Gvermi8208.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8208.t2
Unique NameGvermi8208.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length106
Homology
BLAST of Gvermi8208.t2 vs. uniprot
Match: A0A2V3IGY7_9FLOR (NADH-u_ox-rdase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGY7_9FLOR)

HSP 1 Score: 170 bits (431), Expect = 3.710e-53
Identity = 79/104 (75.96%), Postives = 90/104 (86.54%), Query Frame = 0
Query:    1 MAHPINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAGRPVVMRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAKYGPKKIASESS 104
            MAHPINDP FP+ID DP+FGKVMS+ R SDW+NA LAT +S+PFGYAAGRPV+MRPSMYMAG+IGASFGLFLGFQNSF RLTGYKENA E AK+  +K  S +S
Sbjct:    1 MAHPINDPKFPVIDRDPSFGKVMSAFRTSDWQNATLATVLSVPFGYAAGRPVLMRPSMYMAGIIGASFGLFLGFQNSFARLTGYKENAAEAAKFASEKSVSGTS 104          
BLAST of Gvermi8208.t2 vs. uniprot
Match: R7Q7T4_CHOCR (NADH-ubiquinone oxidoreductase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7T4_CHOCR)

HSP 1 Score: 146 bits (368), Expect = 1.120e-42
Identity = 71/105 (67.62%), Postives = 84/105 (80.00%), Query Frame = 0
Query:    1 MAHPINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAGRPVVMRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAKYGPKKIASESSA 105
            M +PIN PT  +I  DP+FG+VMS+ RA DW+N ALAT +S+PFGY AGRP+VMRPSMY A  IGA FGL LGFQ+SF RLTGYKENA+EVAKY P + A ES+A
Sbjct:   68 MTYPINPPTHQVITRDPSFGQVMSAFRAGDWQNLALATGISMPFGYWAGRPIVMRPSMYAAATIGALFGLSLGFQSSFARLTGYKENALEVAKYSPSQSA-ESTA 171          
BLAST of Gvermi8208.t2 vs. uniprot
Match: A0A7S0WTB3_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WTB3_9CHLO)

HSP 1 Score: 68.6 bits (166), Expect = 7.200e-13
Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 0
Query:    1 MAHPINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAGRPV--VMRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAKY 94
            M   +++P + +ID  P   K   +    D + AA ATF +  +G  AG+ V  +  PS YM   IG + G  L +QNS GRL G+KEN  EVAK+
Sbjct:    1 MGIILDEPKYKVIDSAPGLAKCFGNCSFEDMKIAAGATFAATTYGCLAGKGVKGMAGPSAYMGLAIGVTAGALLAYQNSAGRLMGFKENPDEVAKF 96          
BLAST of Gvermi8208.t2 vs. uniprot
Match: A0A6V2QQX1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2QQX1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 9.310e-13
Identity = 37/96 (38.54%), Postives = 54/96 (56.25%), Query Frame = 0
Query:    4 PINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAGRPVVMRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAKYGPKKI 99
            P +DP FP+++ DP+    ++SLR  D+      T  S  +GY  G+P+    +   A  IG +F  F+  Q++  RL GYKEN +EV KYG  KI
Sbjct:    2 PYSDPKFPVVNNDPSVDDCINSLRKRDYMALFGLTGASWGYGYMVGKPL-RGATASTAAAIGFTFASFVVLQDTRSRLLGYKENGVEVKKYGLCKI 96          
BLAST of Gvermi8208.t2 vs. uniprot
Match: A0A0L0D2G3_THETB (NADH-u_ox-rdase domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D2G3_THETB)

HSP 1 Score: 61.6 bits (148), Expect = 3.050e-10
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0
Query:    4 PINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAGRPVVMRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAKY 94
            P     +P+++  P   + +++    D    AL T +SLPFG+A G+P+ M+ +M MAG IG   G    +QN+ GRL G  EN  EV ++
Sbjct:    5 PAGATPYPVVNAAPNVAETVANFSMGDVSKWALMTGLSLPFGWAIGKPIRMQ-TMVMAGSIGFVGGFMWAYQNAAGRLMGTFENKSEVKRH 94          
BLAST of Gvermi8208.t2 vs. uniprot
Match: B8BVH7_THAPS (NADH-u_ox-rdase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVH7_THAPS)

HSP 1 Score: 60.8 bits (146), Expect = 1.270e-9
Identity = 36/94 (38.30%), Postives = 48/94 (51.06%), Query Frame = 0
Query:    4 PINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAGRPVVMR-PSMYMA-GLIGASFGLFLGFQNSFGRLTGYKENAIEVAKYG 95
            P  DP F +++  P   + + SLR SD+  A   T  S  +GY  G+P  M   S  MA G+  A   +    QN   RL GY+EN +EV KYG
Sbjct:    2 PYGDPKFTVVNPSPDVDQTLRSLRTSDYLLATFITSASWAYGYTMGKPTRMACASTAMALGMTAAGMAVL---QNGRSRLRGYRENEVEVKKYG 92          
BLAST of Gvermi8208.t2 vs. uniprot
Match: A0A8H7VPA5_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VPA5_9FUNG)

HSP 1 Score: 59.7 bits (143), Expect = 6.730e-9
Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 0
Query:   10 FPIIDGDPTFGKVMSSLRASDWRNAALATFVS--LPFGYAAGRPVV----MRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAK 93
            FP+ID DP+FG+V+ + R +D+   A +T ++     G     PV     +R  + ++ L GA  G  L +QNS  R  G+KENAIEV K
Sbjct:   10 FPVIDTDPSFGRVVRNFRTTDYATLAASTAIAPAAVIGLEKFNPVAAGRSLRIPIRLSVLFGAFGGFLLAYQNSSLRFWGWKENAIEVTK 99          
BLAST of Gvermi8208.t2 vs. uniprot
Match: UPI001E8DC5F8 (NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit-domain-containing protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=UPI001E8DC5F8)

HSP 1 Score: 53.9 bits (128), Expect = 1.070e-6
Identity = 33/88 (37.50%), Postives = 45/88 (51.14%), Query Frame = 0
Query:   10 FPIIDGDPTFGKVMSSLRASDWRN--AALATFVSLPFGYAAGRP--VVMRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAK 93
            +P+ID DPTFG+V+  +R SD+    AA A   +  +G     P     R +M + G +G S G  L +Q S  R  G  ENA E  K
Sbjct:   10 YPVIDADPTFGRVVRYMRPSDYATWAAAAAAGPAAFWGLERVDPSRASTRSAMKLVGFLGVSAGFLLAYQRSSFRFMGLSENASEAKK 97          
BLAST of Gvermi8208.t2 vs. uniprot
Match: A0A146I4X4_9AGAR (Uncharacterized protein n=2 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146I4X4_9AGAR)

HSP 1 Score: 53.9 bits (128), Expect = 1.380e-6
Identity = 32/97 (32.99%), Postives = 46/97 (47.42%), Query Frame = 0
Query:   10 FPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAGRPVV-------------MRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAK 93
            +P+ID DPT G+V++ +R SD+   A         GY AG P +             MRP MY   ++G   G F+ +  S  R  G+ EN  EV +
Sbjct:   17 YPLIDTDPTAGRVLAYMRPSDYAQWA---------GYTAGTPALLYAWEKIDRTGGRMRPYMYTGAVLGCVAGFFVAYSRSTKRFWGWTENEREVKR 104          
The following BLAST results are available for this feature:
BLAST of Gvermi8208.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IGY7_9FLOR3.710e-5375.96NADH-u_ox-rdase domain-containing protein n=1 Tax=... [more]
R7Q7T4_CHOCR1.120e-4267.62NADH-ubiquinone oxidoreductase n=1 Tax=Chondrus cr... [more]
A0A7S0WTB3_9CHLO7.200e-1339.58Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A6V2QQX1_9STRA9.310e-1338.54Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A0L0D2G3_THETB3.050e-1036.26NADH-u_ox-rdase domain-containing protein n=1 Tax=... [more]
B8BVH7_THAPS1.270e-938.30NADH-u_ox-rdase domain-containing protein n=1 Tax=... [more]
A0A8H7VPA5_9FUNG6.730e-938.89Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
UPI001E8DC5F81.070e-637.50NADH-ubiquinone oxidoreductase complex I, 21 kDa s... [more]
A0A146I4X4_9AGAR1.380e-632.99Uncharacterized protein n=2 Tax=Mycena chlorophos ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019721NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminalPFAMPF10785NADH-u_ox-rdasecoord: 8..86
e-value: 2.0E-19
score: 70.1
NoneNo IPR availablePANTHERPTHR34062:SF1OXIDOREDUCTASE 21 KDA SUBUNIT, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G04750)-RELATEDcoord: 6..98
NoneNo IPR availablePANTHERPTHR34062OXIDOREDUCTASE 21 KDA SUBUNIT, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G04750)-RELATEDcoord: 6..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..105
NoneNo IPR availableTMHMMTMhelixcoord: 52..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:1568127..1568549 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8208.t2Gvermi8208.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 1568127..1568549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8208.t2 ID=Gvermi8208.t2|Name=Gvermi8208.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=106bp
MAHPINDPTFPIIDGDPTFGKVMSSLRASDWRNAALATFVSLPFGYAAGR
PVVMRPSMYMAGLIGASFGLFLGFQNSFGRLTGYKENAIEVAKYGPKKIA
SESSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019721NADH-UbQ_OxRdtase_su21_N