLSYMPRDLVQRYGVAQSQLISGGQDAVPV----FRAVATRARRCLKVAQLRSNLLRQPVK--QAFWPLIMADIYLRRLQKAGDNPLDKRLEQ 272
N Y + L+R +D ENYLA LL ++V RA A+RAFN+ELA +R VS++ +G +R+QF++ + I P +PV LA + F ++ + +++AR L+ +F S+ E + + E + SL +L G + ++ A G A GL ++R P HAA R +P +++ ++ V+Q +I G +DA PV F + + K LRS+L P K F + D YL+ LQ+A N D +L+Q
Sbjct: 55 NIEYCVDLVRKSDYENYLATLLLPKNVQRAAFALRAFNVELAQVRDVVSDKTIGLMRMQFWKDSMSRIFQGDPPQ--TPVAVELA-GVCGFYKLSKRWMERIVEARALQLNRDSFLSIKEAEEYAEHSNSSLTYLLLECSGIKNVQADHAASHLGKAQGLVTLVRAVPYHAARRSVLLPMEILAKHKVSQEDVIRG-KDAQPVKDVIFDIASVAHQHLEKARSLRSDL---PDKCYTVFLNAAVCDHYLKALQQADFNVFDGKLQQ 313 The following BLAST results are available for this feature:
BLAST of Gvermi5468.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5468.t1 ID=Gvermi5468.t1|Name=Gvermi5468.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=294bpback to top |