Gvermi4293.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4293.t1
Unique NameGvermi4293.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length455
Homology
BLAST of Gvermi4293.t1 vs. uniprot
Match: A0A2V3J127_9FLOR (Peroxisomal membrane protein PEX14 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J127_9FLOR)

HSP 1 Score: 499 bits (1284), Expect = 7.180e-172
Identity = 279/459 (60.78%), Postives = 338/459 (73.64%), Query Frame = 0
Query:    1 MSDPFEDSATPLPAASGVRESSVQQAVTFLKDPRVRRSDPSRALAFLRQKGISDEELREAYRREGLPFPQAIAQPLPHPHLPQHPFPV-----APPPFPGPLQVRPVATRPSWVSVFLGLTAAAGVYTALRELLRRYVVPLYFPDAARIAEERRLREENTFLAQQRQIAELRERIQDLLASSEKTSDQVEHLSKSISSSIALRERELSQASELRDAIRQLSHSVTASGNTETSRIIRPSPERDVDSNLSQRILNHAQKSGSLAYTHGKQTDTSRLRKSVDIQTVDVNTDGDSIPQGSNSARVTPVSESHVDHFVSAEEGNHNSEGNPFDGADDFMAMKPAEVDENWKAKVFKSREYESEGPVQEVCVSDTQKPHDSIENGVIARNSESGRVQFSEEDEMGVLTGVDENKGLRVAIARQLFQSDMMREAKNVVSSSQTSSEHRVRPVSMPPLEIPLSDAE 454
            M+DPFE+ ++     S  RE SVQQAV+FLKDPRV+ SDP+RA++FLRQKGIS+EELREAYRR GLPFP    Q + HP +P H +P       PPP   P+   P  TRPSWVSVF G+TAAAG+YTA+RELLRRY+VPLYFPDAARIAEERRLREE+TFLAQ+R IAELRERIQDLLASSEKT+DQ+EHLSKSISSS+ALRERELS ASELRDAI+QLS SVT SGNTETSR+ RPS +  VD+  +Q ILN AQK+GSLAYTH  QTDTS  RKSVDIQT DV      +    +SA+  PVS++HVD F SA+E      G   D  DDFM +KPAEVD++W ++ FK RE  ++     +  ++  +PHDSIENGVI   +++   +F+E        G+D++ GLRVAIAR+LFQS++MREA+N V      S  R RPVSMP L+ PLSD E
Sbjct:    1 MNDPFEEPSSHSAPPSTTREPSVQQAVSFLKDPRVKNSDPTRAISFLRQKGISEEELREAYRRVGLPFPHTPPQHVSHPPVPAHMYPPIAQFQGPPP---PMHPVPANTRPSWVSVFFGITAAAGIYTAIRELLRRYIVPLYFPDAARIAEERRLREEHTFLAQERHIAELRERIQDLLASSEKTNDQMEHLSKSISSSMALRERELSHASELRDAIQQLSRSVTVSGNTETSRLARPSLDTQVDNTTNQHILNQAQKNGSLAYTHMNQTDTSLFRKSVDIQTDDVT---GRVTHEISSAKELPVSDAHVDAFSSADESKFIPGGKEVDVGDDFMTIKPAEVDDSWISETFKPREAGNDKQKSHLHPANLPRPHDSIENGVIGGTADTEHREFTEAAASDTAGGIDQSSGLRVAIARELFQSEVMREARNAVKPDSIPSAPRARPVSMPQLDTPLSDPE 453          
BLAST of Gvermi4293.t1 vs. uniprot
Match: M2XC77_GALSU (Peroxisomal membrane protein PEX14 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XC77_GALSU)

HSP 1 Score: 87.4 bits (215), Expect = 7.160e-15
Identity = 74/238 (31.09%), Postives = 113/238 (47.48%), Query Frame = 0
Query:   18 VRESSVQQAVTFLKDPRVRRSDPSRALAFLRQKGISDEELREAYRREGLPFPQ-------------------AIAQPLPHPHLPQHPFPV--------------------------------APPPFPGPLQVRPVATRP--------SWV--SVFLGLTAAAGVYTALRELLRRYVVPLYFPDAAR--IAEERRLREENT-----FLAQQRQIAELRERIQDLLASSEKTSDQVEHL 187
            +RE  V++AV+FL+ P+V+ +   R L FLR+KG++DEE+REA++R G  +P+                    +   +P    P    P                                  P PF     V P  T P        SW   +VFLG  AAAG++ ALRELLR+YVVPLYFP+A    I +++  RE+       +L QQ  + EL+  +++L+ ++E+ +D +E L
Sbjct:    2 IREEEVKKAVSFLEHPQVKPTAGQRKLDFLRRKGLTDEEIREAFQRAGQTYPEDTFSGNAEVEKLDSAAKTTTVPDSVPKSFAPNENTPSQQIAQVPSGKVNSNNFSSNQWTMAQPGGGGVWVPQPF---AYVTPQVTSPQQPQQKERSWSVGNVFLGAGAAAGLFLALRELLRKYVVPLYFPEARSRDIGKQKLFREDEKDEGRKYLEQQ--VDELKTSVKNLVKATERNNDMIEEL 234          
BLAST of Gvermi4293.t1 vs. uniprot
Match: A0A5J4Z722_PORPP (Peroxisomal membrane protein PEX14 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z722_PORPP)

HSP 1 Score: 83.2 bits (204), Expect = 2.270e-13
Identity = 65/207 (31.40%), Postives = 104/207 (50.24%), Query Frame = 0
Query:   18 VRESSVQQAVTFLKDPRVRRSDPSRALAFLRQKGISDEELREAYRREGLPFPQ-------------------AIAQPLPH--PHLPQHPFPVAPPP--------FPGPLQVR-PVATRP---SWVSVFLGLTAAAGVYTALRELLRRYVVPLYFPDAARIAEERRLREENTFLAQQRQIAELRERIQDLLASSEKTSDQVEHLSKSI 191
            VRE  V  AV+FL D RV+ +  +R +AFL++K ++D E+REA++R G  +P+                   A A   PH  P +P    P    P        +PG  Q +  VAT     +W+   L   +A G    LRELLR+YVVPLYFP+ +     R  +E+ T      ++ EL+  + +L  ++++  + +EH+ +S+
Sbjct:   41 VREDQVAMAVSFLNDARVKEAPAARCVAFLKRKALNDSEIREAFKRVGREYPEEAEVERSETQMKQSAAVAAAAAANPPHSAPVMPYAQQPALMIPQGAQLRLEYPGEAQRQLAVATNSRTKNWMIGVLSAGSAVGALMVLRELLRKYVVPLYFPEESSAPAARAEQEKAT------ELRELKATLNELAKTTKRQQEYIEHVERSV 241          
BLAST of Gvermi4293.t1 vs. uniprot
Match: R7Q860_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q860_CHOCR)

HSP 1 Score: 78.6 bits (192), Expect = 3.270e-13
Identity = 83/268 (30.97%), Postives = 107/268 (39.93%), Query Frame = 0
Query:  195 IALRERELSQASELRDAIRQLSHSVTASGNTET-SRIIRPSPERDVDSNLSQRILNHAQKSGSLAYTHGKQTDTSRLRKSVDIQTVDVNTDGDSIPQGSNSARVTPVSESHVDHFVSAEEGNHNSEGNPFDGADDFMAMKPAEVDENWKAKVFKSREYESEGPVQEVCVSDTQKPHDSIENGVIARNSESGRVQFSEEDEMGVLTGVDENKGLRVAIARQLFQSDMMREAKNVVSSSQTSSEH-------RVRPVSMPPLEIPLSDAE 454
            +A+RER LS+ SEL++AIRQ+SHSVTASG T + SR    +   D D        + A+K+GSLAYTH    D    R S D         G +  +G   A                               D+FMA+ PAEV+E+W                                                     G   G DE  G     ARQLFQS++M+EA+  +  + T SE        R R VSMP LE+PLSD E
Sbjct:    1 MAVRERTLSENSELQNAIRQISHSVTASGGTGSRSRGRVANGGEDGDKRFDYLTGSGARKNGSLAYTH---VDKFNFRVSGD--------KGQTAEEGEEEAXXXXX----XXXXXXXXXXXXXXXXXXXXDQDEFMAIAPAEVEESW-----------------------------------------------------GGEEGKDEGAGWGKRTARQLFQSEVMKEARLAMDGTSTMSESGTDGSKGRGRVVSMPQLEVPLSDEE 200          
BLAST of Gvermi4293.t1 vs. uniprot
Match: A0A7S1T5W1_9RHOD (Peroxisomal membrane protein PEX14 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T5W1_9RHOD)

HSP 1 Score: 68.2 bits (165), Expect = 8.040e-9
Identity = 50/150 (33.33%), Postives = 72/150 (48.00%), Query Frame = 0
Query:   18 VRESSVQQAVTFLKDPRVRRSDPSRALAFLRQKGISDEELREAYRREGLPFP-------QAIAQPLPHPHLPQHPFPVAPPPFPGPLQVRPVA--------------------TRPSWVSVFLGLTAAAGVYTALRELLRRYVVPLYFPD 140
            VRE+ V  AV FL D RV+ +  +RA  FL++KG++ +E+ EA+RR G   P        A + P P         P A    P  + V P                      +R +W +  + + A AGV   +RELL++YVVPLYFP+
Sbjct:    2 VREAEVTNAVRFLNDTRVKAAPATRAAQFLKRKGLTKDEIEEAFRRAGREAPPPGWENESAASAPEPSKE------PTASSGVPSQMIVLPKGARIVMPEEATASDESAQMSRSRKTW-NALVHIAAGAGVLMMIRELLKKYVVPLYFPE 144          
BLAST of Gvermi4293.t1 vs. uniprot
Match: A0A7S1ETF9_9RHOD (Peroxisomal membrane protein PEX14 (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETF9_9RHOD)

HSP 1 Score: 64.3 bits (155), Expect = 2.760e-8
Identity = 50/160 (31.25%), Postives = 74/160 (46.25%), Query Frame = 0
Query:   14 AASGVRESSVQQAVTFLKDPRVRRSDPSRALAFLRQKGISDEELREAYRREGLPFP------------------------QAIAQPLPHP--HLPQHPFPVAPPPFPGPLQVRPVA-------TRPSWVSVFLGLTAAAGVYTALRELLRRYVVPLYFPD 140
            + S VRE  V+ AV FL+D RV+ +  +R +AFL +K ++ +E+REA++R     P                        Q + Q +P+   +   HP P    P    +++           T P W SV L      G    +RELLR+YVVPLYFP+
Sbjct:    5 SGSHVREDQVEMAVKFLQDERVKSAPAARCVAFLERKALTMDEIREAFKRVNRELPSSTEINDAKANFPKSTDTNTTLHSQQMQQNVPNQMFYPMHHPQPSILLPEGSQIKILQKGEVQSGNTTVPRWHSVALITIGVVGGLAVVRELLRKYVVPLYFPE 164          
BLAST of Gvermi4293.t1 vs. uniprot
Match: A0A7J7IIB2_9RHOD (Peroxisomal membrane protein PEX14 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IIB2_9RHOD)

HSP 1 Score: 63.5 bits (153), Expect = 4.190e-8
Identity = 50/133 (37.59%), Postives = 68/133 (51.13%), Query Frame = 0
Query:   18 VRESSVQQAVTFLKDPRVRRSDPSRALAFLRQKGISDEELREAYRREGLPFPQAIAQPLPHPHLPQHPFPVAPPPFPGPLQVRPVATRP---SWVSVFLGLTAAAGVYTALRELLRRYVVPLYFPDAARIAEE 147
            +RE  VQ+AV FL+   V  +D + A  FLR KG S+EEL EA++R G  F      P P    P  P       F G L  R  + R    +W   +    A + + + LRE LR+YVVPLY+PD  R+  +
Sbjct:    1 MREDWVQRAVEFLRHQSV--TDATEAAQFLRSKGFSEEELDEAWKRAGGKFGTGSRPPRP----PDSPAAEMAEGF-GALAARQPSERSGSRAWTWAWRVALAVSAI-SLLREFLRKYVVPLYYPDQRRMVRK 125          
BLAST of Gvermi4293.t1 vs. uniprot
Match: A0A0L0H7V9_SPIPD (Peroxisomal membrane protein PEX14 n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0H7V9_SPIPD)

HSP 1 Score: 65.5 bits (158), Expect = 7.650e-8
Identity = 44/136 (32.35%), Postives = 68/136 (50.00%), Query Frame = 0
Query:   19 RESSVQQAVTFLKDPRVRRSDPSRALAFLRQKGISDEELREAYRREGLPFPQAIAQPLPHPHLPQHPFPVAPPPFPGP----------------LQVRPVAT---RPSWVSVFLGLTAAAGVYTALRELLRRYVVP 135
            R+  + QAV+FL+ P VR S   R +AFL+QKG+++EE++ A  R G   PQ ++  +  P LP + FP +    P P                 QV+ + T   +  W +V L L  + G  +AL   +R Y +P
Sbjct:  115 RQDMIAQAVSFLQSPNVRSSPQERKVAFLKQKGLTEEEIQLATSRAGTSQPQPVSN-ISQPALPTNAFPPSSGYVPSPATSVPTSGQGLPTNRPFQVQSIPTTSRKEMWKNVLLALILSGGALSALVAFIRHYHIP 249          
BLAST of Gvermi4293.t1 vs. uniprot
Match: M1V5S5_CYAM1 (Pex14_N domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V5S5_CYAM1)

HSP 1 Score: 62.4 bits (150), Expect = 2.110e-7
Identity = 48/130 (36.92%), Postives = 67/130 (51.54%), Query Frame = 0
Query:   18 VRESSVQQAVTFLKDPRVRRSDPSRALAFLRQKGISDEELREAYRREGLPFPQAIAQPLPHPHLPQHPFPVAPPPFPGPLQVRPVATRPSWVSVFLGLTAAAGVYTALRELLRRYVVPLYFPDAARIAEE 147
            +RE  VQ+AV FL++  V+  DP +A  FLR KG ++EEL EA+RR G  F +    P P      + +   PP   G       A   +W   +  L    G  + LRE LR+YVVP YFP   + A++
Sbjct:    1 MREDWVQRAVEFLQNDVVK--DPVQAAQFLRAKGYTEEELAEAWRRAGNKFGEESKPPPPLDLSLGNGY--VPPAAVGVGVQSKRAVPGAWTWAWR-LALTVGAISVLREFLRKYVVPAYFPQQNKAAKK 125          
BLAST of Gvermi4293.t1 vs. uniprot
Match: A0A2G8K1F9_STIJA (Peroxisomal membrane protein PEX14 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8K1F9_STIJA)

HSP 1 Score: 62.0 bits (149), Expect = 7.030e-7
Identity = 54/189 (28.57%), Postives = 90/189 (47.62%), Query Frame = 0
Query:   18 VRESSVQQAVTFLKDPRVRRSDPSRALAFLRQKGISDEELREAYRREGLPFPQAIAQPLPHPHLPQHPFPVAPPPFPGPLQVRPVATRPSWVSVFLGLTAAA----GVYTALRELLRRYVVPLYFPDAARIAEERRLREENTFLAQQRQ-----IAELRERIQDLLASSEKTSDQVEHLSKSISSSIAL 197
            +RE+ +  AV FL++P+V+ S  S+  AFL++KG++DEE+R A  R G+  P  +  P     L QH  P      PGPL         +  +      A A    GV   L +L +R++ P +         ++RL+     L Q        + E+ + +  + A+ EK   Q+E +S+ + +S AL
Sbjct:   62 LRENMISTAVKFLQNPQVQSSPLSQRRAFLKKKGLTDEEIRSAIERSGVKEPSPLPSPQGGQQLVQHAGPTGGMMVPGPLPXXXXXXXRTIYARGRDFAAIAIIISGVTYGLYKLFQRFIRPFFSKQRE---SDKRLQNIEASLVQVNSTLTATVQEIEKSVGLIRATLEKQESQLEQISRDVIASKAL 247          
The following BLAST results are available for this feature:
BLAST of Gvermi4293.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3J127_9FLOR7.180e-17260.78Peroxisomal membrane protein PEX14 n=1 Tax=Gracila... [more]
M2XC77_GALSU7.160e-1531.09Peroxisomal membrane protein PEX14 n=1 Tax=Galdier... [more]
A0A5J4Z722_PORPP2.270e-1331.40Peroxisomal membrane protein PEX14 n=1 Tax=Porphyr... [more]
R7Q860_CHOCR3.270e-1330.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1T5W1_9RHOD8.040e-933.33Peroxisomal membrane protein PEX14 n=1 Tax=Compsop... [more]
A0A7S1ETF9_9RHOD2.760e-831.25Peroxisomal membrane protein PEX14 (Fragment) n=1 ... [more]
A0A7J7IIB2_9RHOD4.190e-837.59Peroxisomal membrane protein PEX14 n=1 Tax=Cyanidi... [more]
A0A0L0H7V9_SPIPD7.650e-832.35Peroxisomal membrane protein PEX14 n=1 Tax=Spizell... [more]
M1V5S5_CYAM12.110e-736.92Pex14_N domain-containing protein n=2 Tax=cellular... [more]
A0A2G8K1F9_STIJA7.030e-728.57Peroxisomal membrane protein PEX14 n=1 Tax=Stichop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 156..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 425..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..274
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 12..72
e-value: 2.4E-13
score: 51.3
IPR006785Peroxisome membrane anchor protein Pex14p, N-terminalPFAMPF04695Pex14_Ncoord: 19..60
e-value: 7.5E-12
score: 44.7
IPR025655Peroxisomal membrane protein 14PANTHERPTHR23058PEROXISOMAL MEMBRANE PROTEIN PEX14coord: 12..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1064726..1066188 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4293.t1Gvermi4293.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1064726..1066188 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4293.t1 ID=Gvermi4293.t1|Name=Gvermi4293.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=455bp
MSDPFEDSATPLPAASGVRESSVQQAVTFLKDPRVRRSDPSRALAFLRQK
GISDEELREAYRREGLPFPQAIAQPLPHPHLPQHPFPVAPPPFPGPLQVR
PVATRPSWVSVFLGLTAAAGVYTALRELLRRYVVPLYFPDAARIAEERRL
REENTFLAQQRQIAELRERIQDLLASSEKTSDQVEHLSKSISSSIALRER
ELSQASELRDAIRQLSHSVTASGNTETSRIIRPSPERDVDSNLSQRILNH
AQKSGSLAYTHGKQTDTSRLRKSVDIQTVDVNTDGDSIPQGSNSARVTPV
SESHVDHFVSAEEGNHNSEGNPFDGADDFMAMKPAEVDENWKAKVFKSRE
YESEGPVQEVCVSDTQKPHDSIENGVIARNSESGRVQFSEEDEMGVLTGV
DENKGLRVAIARQLFQSDMMREAKNVVSSSQTSSEHRVRPVSMPPLEIPL
SDAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR006785Pex14_N
IPR025655PEX14