Gvermi5228.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5228.t1 vs. uniprot
Match: A0A2V3IEV2_9FLOR (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV2_9FLOR) HSP 1 Score: 629 bits (1622), Expect = 2.300e-216 Identity = 357/608 (58.72%), Postives = 419/608 (68.91%), Query Frame = 0
Query: 37 IPTAPGTGQGFFPCHPNKGRKQTEVTCAHVRMPPALCSRCALKPVTAQGQFKRCDDIFELETPQCEQALDEYVALNSACDPLRTQAVADWKAGDAAAGTQLDYFLYSVCELCCDCVPMGIAADDYEPLKAAHTVQNPALWAADRGNCPAHAQYDLCNIFPSVQSIIKPGEPETAQPPACPALSMWLNSDRSTNWQINPDATISSSIRTFLDGTLDALECDDEGIWRTCYHMEDLQNHIDIPGNPQPIP----ILET-PAQSGAAD---ITPATSPAVVSE-------LPPAAEPXXXXXXXXXXXXXXXXXXXXXXA----------QPVAETGDIDKDSTIPAALTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNTSTTTQAI-EEAPVTVGGQENGIYGSPSASGSPSSNGDSCFPSSATVELFSGLRIPIYQLRIGDRVRVSADQFSDVYMFSHRDATASDSSYVRIVTTETSVTMTTGHYLPVIKNTTRSGPVYVQAASVEAGDRVQLASGHWSVVNDVLPDEASGLFNPHTFSGTICVDGVVASTFTRSVSADAAQALLSPVRALYWLGIARERLVGSWFIHGVDQRWTSIAQALLL 618
IPTA G GQGFFPCHP K RKQTEVTC+ VR+PPA CSRCALKPVT+ GQF RCDDIF+LETP C+ AL+EYV LN CDP+R QA+ WKAGDA+A TQLDYF+YSVCELCCDCVPMGI A DY LKAAH+ QNP LWAADRGNCPAHAQYDLCN+ PSVQ+ +KPGEP+ PPACP L+ WLNS RSTNWQ NPDA+I S+R FL+ L ALEC+ E +WRTC+HMEDLQNHIDIPG+ Q P I ET G D +TP P +E ++EP XXXXXXXXXXXXXXXXXXXX QP STI A + + T T AI + P+TVGGQENG YGSPS + PS++GDSCFP+SATVEL SG IP+++LRIGDRVRVS+ +FSDVYMFSHRD TA++ YVRI T +TSV MT+GHYLP+ N T+ V VQA SV+ GD + ASG S V +VL +A GL+NPHT +GTICVDGVV STFTRS+S+ AA A+LSP+RA+Y +G+ RE + G WF +GVD TS+ Q LLL
Sbjct: 150 IPTAAGNGQGFFPCHPTKSRKQTEVTCSTVRIPPAFCSRCALKPVTSNGQFARCDDIFQLETPSCQLALEEYVDLNRNCDPVREQALNAWKAGDASAATQLDYFMYSVCELCCDCVPMGITAADYPALKAAHSEQNPTLWAADRGNCPAHAQYDLCNVLPSVQAFVKPGEPDKVMPPACPPLNAWLNSARSTNWQTNPDASIDGSVRIFLNDALQALECEREDVWRTCFHMEDLQNHIDIPGSIQSAPAADDIEETNDVNDGVVDSSGVTPGNVPVSPAEPVDTSTDSATSSEPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPXXXXXXXXXXSTIAQAES------------------------AGGATPVVEETTPVTGGAITSDTPITVGGQENGAYGSPSPT--PSADGDSCFPASATVELASGAHIPMHKLRIGDRVRVSSSEFSDVYMFSHRDITATEEYYVRISTLDTSVIMTSGHYLPIANNNTKDS-VLVQAHSVQIGDHIHTASGKLSRVTEVLLAKAYGLYNPHTVAGTICVDGVVTSTFTRSLSSKAAHAMLSPIRAMYSVGVVRESIAGKWFTNGVDSHLTSLVQRLLL 730
BLAST of Gvermi5228.t1 vs. uniprot
Match: A0A2V3IVT7_9FLOR (Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVT7_9FLOR) HSP 1 Score: 288 bits (738), Expect = 1.550e-86 Identity = 212/549 (38.62%), Postives = 285/549 (51.91%), Query Frame = 0
Query: 45 QGFFPCHPNKGRKQTEVTCAHVRMPPALCSRCALKPVTAQGQFKRCDDIFELETPQCEQALDEYVALNSACDPLRTQAVADW-KAGDAAAGTQLDYFLYSVCELCCDCVPMGIAADDYEPLKAAHTVQNPALWAADRGNCPAHAQYDLCNIFPSVQSIIKPGEPETAQPPACPALSMWLNSDRSTNWQINPDATISSSIRTFLDGTLDALECDDEGIWRTCYHMEDLQNHIDIPGNPQPIPILETPAQSGAADITPATSPAVVSELP-PAAEPXXXXXXXXXXXXXXXXXXXXXXAQPVAETGDIDKDSTIPAALTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNTSTTTQAIEEAPVTVGGQENGIYGSPSASGSPSSNGDSCFPSSATVELFSGLRIPIYQLRIGDRVRVSADQFSDVYMFSHRDATASDSSYVRIVTTETSVTMTTGHYLPVIKNTTRSGPVYVQAASVEAGDRVQLASGHWSVVNDVLPDEASGLFNPHTFSGTICVDGVVASTFTRSVSADAAQALLSPVRALYWLGI 591
+ FFPCH K +V C V++PP LC C L+P G F CD I++ +P C A+ YV N CD R +A+ K GD A +++DYFLYSVCE CCDCVPMG+ D+ L AH+ +P LW+A RGNCPAHA+YD+C + PS+ + ++ P CP+L+ W+N+ + +WQ NP+ T+++ I FL+G L A C D IW +C ME Q+H+D+P + A S D+ P +PA E+ P AEP + P T + DS+ + XXXXXXXXXXXXXX XXXXXXXXXXXX DN+ T + P SG S CFP+SA V G RI + Q+ +GD + V + FS VY FSHR + A S +V + SV +T GH + RS A V GD + A G +V D GL+N HTF G + V+GV+ STFT +V AQ LL+P RAL+ +G+
Sbjct: 22 KSFFPCHSTKASVHNDVKCTSVKLPPRLCGLCPLRPTLQDGSFDVCDRIYDTTSPACMSAMRTYVNDNE-CDARRREALDRLEKNGDEDARSEIDYFLYSVCEQCCDCVPMGVKQGDFAQLSKAHSASSPTLWSATRGNCPAHARYDVCKVLPSIATFTAD---KSKTKPICPSLNKWINTPAAEDWQTNPEVTLAADIEQFLNGMLVATHCGDAQIWNSCQQMEFKQHHLDLPAG-----FDDADATSEEGDVVPRPTPAPGGEIDLPVAEPSSTYS-----------------SSPQDTTQALTGDSS-----SXXXXXXXXXXXXXXXEXXXXXXXXXXXXNGGVEDNSGT-------------------FNLPLLSGIRS-----CFPASARVLRRDGRRIRMDQVSVGDEIEVGENNFSAVYAFSHRVSRAY-SQFVELRWKNGSVALTGGHRI-------RSNGELKVARDVREGDVIYGADGSELIVEDTRMVWDWGLYNAHTFEGEVVVNGVLCSTFTEAVEVGVAQGLLTPFRALFRMGV 507
BLAST of Gvermi5228.t1 vs. uniprot
Match: R7QFW8_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFW8_CHOCR) HSP 1 Score: 257 bits (657), Expect = 1.870e-75 Identity = 205/478 (42.89%), Postives = 266/478 (55.65%), Query Frame = 0
Query: 137 LDYFLYSVCELCCDCVPMGIAADDYEPLKAAHTVQNPALWAADRGNCPAHAQYDLCNIFPSVQSIIKPGEPETAQPPACPALSMWLNSDRSTNWQINPDATISSSIRTFLDGTLDALECDDEGIWRTCYHMEDLQNHIDIPGNPQPIPILETPAQSGAADITPATSPAVVSELPPAAEPXXXXXXXXXXXXXXXXXXXXXXAQPVAETGDIDKDSTIPAALTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------DNTSTTTQAIEEAPVTVGGQENGIYGSPSASGSPSSNGDSCFPSSATVELFSGLRIPIYQLRIGDRVRVSADQFSDVYMFSHRDATASDSSYVRIVTT--ETSVTMTTGHYLPVIKNTTRSGPVYVQAASVEAGDRVQLASGHWSVVNDVLPDEASGLFNPHTFSGTICVDGVVASTFTRSVSADAAQALLSPVRALYWLGIARERLVGSWFIHG 604
LDYFLYSVCE CCDC+PMG DY+ L +AH+ +P LW DRGNCPAHAQ+D+C + P+V+ KPG+PE P CP L W S + +W +NP+ I S +R FL+G L A +CD++ IW CY MED Q+++D+P P E+P P XXXXXXXXXXXXXXXXXXX + D +ST XXXXXXXXXXXXXXXXXXXXXXXXXX ++TS + S SCFP+++TVEL SG RIP+ LRIG VRVS FS V++FSHR + +S SY++I T ++T+T+GHYL + + + AA+ + GD + A W+ V V +A+GL+NPHT G + VDG V ST+T +V A LL+P+RA Y G+ ERL GS+ G
Sbjct: 3 LDYFLYSVCEQCCDCIPMGTRRRDYDALASAHSPADPTLWKEDRGNCPAHAQFDVCKVLPNVRYFAKPGDPELVAPKICPKLREWQKSPEAADWPVNPETNIESDVRRFLNGILVATDCDNKLIWGRCYEMEDKQSNLDLPEGADP------------------------PEVPVITRPPXXXXXXXXXXXXXXXXXXXEPEETGTTPASTDSESTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGEDDLSEESGSDNDTSXXXXXXXXXXXXXXXXXXXXXXXEQGTSSIIEGTASCFPATSTVELASGARIPMSDLRIGHSVRVSTHAFSPVFLFSHRTS-SSAPSYIQITPTTGNHTLTVTSGHYLHINRQ-------LLPAAAAKVGDHILTADHGWAPVAAVRIVQANGLYNPHTLQGDLVVDGFVTSTYTTAVPRRIATGLLAPLRAFYRHGLVSERLFGSFLADG 448
BLAST of Gvermi5228.t1 vs. uniprot
Match: A0A2V3IMM0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMM0_9FLOR) HSP 1 Score: 168 bits (426), Expect = 5.970e-45 Identity = 83/217 (38.25%), Postives = 115/217 (53.00%), Query Frame = 0
Query: 60 EVTCAHVRMPPALCSRCALKPVTAQGQFKRCDDIFELETPQCEQALDEYVALNSACDPLRTQAVADW-KAGDAAAGTQLDYFLYSVCELCCDCVPMGIAADDYEPLKAAHTVQNPALWAADRGNCPAHAQYDLCNIFPSVQSIIKPGEP-ETAQPPACPALSMWLNSDRSTNWQINPDATISSSIRTFLDGTLDALECDDEGIWRTCYHMEDLQNHI 274
VTC V +PP LCS C LKP+ G F+ C IF+LE+ C L EYV LN CDP+R + V +G A G LDYF+YS+CE CCDC+P G Y ++ + N A RGNCPAHA YD+C ++P ++ ++ GE + + P CP L WL + + NW ++ FL+ +DA C W +C +E Q +
Sbjct: 6 NVTCGVVALPPRLCSACKLKPILPGGHFEDCTSIFDLESQSCRAELKEYVRLNKHCDPVRAEQVPKMMSSGGARQG--LDYFIYSICEQCCDCIPRGTHISQYGFRESIGKLFN-----AGRGNCPAHAVYDVCKVWPKIRGVVSAGESRKVSAPMVCPHLKTWLRNPDNANWLHRNQVKYHPAVGNFLNSFIDAAGCSARPFWESCVRLETKQKRL 215
BLAST of Gvermi5228.t1 vs. uniprot
Match: A0A2V3IQT2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQT2_9FLOR) HSP 1 Score: 161 bits (408), Expect = 5.380e-42 Identity = 87/232 (37.50%), Postives = 120/232 (51.72%), Query Frame = 0
Query: 46 GFFPCHPNKGRKQTEVTCAHVRMPPALCSRCALKPVTAQGQFKRCDDIFELETPQCEQALDEYVALNSACDPLRTQAVADWKAGDAAAGTQLDYFLYSVCELCCDCVPMGIAADDYEPLKAAHTVQNPALWAADRGNCPAHAQYDLCNIFPSVQSIIKPG-EPETAQ--PPACPALSMWLNSDRSTNWQINPDATISSSIRTFLDGTLDALECDDEGIWRTCYHMEDLQNHI 274
G PCH +K + VTC VR+P +C++C LKP GQF C I++L+ P C L Y N CDP R V D G + LDYF+YSVCE CCDC+P G +A+ Y+ T+ N A RGNCPAHA YD+C +FP+++ +K G E +T + P C + W+ S NW + + I FL+ D + C + IW C +E Q +
Sbjct: 22 GVNPCHGDKDKYGVGVTCTGVRIPGEMCNQCKLKPHLPDGQFADCASIYDLDDPACRDQLRIYAQENKHCDPQRVAQVQDM--GKYSNRLALDYFVYSVCEECCDCIPRGASANQYQQRLEQGTLGN-----AYRGNCPAHAHYDICRVFPNIKYTMKAGVEDDTHEDWPKICWHIGKWIFSRDGRNWLYKSNVNMDWRIARFLENFWDDVGCWRQTIWTECTGLEGDQGRL 246
BLAST of Gvermi5228.t1 vs. uniprot
Match: A0A2V3ID26_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID26_9FLOR) HSP 1 Score: 160 bits (405), Expect = 8.540e-42 Identity = 86/228 (37.72%), Postives = 120/228 (52.63%), Query Frame = 0
Query: 48 FPCHPNKGRKQTEVTCAHVRMPPALCSRCALKPVTAQGQFKRCDDIFELETPQCEQALDEYVALNSACDPLRTQAVADWKAGDAAAGTQLDYFLYSVCELCCDCVPMGIAADDYEPLKAAHTVQNPALWAADRGNCPAHAQYDLCNIFPSVQSIIKPGEP-ETAQPPACPALSMWLNSDRSTNWQINPDATISSSIRTFLDGTLDALECDDEGIWRTCYHMEDLQNHI 274
PCH +K + C VR+P LCS+C L+ V G FK C I+ L+ P C+ L YV +N CD R V W + + QLDYF+YSVCE CCDC+ G ++ K + + +P +RGNCPAHA YD+C + P+++ + G P + C L MWL S+ S N+ N +A +S +I+ FL A +C E +W C ME Q HI
Sbjct: 12 LPCHMDK--QSLNSMCRQVRLPRELCSKCTLRLVKENGGFKDCKSIYNLDAPGCKAKLQRYVDINP-CDGKRASQVKAW---NPTSKMQLDYFVYSVCEQCCDCIYKGATPGQFQRRKNENRLFHP-----ERGNCPAHAVYDICKVLPNIRYMALGGAPFKEGWENTCKDLRMWLRSEASKNFSTNHNAKMSGNIKKFLRSVNVANQCGSETVWTRCVRMERKQMHI 228
BLAST of Gvermi5228.t1 vs. uniprot
Match: R7QF16_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF16_CHOCR) HSP 1 Score: 160 bits (404), Expect = 1.980e-41 Identity = 80/230 (34.78%), Postives = 114/230 (49.57%), Query Frame = 0
Query: 46 GFFPCHPNKGRKQTEVTCAHVRMPPALCSRCALKPVTAQGQFKRCDDIFELETPQCEQALDEYVALNSACDPLRTQAVADWKAGDAAAGTQLDYFLYSVCELCCDCVPMGIAADDYEPLKAAHTVQNPALWAADRGNCPAHAQYDLCNIFPSVQSIIKPGEP-ETAQPPACPALSMWLNSDRSTNWQINPDATISSSIRTFLDGTLDALECDDEGIWRTCYHMEDLQNHI 274
G PCHPN+ + V C + +PP +C C L ++G F C I+++ P C ++ Y LN CD +R + + D+ D LDYF+YSVCE CCDC+P G + YE K A L + RGNCPAHA YD+C ++P ++ + +PG +P ACP + W S S W + IS +R FL C + W+ C +E Q I
Sbjct: 23 GKNPCHPNRRVESLGVPCEGIYLPPGMCDNCELSAYDSRGNFNDCQAIYKIGEPACRSQIERYSELNP-CDTVRKKQLEDFDDPDNRKA--LDYFVYSVCEECCDCIPRGARSSQYEERKRARP---RTLTSLVRGNCPAHAHYDICRVWPEIRHVTRPGGTLRLGRPKACPKIREWFFSPASKGWAGQDNTDISRDVRNFLGNFNSVARCRRKSTWQRCTDLEVAQRRI 246
BLAST of Gvermi5228.t1 vs. uniprot
Match: A0A2V3IJW6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJW6_9FLOR) HSP 1 Score: 153 bits (387), Expect = 4.830e-39 Identity = 86/231 (37.23%), Postives = 114/231 (49.35%), Query Frame = 0
Query: 46 GFFPCHPNKGRKQTEVTCAHVRMPPALCSRCALKPVTAQ-GQFKRCDDIFELETPQCEQALDEYVALNSACDPLRTQAVADWKAGDAAAGTQLDYFLYSVCELCCDCVPMGIAADDYEPLKAAHTVQNPALWAADRGNCPAHAQYDLCNIFPSVQ-SIIKPGEPETAQPPACPALSMWLNSDRSTNWQINPDATISSSIRTFLDGTLDALECDDEGIWRTCYHMEDLQNHI 274
G PCH NK ++ VTC V P LC C LKP GQF C I+ L PQC+Q L Y + CDP+R + AD+ + + LDYF+YSVCE CCDCVP+G +Y + L A+ RGNCPAHA +D+C + P ++ S G+ P CP L+ WL S S NW + I FL C +E W+ C ++E Q +
Sbjct: 22 GINPCHDNKAKQGAGVTCQKVVFPEGLCRACKLKPFNPNNGQFYDCTSIYNLTDPQCQQELRLYARWQAHCDPVRLRQTADFS--NPSNVRALDYFVYSVCEECCDCVPIGSKTAEYGWRAPTNN-----LLASKRGNCPAHAYFDICKVLPKIRFSKNINGQDHWDWPMICPLLTKWLFSKNSQNWLKKSYVYMDWRINRFLVWFFWDNRCGNEVTWKNCVNLESAQKRV 245
BLAST of Gvermi5228.t1 vs. uniprot
Match: R7QE68_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE68_CHOCR) HSP 1 Score: 117 bits (292), Expect = 1.190e-26 Identity = 66/188 (35.11%), Postives = 90/188 (47.87%), Query Frame = 0
Query: 92 DIFELETPQCEQALDEYVALNSACDPLRTQAVADWKAGDAAAGTQLDYFLYSVCELCCDCVPMGIAADDYEPLKAAHTVQNPALWAADRGNCPAHAQYDLCNIFPSVQSIIKPGEP-----ETAQPPACPALSMWLNSDRSTNWQINPDATISSSIRTFLDGTLDALECDDEGIWRTCYHMEDLQNHI 274
DI++ PQC QAL Y +LN CD R + V D+ LDYF+YSVCE CCDC+P G ++ KAA T L DR NCPAHA+YD+C ++P+++ + P E T P CP + W +S N +S+ FL + C + W C +E Q I
Sbjct: 2 DIYDTSNPQCRQALRRYASLNP-CDVQRNRHVRDFSNSQNLIA--LDYFIYSVCEQCCDCIPRGTKPGEFAKRKAAGT-----LIKVDRANCPAHARYDVCKVWPNIRHLRSPWERLPRDLNTLWPKICPIIFKWADSPDGQNLYNKDQINQPASMTQFLTRYVKVAFCSKKAFWNECTALEKSQLRI 181
BLAST of Gvermi5228.t1 vs. uniprot
Match: R7QIA6_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIA6_CHOCR) HSP 1 Score: 112 bits (280), Expect = 9.220e-23 Identity = 68/157 (43.31%), Postives = 100/157 (63.69%), Query Frame = 0
Query: 432 CFPSSATVELFSGLRIPIYQLRIGDRVRVSADQFSDVYMFSHRDATASDSSYVRIVTTE-TSVTMTTGHYLPVIKNTTRSGPVYVQAASVEAGDRVQLASGHWSVVNDVLPDEASGLFNPHTFSGTICVDGVVASTFTRSVSADAAQALLSPVRALY 587
CFP+ A+VEL +G + Q+ +GDRV+V+ FSDV+MF+H+DA+A +VRI T S++ T GHY+ I N + A S + GD ++L G ++V++V + +GLFNP T G I V+ V ASTFTR++ AAQA+L+P+R LY
Sbjct: 285 CFPADASVELENGSFKTMAQVELGDRVKVADGSFSDVFMFTHKDASAVHD-FVRISTRSGASLSATRGHYI-YINN------AFAAAGSAKVGDTLELGDGSKTLVSNVGIVKGTGLFNPQTVHGDIIVNSVRASTFTRTIEPSAAQAMLAPLRMLY 433 The following BLAST results are available for this feature:
BLAST of Gvermi5228.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5228.t1 ID=Gvermi5228.t1|Name=Gvermi5228.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=619bpback to top |