Gvermi5101.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5101.t1
Unique NameGvermi5101.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length303
Homology
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BLAST of Gvermi5101.t1 vs. uniprot
Match: A0A2V3J6L1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6L1_9FLOR)

HSP 1 Score: 327 bits (839), Expect = 6.710e-108
Identity = 166/248 (66.94%), Postives = 199/248 (80.24%), Query Frame = 0 
Query:   37 LFRGNKRGNTISLSVIVPTYVTALLLTACMLAVLSLFIHRLLTAPALR-GANDELILAFFALGALAYSGLLGCDRRRRRVAVQLTCVPCFGNGEHSSSHQLLAVEKTPMLCFAPQFIAPQEAPVIEQISEQTSASNSPSSTERRSKSAGITKRTFLEISCRTAHTWVFGRPKRQAWPLNVVRTHRTVGKRFVLIKDQTVQDGAGSVLLSPSFLQSTELDKLMIARAVHEAMYRSAPCILHSLHDKFEA 283
            +FRGNKRGN++S  VIVPTYV+A L    +L++L+LF+HRL+T P+L   ++ +++L+F ++ AL+YSGLLG DRRRR VAV L  +PCFGNG+HSSSHQLLAVEK+PMLCFAPQFIAP              +  S     R + + GITK TFLEISCRTAHTW+FGRPKRQAWPLNV+RT+RT+GKRFVLIKDQTVQDGAGSVLL+P+FLQS ELDKL IAR VHEAMYRSAPCILHS+ DKF A
Sbjct:    1 MFRGNKRGNSLSFFVIVPTYVSATLTLCSVLSILALFVHRLVTDPSLALVSSSDIVLSFLSILALSYSGLLGHDRRRRNVAVLLAKLPCFGNGDHSSSHQLLAVEKSPMLCFAPQFIAPHTVSFDRNTEPSNGSQPSSLDNPRVTSTVGITKNTFLEISCRTAHTWLFGRPKRQAWPLNVLRTYRTIGKRFVLIKDQTVQDGAGSVLLTPTFLQSHELDKLRIARVVHEAMYRSAPCILHSVTDKFHA 248
The following BLAST results are available for this feature:
BLAST of Gvermi5101.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6L1_9FLOR6.710e-10866.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..70
NoneNo IPR availableTMHMMTMhelixcoord: 90..107
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 15..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24228contigScGOVlb_24228:232230..233320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5101.t1Gvermi5101.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24228 232230..233320 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5101.t1 ID=Gvermi5101.t1|Name=Gvermi5101.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=303bp
MAPVVNELQSRPLQHANGWLSLLLLTTMVLHLFYARLFRGNKRGNTISLS
VIVPTYVTALLLTACMLAVLSLFIHRLLTAPALRGANDELILAFFALGAL
AYSGLLGCDRRRRRVAVQLTCVPCFGNGEHSSSHQLLAVEKTPMLCFAPQ
FIAPQEAPVIEQISEQTSASNSPSSTERRSKSAGITKRTFLEISCRTAHT
WVFGRPKRQAWPLNVVRTHRTVGKRFVLIKDQTVQDGAGSVLLSPSFLQS
TELDKLMIARAVHEAMYRSAPCILHSLHDKFEANIKFKSVLRGHTPVQSD
AT*
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