Gvermi7970.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7970.t1
Unique NameGvermi7970.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length181
Homology
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BLAST of Gvermi7970.t1 vs. uniprot
Match: A0A2V3ISU7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISU7_9FLOR)

HSP 1 Score: 206 bits (524), Expect = 5.150e-65
Identity = 110/179 (61.45%), Postives = 127/179 (70.95%), Query Frame = 0 
Query:    2 KFIFASTLAALIGWACATCIRQPVFEIWEALESGNLVCDGDGGGSSFEVNENTLTHKTFGPNSISPDRVVGLAPEMIPKTMRLEIVRTVLGSINKGASFIVADGIKYKFGGGVGQRRAFKEKFNVFQALVWAQENGNCPVDSKGQVFPQLASVRVSLQTLAAAFGIDYCLQAEFRRIGL 180
             F   +   ALI  A   CI QPVFE WEALES NL+C+GD GGS+F VNENTL HK  G  +   DRV  L   +IP  +RL IVR+  G+INK ASFI ADG  ++FGGG  QR  FK+ FNV QALV+AQE G CPVDSKG+ FPQLASVRVSLQTLAA FGI YCL+A+F R+ L
Sbjct:    3 SFTVVAVQLALICMAHGACISQPVFETWEALESANLICEGDAGGSAFRVNENTLVHKILGGVA---DRVPRLPASLIPTELRLVIVRSRSGAINKAASFIRADGKIFRFGGGRWQRGMFKKNFNVLQALVYAQEVGMCPVDSKGKTFPQLASVRVSLQTLAATFGIPYCLEADFNRVPL 178
The following BLAST results are available for this feature:
BLAST of Gvermi7970.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISU7_9FLOR5.150e-6561.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..180
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:344774..345316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7970.t1Gvermi7970.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 344774..345316 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7970.t1 ID=Gvermi7970.t1|Name=Gvermi7970.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=181bp
MKFIFASTLAALIGWACATCIRQPVFEIWEALESGNLVCDGDGGGSSFEV
NENTLTHKTFGPNSISPDRVVGLAPEMIPKTMRLEIVRTVLGSINKGASF
IVADGIKYKFGGGVGQRRAFKEKFNVFQALVWAQENGNCPVDSKGQVFPQ
LASVRVSLQTLAAAFGIDYCLQAEFRRIGL*
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