Gvermi5251.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5251.t1
Unique NameGvermi5251.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length257
Homology
BLAST of Gvermi5251.t1 vs. uniprot
Match: A0A2V3J6D0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6D0_9FLOR)

HSP 1 Score: 321 bits (823), Expect = 6.030e-108
Identity = 170/235 (72.34%), Postives = 191/235 (81.28%), Query Frame = 0
Query:   25 CAP----RACEPRRRVAIATPTASLSERFPLPDPFALPSIAFTQPTVSSDLRPELIGACLWGIGLYLGFSQRVRWGTAVQNALNATLLNFVPLQVADVLASIFHTLPFLVAAFTTDALLRYASAGSATWAVASGLSVAMYGGVYELARLSARTKKITGDDKKLYQLFTAFADRTLAPNPNGRCHLIDIRAAIRNDPKARVLSNISDETLRKFVRSKYPKAKRSPNGFYRGLSIRQ 255
            CAP    R   P RR   A+P ASLS  FPLPDPFA P++AFTQP++SSD+RPELIG CLWGIGLYLGFSQRVRWGTAVQNAL   L  FVPL VAD L+S+FHTLPFLVAAF++DA LRY +AGSATWAVASGLS+AMYGGVYEL RL+ART+K+T  D++ Y  FT FA R L  N  GRCHLIDIR AIR DP A  LS+ISDETLRKFVR+ +P+AKRSPNGFYRGLSIRQ
Sbjct:   26 CAPATQVRLSSPLRR---ASPRASLSSPFPLPDPFAFPAVAFTQPSISSDIRPELIGTCLWGIGLYLGFSQRVRWGTAVQNALTNALNAFVPLNVADALSSVFHTLPFLVAAFSSDAALRYFNAGSATWAVASGLSLAMYGGVYELGRLNARTRKLTDADERAYSTFTQFAQRKLIAN--GRCHLIDIREAIREDPNATRLSSISDETLRKFVRNAFPRAKRSPNGFYRGLSIRQ 255          
BLAST of Gvermi5251.t1 vs. uniprot
Match: R7QTR7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTR7_CHOCR)

HSP 1 Score: 228 bits (580), Expect = 1.200e-70
Identity = 120/216 (55.56%), Postives = 154/216 (71.30%), Query Frame = 0
Query:   42 TASLSERFPLPDPFALPSIAFTQPTVSSDLRPELIGACLWGIGLYLGFSQRVRWGTAVQNALNATLLNF-VPLQVADVLASIFHTLPFLVAAFTTDALLRYASAGSATWAVASGLSVAMYGGVYELARLSARTKKITGDDKKLYQLFTAFADRTLAPNPNGRCHLIDIRAAIRNDPKARVLSNISDETLRKFVRSKYPKAKRSPNGFYRGLSIRQL 256
            +ASLS  FPLPD F+ P++ F   T SSD RPEL+G+ LW  GLYLGFSQ  RWG+ V +A    L +F +P    +VL    H+LPFL   F  DA+LR+A+ GSA WA+A+GLSVA YGG+YELAR S   KK++ +D++ Y LF  FA R L     G CHLIDI+ A+R DPKAR L+ +SDE+LR+FVR+++PKAKRSPNG+YRGLS+  L
Sbjct:   75 SASLSSPFPLPDLFSFPNVVFLSSTASSDFRPELVGSLLWTAGLYLGFSQSKRWGSMVFDAQAKLLRSFQLPELAVEVLVLPTHSLPFLATGFGIDAVLRHANGGSAVWAIAAGLSVASYGGIYELARSSVTPKKLSEEDQRRYDLFDDFARRKL--RACGMCHLIDIKEAVRGDPKARSLTYLSDESLRRFVRNRFPKAKRSPNGYYRGLSLLDL 288          
BLAST of Gvermi5251.t1 vs. uniprot
Match: A0A5J4YXV1_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXV1_PORPP)

HSP 1 Score: 115 bits (288), Expect = 7.240e-27
Identity = 80/207 (38.65%), Postives = 106/207 (51.21%), Query Frame = 0
Query:   78 ACLWGIGLYLGFSQRVRWGTAVQNALNATLLNFV-----------------------PLQ----VADVLASIFHTLPFLVAAFTTDALLRYASAGSATWAVASGLSVAMYGGVYELARLSA---RTKKITGDDKKLYQLFTAFADRTLAPNPNGRCHLIDIRAAIRND-PKARVLSNISDETLRKFVRSKYPKAKRSPNGFYRGLSI 253
            A LW    Y GFS+RVRWGT +   L   L   V                       P +     A+++A+  H+LPFL+AA   D LLR  S G  TW ++S  +  ++ GVYEL R SA    +++    ++K Y  F  FADR L    +GRCH  D+ +A R   P  R  S +SDE +R+F+R   P A RSPNGFYR LSI
Sbjct:  100 ALLWAFACYFGFSERVRWGTELNRRLRVALERSVLPPGEKVAVASSSDGQSSADAQSPPEPEHGAAELVAAALHSLPFLLAAIGIDTLLRK-SVGE-TWTLSSATTAVLWSGVYELGRWSAGSFMSEEEKEAERKAYDAFCEFADRAL--KRSGRCHFSDVASAFRLQCPAYRTRSKLSDEQIRRFIRRAAPDAVRSPNGFYRNLSI 302          
BLAST of Gvermi5251.t1 vs. uniprot
Match: A0A7S0G172_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G172_9RHOD)

HSP 1 Score: 99.0 bits (245), Expect = 7.070e-22
Identity = 59/183 (32.24%), Postives = 109/183 (59.56%), Query Frame = 0
Query:   74 ELIGACLWGIGLYLGFSQRVRWGTAVQNALNATLLNF-VPLQVADVLASIFHTLPFLVAAFTTDALLRYASAGSATWAVASGLSVAMYGGVYELARLSARTKKITGDDKKLYQLFTAFADRTLAPNPNGRCHLIDIRAAIRND-PKARVLSNISDETLRKFVRSKYPKAKRSPNGFYRGLSIR 254
            +++G C W + LY GFS ++R GTA++  +  +L    V   +AD +A+ FHT PF+  A   D++LR  S G   +A + G+ ++++  ++EL R   R+++   +++  +Q F  FA+++L  +  GRCH +++    R   PK R    ++D+ L++FV S  P A+R+  G+Y+ LS++
Sbjct:    1 DILGLCTWFVVLYFGFSDKIRLGTALRKIMAESLERANVGKDLADGIATAFHTFPFIFGALFIDSVLR-GSLGPG-FASSGGIFLSLWAMIFELERPRERSEEELEEERLAFQAFCEFAEKSL--DRRGRCHYVEVATEFRRQYPKYRDPRVLNDQVLKRFVASWAPAARRTRAGYYKDLSVK 179          
BLAST of Gvermi5251.t1 vs. uniprot
Match: A0A150GQ49_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GQ49_GONPE)

HSP 1 Score: 67.8 bits (164), Expect = 1.220e-9
Identity = 38/110 (34.55%), Postives = 62/110 (56.36%), Query Frame = 0
Query:  145 GSATWAVASGLSVAMYGGVYELARLSARTKKITGDDKKLYQLFTAFADRTLAPNPNGRCHLIDIRAAIRND-PKARVLSNISDETLRKFVRSKYPKAKRSPNGFYRGLSI 253
            G++ WA+++G    +  GVYE+ R +   ++        ++ F AFAD  L    +GRCH  ++ A  R + P+ R    +SD  LR  +R+ +P A R+PNG+YR LS+
Sbjct:  124 GNSIWALSTGTGACLAAGVYEVGRPTRLDRQEAAQLDAQWRDFVAFADARL--QRSGRCHESEVVAVFRREVPRYRSPEALSDAVLRDLIRNWHPDASRTPNGYYRNLSL 231          
BLAST of Gvermi5251.t1 vs. uniprot
Match: A0A8J4D162_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D162_9CHLO)

HSP 1 Score: 67.0 bits (162), Expect = 3.620e-9
Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = 0
Query:  142 ASAGSATWAVASGLSVAMYGGVYELARLSARTKKITGDDKKLYQLFTAFADRTLAPNPNGRCHLIDIRAAIRND-PKARVLSNISDETLRKFVRSKYPKAKRSPNGFYRGLSI 253
            A  G + WA+++G    +  GVYE+ R      + T    + ++ F  FA+  L  +  GRCH  ++ AA R + P+ R    +SD  LR  +R+ +P A R+PNG+YR LS+
Sbjct:  205 AGLGDSIWALSTGTGACLAAGVYEVGRPKRLNLEETRQLDQQWRDFVGFAESRLVRS--GRCHESEVAAAFRREFPRYRSREALSDGVLRDLIRNWHPDADRTPNGYYRNLSL 315          
BLAST of Gvermi5251.t1 vs. uniprot
Match: A0A8J4F7U0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F7U0_9CHLO)

HSP 1 Score: 64.3 bits (155), Expect = 3.020e-8
Identity = 37/113 (32.74%), Postives = 61/113 (53.98%), Query Frame = 0
Query:  142 ASAGSATWAVASGLSVAMYGGVYELARLSARTKKITGDDKKLYQLFTAFADRTLAPNPNGRCHLIDIRAAIRND-PKARVLSNISDETLRKFVRSKYPKAKRSPNGFYRGLSI 253
            A  G + WA+++G    +  GVYE+ R      +      + ++ F  FA+  L  +  GRCH  ++ AA+R + P+ R    +SD  LR  +R+ +P   R+PNG+YR LS+
Sbjct:  205 AGLGDSIWALSTGTGACLAAGVYEVGRPKRLNLEEARQLDQQWRDFVGFAESRLVRS--GRCHESEVAAALRRELPRYRSQEALSDGVLRDLIRNWHPDVDRTPNGYYRNLSL 315          
BLAST of Gvermi5251.t1 vs. uniprot
Match: D8UCV5_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UCV5_VOLCA)

HSP 1 Score: 62.0 bits (149), Expect = 2.800e-7
Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = 0
Query:  142 ASAGSATWAVASGLSVAMYGGVYELARLSARTKKITGDDKKLYQLFTAFADRTLAPNPNGRCHLIDIRAAIRND-PKARVLSNISDETLRKFVRSKYPKAKRSPNGFYRGLSI 253
            A  G + WA+++G    +  GVYE+ R    + +      + ++ F  FA+  L  +  GRCH  D+ AA R + P+ R    + D  LR  +R+ +  A R+PNG+YR LS+
Sbjct: 1230 AGLGDSIWALSTGTGACLAAGVYEVGRPRRLSLEEARQLDQQWRDFVTFAESRLVRS--GRCHESDVAAAFRRELPRYRSREALPDAVLRDLIRTWHSDADRTPNGYYRNLSL 1340          
The following BLAST results are available for this feature:
BLAST of Gvermi5251.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3J6D0_9FLOR6.030e-10872.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QTR7_CHOCR1.200e-7055.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YXV1_PORPP7.240e-2738.65Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0G172_9RHOD7.070e-2232.24Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A150GQ49_GONPE1.220e-934.55Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A8J4D162_9CHLO3.620e-934.51Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
A0A8J4F7U0_9CHLO3.020e-832.74Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
D8UCV5_VOLCA2.800e-732.74Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..256
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:788541..789311 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5251.t1Gvermi5251.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 788541..789311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5251.t1 ID=Gvermi5251.t1|Name=Gvermi5251.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=257bp
MSSLRALAFRVALPLPARPSPVASCAPRACEPRRRVAIATPTASLSERFP
LPDPFALPSIAFTQPTVSSDLRPELIGACLWGIGLYLGFSQRVRWGTAVQ
NALNATLLNFVPLQVADVLASIFHTLPFLVAAFTTDALLRYASAGSATWA
VASGLSVAMYGGVYELARLSARTKKITGDDKKLYQLFTAFADRTLAPNPN
GRCHLIDIRAAIRNDPKARVLSNISDETLRKFVRSKYPKAKRSPNGFYRG
LSIRQL*
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