Gvermi4351.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi4351.t1
Unique Name	Gvermi4351.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	92

Homology

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BLAST of Gvermi4351.t1 vs. uniprot
Match: R7Q7D3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7D3_CHOCR)

HSP 1 Score: 73.6 bits (179), Expect = 2.540e-15
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 0

Query:   18 PRSHFFTFGLPFLTFMVAGHWALTYVTQGRYDVRDEKERQQALMTSEGRVVIPEEA----LKVPPKPSQQYEMKPVPR 91
            P   F TFGLPFLTFMVAG   L Y+ +GRY+V+DE  +QQALM++E +VV+P       L++PP     Y++ PVPR
Sbjct:    4 PAKPFLTFGLPFLTFMVAGLQGLAYINRGRYEVKDEVAKQQALMSTENKVVLPPRRNLAELEIPPV--TDYDIVPVPR 79

The following BLAST results are available for this feature:

BLAST of Gvermi4351.t1 vs. uniprot

BLAST of Gvermi4351.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7Q7D3_CHOCR	2.540e-15	51.28	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020164	Cytochrome c oxidase assembly protein COX16	PFAM	PF14138	COX16	coord: 24..91 e-value: 1.9E-13 score: 50.6
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 41..91
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..40
None	No IPR available	TMHMM	TMhelix		coord: 21..43

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_147	contig	ScGOVlb_147:1334720..1335075 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi4351.t1	Gvermi4351.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_147 1334720..1335075 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi4351.t1 ID=Gvermi4351.t1|Name=Gvermi4351.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=92bp
MKRTPRSVVARLFARSDPRSHFFTFGLPFLTFMVAGHWALTYVTQGRYDV
RDEKERQQALMTSEGRVVIPEEALKVPPKPSQQYEMKPVPR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020164	Cyt_c_Oxase_assmbl_COX16