Gvermi8075.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8075.t1
Unique NameGvermi8075.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length298
Homology
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BLAST of Gvermi8075.t1 vs. uniprot
Match: A0A2V3IVZ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVZ7_9FLOR)

HSP 1 Score: 381 bits (978), Expect = 2.170e-130
Identity = 196/297 (65.99%), Postives = 222/297 (74.75%), Query Frame = 0 
Query:    1 MAFILSAPLPFRRNFTAAPTTTTTAPRTAPFATXXXXXXXXXXXXFDSSAAEKPHKKAPAHVVDSRVATRVEAHHWVAVKSSSLRIFERAAVAQADLAHQVDARTHSGALHRWLLREAEDPTHLFVNPTSSQSDVRYVVMEAFDRQYDSGENQLVMRRWLSAVERAAPLMDAVHIHTLHYENAFTSKVHDVQFDPYHNIVVMESINVDLTMDDAINHVFDALRRSAEKSVSAGECLEFCVLHAPNEHGFFKTIEVFKNVAALQSHMSGTDVSTVQEITPYLIQGNRNRQTFKPVVFT 297
            MAFI + PL  R++    P T T+  R +PFAT               S   KPHKKA AHV+D  +ATRVEAHHW+AV S   R+FE AAVAQAD A QVDARTHSGALHRW+LRE EDP H+F+NP     + RYVVMEAF R   S ENQLVMRRWLSAVER  PL+DAV I TLHYEN FTSKVH+VQFDP+HNIVVMESINVD   + A+  V +AL RSAEKSVSAGECLEFCVLHAPNEH FFKTIE++K+V AL SHM+ TDV T +EI PYLIQGNR RQTFKP++FT
Sbjct:    1 MAFITTTPLLHRQS---TPNTLTSCSRKSPFATAATPSPASTPNVQRQSTT-KPHKKAAAHVIDFAIATRVEAHHWIAVNSPGARLFEHAAVAQADAARQVDARTHSGALHRWVLRETEDPAHIFLNPELPNHEARYVVMEAFSRDEPSFENQLVMRRWLSAVERVGPLVDAVDIQTLHYENVFTSKVHNVQFDPHHNIVVMESINVDTAKEKAMERVVEALERSAEKSVSAGECLEFCVLHAPNEHAFFKTIEIYKDVEALMSHMNATDVVTSEEIKPYLIQGNRKRQTFKPIIFT 293
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BLAST of Gvermi8075.t1 vs. uniprot
Match: R7Q8E7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8E7_CHOCR)

HSP 1 Score: 256 bits (653), Expect = 5.480e-81
Identity = 133/248 (53.63%), Postives = 167/248 (67.34%), Query Frame = 0 
Query:   49 SAAEKPHKKAPAHVVDSRVATRVEAHHWVAVKSSSLRIFERAAVAQADLAHQVDARTHSGALHRWLLREAEDPTHLFVNPTSSQSDVRYVVMEAFDRQYDSGENQLVMRRWLSAVERAAPLMDAVHIHTLHYENAFTSKVHDVQFDPYHNIVVMESINVDLTMDDAINHVFDALRRSAEKSVSAGECLEFCVLHAPNEHGFFKTIEVFKNVAALQSHMSGTDVSTVQEITPYLIQGNRNRQTFKPVVF 296
            S   +P  +AP  V+DSRVA+ +E+HHW+ V +   R+FERAAVAQAD+  QV+ R   GALHRW+LRE +DP  L      S  D RYVVME F +   S E+  +MRRWLSAVER  P + AV I T +YEN FTSK+HDV+FDP  NIVV+ES+NVD+        V D LR +AE SVSAG CLEFCVLH P +HGFFKTI+V+KNV AL+ HM   D    + +   +   +R+R TF+PVVF
Sbjct:   56 SPTPRPRTRAP--VIDSRVASVLESHHWIVVNNQGRRMFERAAVAQADMTRQVERRAQRGALHRWVLREVQDPIGLGPAAPFSPKDSRYVVMETF-KATASAEDPGIMRRWLSAVERVGPSIHAVDIRTRNYENLFTSKLHDVKFDPNENIVVVESVNVDMARPHNAEEVVDILRSTAEASVSAGTCLEFCVLHKPGKHGFFKTIQVYKNVDALRQHMDSVDQVYTRRVQGRISDSHRSRHTFRPVVF 300
The following BLAST results are available for this feature:
BLAST of Gvermi8075.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IVZ7_9FLOR2.170e-13065.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8E7_CHOCR5.480e-8153.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 210..297
e-value: 8.9E-6
score: 27.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..35
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 212..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:936203..937096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8075.t1Gvermi8075.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 936203..937096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8075.t1 ID=Gvermi8075.t1|Name=Gvermi8075.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=298bp
MAFILSAPLPFRRNFTAAPTTTTTAPRTAPFATATAPQPQPSPLPFDSSA
AEKPHKKAPAHVVDSRVATRVEAHHWVAVKSSSLRIFERAAVAQADLAHQ
VDARTHSGALHRWLLREAEDPTHLFVNPTSSQSDVRYVVMEAFDRQYDSG
ENQLVMRRWLSAVERAAPLMDAVHIHTLHYENAFTSKVHDVQFDPYHNIV
VMESINVDLTMDDAINHVFDALRRSAEKSVSAGECLEFCVLHAPNEHGFF
KTIEVFKNVAALQSHMSGTDVSTVQEITPYLIQGNRNRQTFKPVVFT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011008Dimeric_a/b-barrel