Gvermi8037.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8037.t1
Unique NameGvermi8037.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length345
Homology
BLAST of Gvermi8037.t1 vs. uniprot
Match: A0A2V3IHJ4_9FLOR (Transcription factor TFIIIB component B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHJ4_9FLOR)

HSP 1 Score: 230 bits (587), Expect = 4.320e-70
Identity = 164/334 (49.10%), Postives = 192/334 (57.49%), Query Frame = 0
Query:   17 TVRHADAVGLANNGQITINEVIRNIRKRKNRKQMPSTARRNEQRRQRRRTGAPQPQPLEAGHQVPQAEPASPXXXXXXXP------DTAVVAPQLTLDENGNIVVDSSSLVVSAGTVINAETEGGDVTTFENYEYTKHITSATFSKRQNSTKWLAEETDRFYECLRKYGTDFLLMESDFPTRSRRQLKLKFKREERENPCRIDNALRATPLPLPTSLPKRPAAPDDQQTENTSREEQDTPPDAAGDTPPAPDLTATAPASHSQKIADVQAAQAQANDASDTEVKDDENSDNEATREAVIKVVGTADDDPDMQDVDMNAMPLITAESDDSWGDSD 344
            T+ H+DA GLAN GQITI +VIRNIRKRKN K MPSTARRN +RRQ                          XXXXXXX         AVVAPQLTLDENGNIVVD +SLV+SAG+V NAE E G+VTTFEN+EYTKHITSAT+SKR++S+KWLA ETDRF++CL+KYGTDFLLM+ +FP+R+RRQLKLKFKREER+NP RID AL   PL LPT                                 PAP                                  +E + +EAT E V KVVG A+            +P+   +SDDSWGDSD
Sbjct:   18 TLPHSDANGLANGGQITIKDVIRNIRKRKNGKPMPSTARRNLERRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAAVVAPQLTLDENGNIVVDRASLVISAGSVTNAEAESGNVTTFENHEYTKHITSATYSKRKSSSKWLASETDRFFQCLQKYGTDFLLMQREFPSRNRRQLKLKFKREERDNPHRIDLALHGPPLALPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPDDPAPQ---------------------------------EEGAHHEATSEVVTKVVGPAEXXXXXHADAHPTVPIGVVDSDDSWGDSD 318          
BLAST of Gvermi8037.t1 vs. uniprot
Match: R7QQ09_CHOCR (Myb-like domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ09_CHOCR)

HSP 1 Score: 165 bits (418), Expect = 1.100e-45
Identity = 109/213 (51.17%), Postives = 130/213 (61.03%), Query Frame = 0
Query:   50 MPSTARRNEQRRQRRRTGAPQPQPLEAGHQV---PQAEPASPXXXXXXXP----------------------DTAVVAPQLTLDENGNIVVDSSSLVVSAGTVINAETEGGDVTTFENYEYTKHITSATFSKRQNSTKWLAEETDRFYECLRKYGTDFLLMESDFPTRSRRQLKLKFKREERENPCRIDNALRATPLPLPTSLPKRPAAPDDQ 237
            MPST +RN+ RR+RRR  A    P E G Q     +A  A P                              D  VVAPQ+T+DE+GNIV+D SSLVVSAGT  NAE + G VT  EN+ ++ HITSAT+SKR+ + KW   ET++FYE LRK+GTDF LMES FP R+RRQLKLKFKREERE P ++D AL   PLPLPT L   P AP  Q
Sbjct:    1 MPSTVQRNKDRRKRRRRVAQGLPPEEDGEQTGGNQEATDARPREVEGGEAENNTEKEXXXXXXXXXXXXXXXDEDVVAPQVTIDEDGNIVIDQSSLVVSAGTATNAELDRGAVTV-ENHAFSTHITSATYSKREAAMKWELVETNQFYEALRKFGTDFSLMESSFPKRTRRQLKLKFKREEREFPEKVDKALNEPPLPLPT-LKLAPTAPTTQ 211          
BLAST of Gvermi8037.t1 vs. uniprot
Match: UPI001E1DF89D (uncharacterized protein LOC123544327 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF89D)

HSP 1 Score: 124 bits (310), Expect = 3.290e-28
Identity = 60/118 (50.85%), Postives = 87/118 (73.73%), Query Frame = 0
Query:  100 VVAPQLTLDENGNIVVDSSSLVVSAGTVINAETEGGDVTTFENYEYTKHITSATFSKRQNSTKWLAEETDRFYECLRKYGTDFLLMESDFPTRSRRQLKLKFKREERENPCRIDNALR 217
            VVAP++T+D++GNIV+D  SLVVSA    +AE +   +   +N   T+HITSATFS+R ++ KW  ++ ++F+  L ++GTDF L+E  FPTR+RRQ+KLKFKREER+N  R+D  L+
Sbjct:  173 VVAPKVTIDDDGNIVIDKESLVVSATATSSAELDQARLVLVDNNAMTRHITSATFSRRDSAQKWEPDDDEKFFHALSRFGTDFSLIEHVFPTRTRRQIKLKFKREERKNRARVDACLK 290          
BLAST of Gvermi8037.t1 vs. uniprot
Match: A0A7S1EPR8_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPR8_9RHOD)

HSP 1 Score: 107 bits (266), Expect = 1.370e-23
Identity = 75/203 (36.95%), Postives = 113/203 (55.67%), Query Frame = 0
Query:   25 GLANNGQITINEVIRNIRKRKNRKQMPSTAR----RNEQRRQRRRTGAPQPQPLEAGHQVPQAEP-ASPXXXXXXXPDTAVVAPQLTLDENGNIVVDSSSLVVSAGTVINAETEGGDVTTFENYEYTK----HITSATFSKRQNSTKWLAEETDRFYECLRKYGTDFLLMESDFPTRSRRQLKLKFKREERENPCRIDNALRA 218
            G+  +  I I+E+I+N+RK+ N K MPST +    +  +R  +R       QP    H+  Q +   S             +APQL  D++GNIV+D +SLVV+ G         GD    +  E  +    H++SA+FSKRQ ++ W  +ET+ FY+ LRK+GT+F LMES    R+R+ +K KF REE+ +P R+D AL +
Sbjct:   20 GVVESCDIQIHEMIKNLRKKNNTKSMPSTVKERIDKKHKRNAQRLLSQDSNQPAGESHRQQQKQQNESGIQRNSLAARNHSLAPQLRFDDDGNIVIDEASLVVTMGV------PSGDELALQQMEAVEVGMNHVSSASFSKRQYASPWSQQETELFYDALRKFGTEFGLMESVLKGRTRKMIKNKFIREEKAHPMRVDAALNS 216          
BLAST of Gvermi8037.t1 vs. uniprot
Match: M2VXJ2_GALSU (Transcription factor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXJ2_GALSU)

HSP 1 Score: 91.7 bits (226), Expect = 3.130e-18
Identity = 55/131 (41.98%), Postives = 79/131 (60.31%), Query Frame = 0
Query:  101 VAPQLTLDENGNIVVDSSSLVVSAGTVINAETEGGDVTTFENYEYTKHITSATFSKRQNSTKWLAEETDRFYECLRKYGTDFLLMESDFPTRSRRQLKLKFKREERENPCRIDNAL--RAT-PLPLPTSLP 228
            +APQL  D+ GNI VD  SL+V+       E++   V    +      + SAT+SKR  + +W  EET+ FY  L+++GTDF L+   FP R+R+Q+K KFKREE+  P ++D AL  R T  +PL T +P
Sbjct:   71 MAPQLKFDDEGNITVDEDSLIVATDAPTQVESQVVRVVNGPD-----RVNSATYSKRTTTERWTKEETELFYRGLQQFGTDFSLVAQLFPKRNRKQVKAKFKREEKIAPDKVDAALSLRTTVSVPLETLVP 196          
BLAST of Gvermi8037.t1 vs. uniprot
Match: S9PZX9_SCHOY (Transcription factor TFIIIB complex subunit bdp1 n=1 Tax=Schizosaccharomyces octosporus (strain yFS286) TaxID=483514 RepID=S9PZX9_SCHOY)

HSP 1 Score: 92.4 bits (228), Expect = 5.140e-17
Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 0
Query:  110 NGNIVVDSSSLVVSAGTVINAETEGGDVTTFENYEYTKHITSATFSKRQNSTKWLAEETDRFYECLRKYGTDFLLMESDFPTRSRRQLKLKFKREERENPCRIDNALR 217
            +G IV+D +SL V          E  +    E    ++ +TSAT+  RQ S KW ++ETD+FY+ L ++GTDF L+ + FP+R+RRQ+KLKFK+EE+ NP RI+ ALR
Sbjct:  317 DGQIVLDEASLEVDRHERDYVPEEDREFV--EENALSRRVTSATWGNRQKSEKWKSDETDKFYKALSQWGTDFALISNMFPSRNRRQIKLKFKQEEKRNPARINEALR 422          
BLAST of Gvermi8037.t1 vs. uniprot
Match: A0A0D2WUN8_CAPO3 (Myb-like domain-containing protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WUN8_CAPO3)

HSP 1 Score: 92.4 bits (228), Expect = 7.500e-17
Identity = 54/120 (45.00%), Postives = 71/120 (59.17%), Query Frame = 0
Query:   98 TAVVAPQLTLDENGNIVVDSSSLVVSAGTVINAETEGGDVTTFENYEYTKHITSATFSKRQNSTKWLAEETDRFYECLRKYGTDFLLMESDFPTRSRRQLKLKFKREERENPCRIDNALR 217
            T V+APQLT+D  GNIV+   SLVV+  T+       G+       E     T A++ KR  + +W  +ET RF+E L   GTDF L+   FP R RRQ++ K+KREEREN  R+D ALR
Sbjct:  509 TNVIAPQLTIDAEGNIVMAKDSLVVTTTTIAPEAKVVGEAIK----ETGVMSTYASYLKRSKAERWTPQETARFFEVLSMVGTDFSLVNQFFPDRDRRQIRNKYKREERENRARVDYALR 624          
BLAST of Gvermi8037.t1 vs. uniprot
Match: A0A3N4HQP3_ASCIM (Myb_DNA-bind_7 domain-containing protein (Fragment) n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4HQP3_ASCIM)

HSP 1 Score: 84.3 bits (207), Expect = 1.230e-16
Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 0
Query:  110 NGNIVVDSSSLVVSAGTVINAETEGGDVTTFENYEYTKHITSATFSKRQNSTKWLAEETDRFYECLRKYGTDFLLMESDFPTRSRRQLKLKFKREERENPCRIDNALR 217
            +G + +D SS VVS  T      +G  +   E  E T+ + SAT+ KRQ S +W  EET++FYE L K+GTDF ++     TR+RR ++ KFKREER +P R+  ALR
Sbjct:    3 DGKLSIDHSSTVVSRTTF-----DGSLLEANEEDERTRLVNSATYGKRQKSDRWGYEETEKFYEGLTKFGTDFEMLAKWIKTRTRRMIRAKFKREERIDPGRVTEALR 105          
BLAST of Gvermi8037.t1 vs. uniprot
Match: S9VTF3_SCHCR (Transcription factor TFIIIB complex subunit bdp1 n=1 Tax=Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691) TaxID=653667 RepID=S9VTF3_SCHCR)

HSP 1 Score: 90.9 bits (224), Expect = 1.710e-16
Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = 0
Query:  110 NGNIVVDSSSLVVSAGTVINAETEGGDVTTFENYEYTKHITSATFSKRQNSTKWLAEETDRFYECLRKYGTDFLLMESDFPTRSRRQLKLKFKREERENPCRIDNALR 217
            +G IV+D +SL +          E  +    E    ++ +TSAT+  RQ S KW A+ET++FY+ L ++GTDF L+ + FP R+RRQ+KLKFK+EE+ NP RI+ ALR
Sbjct:  319 DGQIVLDEASLEIDRHQRDYVPEEDREFV--EENALSRRVTSATWGNRQKSEKWKADETEKFYKALSQWGTDFALISNMFPIRNRRQIKLKFKQEEKRNPARINEALR 424          
BLAST of Gvermi8037.t1 vs. uniprot
Match: A0A2J6REM1_9HELO (Myb-like domain-containing protein (Fragment) n=1 Tax=Hyaloscypha variabilis F TaxID=1149755 RepID=A0A2J6REM1_9HELO)

HSP 1 Score: 88.2 bits (217), Expect = 1.970e-16
Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 0
Query:  110 NGNIVVDSSSLVVSAGTVINAETEGGDVTTFENYEYTKHITSATFSKRQNSTKWLAEETDRFYECLRKYGTDFLLMESDFPTRSRRQLKLKFKREERENPCRIDNALRATPLPL 223
            +G IV+D  +L +      NA  +  ++T  E  ++T+ ITS T+ K + S  W A   + FYECLR +GTDF ++ S FP R+RRQ+KLKF +EER NP +I  A+ A   P+
Sbjct:  114 DGQIVMDERTLQIDRQK--NAAAQRQELTEVEENDFTRVITSGTWMKMERSQVWDAAANELFYECLRTHGTDFEMIASYFPHRNRRQIKLKFNKEERNNPQKITRAMTAPKKPI 225          
The following BLAST results are available for this feature:
BLAST of Gvermi8037.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHJ4_9FLOR4.320e-7049.10Transcription factor TFIIIB component B n=1 Tax=Gr... [more]
R7QQ09_CHOCR1.100e-4551.17Myb-like domain-containing protein n=1 Tax=Chondru... [more]
UPI001E1DF89D3.290e-2850.85uncharacterized protein LOC123544327 n=1 Tax=Merce... [more]
A0A7S1EPR8_9RHOD1.370e-2336.95Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M2VXJ2_GALSU3.130e-1841.98Transcription factor n=1 Tax=Galdieria sulphuraria... [more]
S9PZX9_SCHOY5.140e-1745.37Transcription factor TFIIIB complex subunit bdp1 n... [more]
A0A0D2WUN8_CAPO37.500e-1745.00Myb-like domain-containing protein n=2 Tax=Capsasp... [more]
A0A3N4HQP3_ASCIM1.230e-1644.44Myb_DNA-bind_7 domain-containing protein (Fragment... [more]
S9VTF3_SCHCR1.710e-1644.44Transcription factor TFIIIB complex subunit bdp1 n... [more]
A0A2J6REM1_9HELO1.970e-1642.11Myb-like domain-containing protein (Fragment) n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 159..207
e-value: 1.2E-6
score: 38.0
IPR039467Transcription factor TFIIIB component B'', Myb domainPFAMPF15963Myb_DNA-bind_7coord: 153..218
e-value: 5.5E-25
score: 87.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR22929:SF0TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOGcoord: 50..217
NoneNo IPR availablePANTHERPTHR22929RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR Bcoord: 50..217
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 161..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:776060..777094 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8037.t1Gvermi8037.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 776060..777094 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8037.t1 ID=Gvermi8037.t1|Name=Gvermi8037.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=345bp
MSEPPYSDEDDDDATTTVRHADAVGLANNGQITINEVIRNIRKRKNRKQM
PSTARRNEQRRQRRRTGAPQPQPLEAGHQVPQAEPASPPPPEEEEPDTAV
VAPQLTLDENGNIVVDSSSLVVSAGTVINAETEGGDVTTFENYEYTKHIT
SATFSKRQNSTKWLAEETDRFYECLRKYGTDFLLMESDFPTRSRRQLKLK
FKREERENPCRIDNALRATPLPLPTSLPKRPAAPDDQQTENTSREEQDTP
PDAAGDTPPAPDLTATAPASHSQKIADVQAAQAQANDASDTEVKDDENSD
NEATREAVIKVVGTADDDPDMQDVDMNAMPLITAESDDSWGDSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR039467TFIIIB_B''_Myb
IPR009057Homeobox-like_sf