Gvermi8842.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8842.t1
Unique NameGvermi8842.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length491
Homology
BLAST of Gvermi8842.t1 vs. uniprot
Match: A0A2V3ITK3_9FLOR (Phycobilisome 27.9 kDa linker polypeptide, phycoerythrin-associated, rod n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITK3_9FLOR)

HSP 1 Score: 699 bits (1803), Expect = 1.400e-249
Identity = 359/492 (72.97%), Postives = 404/492 (82.11%), Query Frame = 0
Query:    1 MSAFVPG--LPLSSTRVFITGSNVQIDGRPFRQTENLACPQISAIKLPSXXXXXXXXXXXGFRKKAAKPASAPPKPKPVEKLKVGGVQVDRNVNPAPKRTTPVTKRDFPKKETSTLPKFYNPSTARYEFVADAKGQNATPFDIRVGRETNTTNRRVNEQGTFRNMDPYTDDLVWARPGWSSEEARVAVRAAIRQVFGNANLFESELAELAFPISCVTDTADMKEFVRALGLSEAYRKRFFESCSNTRFVELNFMHFLGRAPHNQAEVSQHIQIITQQGFNAEINSYIDSDEYDTLWGESRIPAVNFRGGHPYNNDMNKIAVLNGGYATTDRASTRAYLNRGDATGFNPYSIRKGLPEAWRGENDARASAGPLNSFSDKAFWNQQPNPLQEAELQWTSRYGKWNKFYYKDSIVYKEVMRPKLTHSDAELEEAAAILKYGSTVAKNYIGSRKIFDMAPIIELRPPTSQVAPNGLLSVTMKKISFPIPSDLKQPV 490
            MSAFVPG  L LSS RVF TGS   +  RP R  +  A  + SAIKLP XXXXXXXXXX   RKK A     P + KPV  LKVGG  V+ +     ++T    KR  PKK  S LPKFYNP TARYEF A+AKGQNAT FD+RVGRETNTTNRR+NEQGT RNMDPYTDDL+WARPGWSS+EARV VR AI++VFGNANLF+S+LAELA  ISCVT+TADMKEFVRALGLS AYRKRFFES SNTRF+ELNF+HFLGRAPH Q EVS HIQII  QG+NAEINSYIDSDEYDTLWGESRIPA+NFRGGHPYNNDMNKIAVLNGG+A+TDRAS++AYL  GDATGFNPYSIRKGLPEAW GEN ARA AGP+  F    FWN QPN L EAEL W +RYG WNKFYYKDS VYKE+M+PKL+HSD E+EEAAAILKYG+ +AKNY+GSRK FDMAP+IELRPPTS +A NG+LSV+M+KI+FP+PS+++Q V
Sbjct:    1 MSAFVPGPGLSLSSNRVFFTGSTATLSRRPTRVVQTPAITETSAIKLPXXXXXXXXXXXPFGRKKPASTTPPPTEQKPV--LKVGGKSVEASKPEETEKTA--VKRSLPKKTVSKLPKFYNPPTARYEFAANAKGQNATAFDVRVGRETNTTNRRINEQGTLRNMDPYTDDLLWARPGWSSDEARVGVRVAIKKVFGNANLFDSDLAELATSISCVTETADMKEFVRALGLSSAYRKRFFESTSNTRFIELNFLHFLGRAPHTQEEVSAHIQIINDQGYNAEINSYIDSDEYDTLWGESRIPAINFRGGHPYNNDMNKIAVLNGGFASTDRASSKAYLVSGDATGFNPYSIRKGLPEAWVGENSARAIAGPVGEFDSSKFWNPQPNALMEAELAWKARYGSWNKFYYKDSAVYKEIMKPKLSHSDQEMEEAAAILKYGTIMAKNYVGSRKTFDMAPVIELRPPTSAIAQNGVLSVSMQKITFPVPSEMQQAV 488          
BLAST of Gvermi8842.t1 vs. uniprot
Match: R7QP92_CHOCR (PBS-linker domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP92_CHOCR)

HSP 1 Score: 530 bits (1364), Expect = 1.050e-183
Identity = 283/447 (63.31%), Postives = 331/447 (74.05%), Query Frame = 0
Query:    1 MSAFVP--GLPLSSTRVFITGSNVQIDGRPFRQTENLACPQISAIKLPSXXXXXXXXXXXGFRKKAAKPASAPPKPKPVEKLKVGGVQVDRNVNPAPKRTTPVTKRDFPKKETST-LPKFYNPSTARYEFVADAKGQNATPFDIRVGRETNTTNRRVNEQGTFRNMDPYTDDLVWARPGWSSEEARVAVRAAIRQVFGNANLFESELAELAFPISCVTDTADMKEFVRALGLSEAYRKRFFESCSNTRFVELNFMHFLGRAPHNQAEVSQHIQIITQQGFNAEINSYIDSDEYDTLWGESRIPAVNFRGGHPYNNDMNKIAVLNGGYATTDRASTRAYLNRGDATGFNPYSIRKGLPEAWRGENDARASAGPLNSFSDKAFWNQQPNPLQEAELQWTSRYGKWNKFYYKDSIVYKEVMRPKLTHSDAELEEAAAILKYGSTVAKNYI 444
            M AFVP  GLPLSS+RVF+TG +  +  RP R+ E      ISAIKLP XXXXXXXXXXX        P ++        +L +GG  V      AP    P  K       T   +PKFYNP TAR EF ADAKG NAT +D+RVGRETNTTNRRVNEQGTFRNMDPYTDDL+WARPGWSS+EARV VR A+R V GNAN+FESELAELA  ISCVT+TA+MKEFVRA+GLS AYRKRFF++ SNTRFVE NF+HFLGRAPHNQ EVS+HI+IIT+QG+NAEINSY+DSDEYD L+GESRIPAVNFRGGHPYNNDMNKI  LNG Y +TDR    A L  GD  GF    I+KGLP AWRGEN AR  AGP+ SF    FW+  P  +++AE+ W ++YG W KF+YKDS +Y+E+M+PKL H+  E++EA AILKYGST+A  Y+
Sbjct:    1 MPAFVPAPGLPLSSSRVFVTGRSTPVASRPTRRAEAPVHTDISAIKLPXXXXXXXXXXXXXXXXXXXNPVAS--------ELTIGGRTVQ-----APAAAPPARKPXXXXXXTGKGIPKFYNPPTARAEFRADAKGHNATAYDVRVGRETNTTNRRVNEQGTFRNMDPYTDDLLWARPGWSSDEARVGVRVALRNVLGNANMFESELAELATSISCVTETANMKEFVRAVGLSNAYRKRFFDATSNTRFVECNFLHFLGRAPHNQEEVSEHIRIITEQGYNAEINSYMDSDEYDILFGESRIPAVNFRGGHPYNNDMNKICALNGTYTSTDRILATAVLPTGDYAGFKSVGIKKGLPTAWRGENAARDQAGPVMSFPAGVFWSPSPQGIRDAEIAWNAKYGNWTKFWYKDSQMYQEMMKPKLRHTAEEVKEAKAILKYGSTMASAYV 434          
BLAST of Gvermi8842.t1 vs. uniprot
Match: A0A1X6P2M1_PORUM (PBS-linker domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2M1_PORUM)

HSP 1 Score: 365 bits (938), Expect = 2.290e-118
Identity = 193/419 (46.06%), Postives = 276/419 (65.87%), Query Frame = 0
Query:   80 LKVGGVQVDRNVNPAPKRTTPVTKRDFPKKETSTLP---KFYNPSTARYEFVADAKGQNATPFDIRVGRE--TNTTNRRVNEQGTFRNMDPYTDDLVWARPGWSSEEARVAVRAAIRQVFGNANLFESELAELAFPISCVTDTADMKEFVRALGLSEAYRKRFFESCSNTRFVELNFMHFLGRAPHNQAEVSQHIQIITQQGFNAEINSYIDSDEYDTLWGESRIPAVNFRGGHPYNNDMNKIAVLNGGYATTDRASTRAYLNRG--DATGFNPYSIRKGLPEAWRGENDARASAGPLNSFSDKAFWNQQPNPLQEAELQWTSRYGKWNKFYYKDSIVYKEVMRPKLTHSDAELEEAAAILKYGSTVAKNYIG-SRKIFDMAPIIELRPPTSQVAPNGLLSVTMKKISFPIPSDLKQPV 490
            +KVGG Q      PA         +  PK     +P   KFYNP++ARY F   A GQ++TP+D+RV         N RVN+QGTFRNM+PYT D VW      S+E  +AVRA  + V GNA+L ESE AELA+  SC T T + KEFVRA+  S+AYR R+FE  +  RFVEL + + LGRAP +QAE +  + ++ Q+G+ A INS +DS EYD+L+GE+R+PAVNFRGGH  NN+MN++AVL+G  +++D++ + A +     +A+G    ++  GLP+AW+GEN AR +AG   S    AFW+  P  +Q    +WT++YGKW   YY DS+VY++VM+P+++ S+ E EEAAA+LKYGS +AK+Y G +RK++D AP++EL+ P +     G + V+++ ++  IPS+L Q V
Sbjct:   87 VKVGGKQAPAG-RPAEVSVGGTPVKRAPKGAQKGIPINVKFYNPASARYHFARAAAGQSSTPYDVRVSTVGFKKHANERVNDQGTFRNMNPYTWDTVWTHGDMDSDEKAIAVRAVYKNVLGNAHLMESERAELAYSESCFTYTGNAKEFVRAVAQSDAYRTRYFEPVTPMRFVELTYKNILGRAPRSQAEYAGTMAVLQQEGYKAAINSLVDSAEYDSLFGETRVPAVNFRGGHETNNEMNRLAVLSGSASSSDKSKSTAAVFPAIDEASGVTAATVEAGLPDAWKGENAARENAGLARSLPRDAFWSGAP--MQAESKEWTAKYGKWFPNYYADSVVYRDVMKPRISVSEEEAEEAAAVLKYGSLMAKSYTGGARKVWDKAPMVELKTPKN--GQGGYVRVSLETVTGSIPSNLSQKV 500          
BLAST of Gvermi8842.t1 vs. uniprot
Match: A0A7S1TLC8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLC8_9RHOD)

HSP 1 Score: 322 bits (826), Expect = 1.710e-101
Identity = 178/393 (45.29%), Postives = 242/393 (61.58%), Query Frame = 0
Query:  103 KRDFPKKETSTLPKFYNPSTARYEFVADAKGQNATPFDIRVGRE--TNTTNRRVNEQGTFRNMDPYTDDLVWARPGWSSEEARVAVR-AAIRQVFGNANLFESELAELAFPISCVTDTADMKEFVRALGLSEAYRKRFFESCSNTRFVELNFMHFLGRAPHNQAEVSQHIQIIT-QQGFNAEINSYIDSDEYDTLWGESRIPAVNFRGGHPYNNDMNKIAVLNGGYATTDRASTRAY---LNRGDATGFNPYSIRKGLPEAWRGENDARASAGPLNSFSDKAFWNQQPNPLQEAELQWTSRYGKWNKFYYKDSIVYKEVMRPKLTHSDAELEEAAAILKYGSTVAKNYIGSRKIFDMAPIIELRPPTSQVAPNGLLSVTMKKISFPIPSDLKQ 488
            K++  K      P+ Y P    YE    A GQ  T FD R+G +      N RVN+ GTFRNMD YT +L WAR     ++ R AV  AA +QVFGNA L E EL++L+   S    + ++KE VR+L LSE+Y+ RFF+S S  RFVELNF H LGR P +QAE S+HIQ++    G+  EINSY+DS EYD+L+G +R+P +NF+GGH  +N+MN++A+LNG  +  D   + A    +    ATG +  S+++GLP  WRGEN AR +AG        +  + +   L+  E+ W  RYG WN  YY  S+ Y+EVM PKL   DA+ +EAAA+LKYGS +AK+YIG RKIFD AP+I+L  P       G L + + KI   +P++L Q
Sbjct:  122 KKNLMKTPDLKAPEIYTPDNRNYEVRRAAAGQGGTAFDRRIGVDGLRKLNNDRVNDIGTFRNMDEYTAELFWAR-----KDNRAAVADAAFKQVFGNAYLLEEELSQLSTARSAFLISGNVKELVRSLALSESYKSRFFDSMSTMRFVELNFKHLLGRGPRSQAEYSKHIQLVNGPNGYIEEINSYLDSPEYDSLYGTTRVPQINFKGGHETDNEMNRLAILNGSPSNADVTRSNALFPAIGDASATGVSGRSVQRGLPPKWRGENAAREAAGLSFQVPGMSTVSAE---LKRDEIAWKQRYGVWNTPYYSRSLPYREVMTPKLRVDDADAKEAAAVLKYGSLMAKSYIGDRKIFDKAPVIQLTAPVD--GSGGSLRLALSKIEPAVPANLVQ 504          
BLAST of Gvermi8842.t1 vs. uniprot
Match: A0A7S0ZFW3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFW3_9RHOD)

HSP 1 Score: 311 bits (798), Expect = 2.260e-99
Identity = 167/360 (46.39%), Postives = 234/360 (65.00%), Query Frame = 0
Query:  134 QNATPFDIRVGRE--TNTTNRRVNEQGTFRNMDPYTDDLVWARPGWSSEEARVAVRAAIRQVFGNANLFESELAELAFPISCVTDTADMKEFVRALGLSEAYRKRFFESCSNTRFVELNFMHFLGRAPHNQAEVSQHIQIITQQGFNAEINSYIDSDEYDTLWGESRIPAVNFRGGHPYNNDMNKIAVLNGGYATTDRAS-TRAYLNRGDATGFNPYSIRKGLPEAWRGENDARASAGPLNSFSDKAFWNQQPNPLQEAELQWTSRYGKWNKFYYKDSIVYKEVMRPKLTHSDAELEEAAAILKYGSTVAKNYIGSRKIFDMAPIIELRPPTSQVAPNGLLSVTMKKISFPIPSDLKQPV 490
            Q AT FD R+G +      N RVN+  TFRNMD YT++L WAR     +  +  V    +QVFGNA LFES+L   +   S    T ++KEF+R+L LS+ Y+ +FFE+ +  RFVELNF HFLGRAP +QAE S+HIQ++  +G+ AEINSY+DS EYD+L+G +R+P +NF+GGH  +N+MN++AVL G  + +D    T A+     ++G +   + +GLP AWRGEN AR  AG +         N Q   L++ E+ W  RYG WN FYYK S+ YK++M P+L ++DAE+++AAA LKYG+ ++K Y+GSRKIFD AP+IEL  P       G + V MK ++   P++L Q V
Sbjct:    1 QGATAFDRRIGVDGLRKLNNDRVNDIQTFRNMDEYTNELAWAR----KDNRKSIVPVIYKQVFGNAYLFESDLECFSTAESTFLVTGNVKEFIRSLALSDTYKSKFFETGTAMRFVELNFKHFLGRAPRSQAEFSEHIQLLANEGYVAEINSYLDSAEYDSLYGTTRVPQINFKGGHETDNEMNRLAVLAGPPSGSDVTQRTPAFPAIDASSGISSGLVYRGLPAAWRGENKARERAGLIFFLPGMESGNDQ---LKKDEVSWKLRYGNWNTFYYKMSLPYKQIMTPQLKNTDAEVQQAAADLKYGTLMSKMYVGSRKIFDQAPVIELSAPVDGA--GGSVRVAMKTMAPSTPANLLQEV 351          
BLAST of Gvermi8842.t1 vs. uniprot
Match: A0A5J4YT21_PORPP (Phycobilisome 31.8 kDa linker polypeptide, phycoerythrin-associated, rod n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT21_PORPP)

HSP 1 Score: 290 bits (741), Expect = 1.070e-89
Identity = 156/326 (47.85%), Postives = 211/326 (64.72%), Query Frame = 0
Query:  125 YEFVADAKGQNATPFDIRVGRET--NTTNRRVNEQGTFRNMDPYTDDLVWARPGWSSEEARVAVRAAIRQVFGNANLFESELAELAFPISCVTDTADMKEFVRALGLSEAYRKRFFESCSNTRFVELNFMHFLGRAPHNQAEVSQHIQIITQQGFNAEINSYIDSDEYDTLWGESRIPAVNFRGGHPYNNDMNKIAVLNGGYATTD----RASTRAYLNRGDATGFNPYSIRKGLPEAWRGENDARASAGPLNSFSDKAFWNQQPNPLQEAELQWTSRYGKWNKFYYKDSIVYKEVMRPKLTHSDAELEEAAAILKYGSTVAKNYI 444
            Y F  + + Q  T FD R G +      N RVN+ GTFRNMD YTD+LVW     + E   V V+A  +QVFGNA LFES+LA L  P S      D+KEFVRALG S  Y+ +FF+  +  RFVELNF HFLGRAP +QAE S HIQ++  +G  AEINSY+DS E+D+L+G +R+PA+NF+GGH  + +MN++A+LNG  +  D    +A   A++     TG + +S+  GLP AWRGEN ARA+AG   SF      +     +++ EL W  + GKW  FYYKDS+ Y+++++P L +SD E + A AILKYGS +AK+Y+
Sbjct:  119 YTFQRNTRMQGTTQFDRRFGVDGLHKLNNDRVNDIGTFRNMDEYTDELVWTN---NDESRAVTVKAVYKQVFGNAYLFESDLAALKGPESAFVKHGDVKEFVRALGCSSVYKSKFFDKMTTMRFVELNFKHFLGRAPRSQAEWSTHIQLVNNKGIVAEINSYLDSPEFDSLFGTTRVPAINFKGGHETDMEMNRLAILNGTPSDADVTRKKARFPAFVG---TTGVDAFSVEIGLPPAWRGENRARAAAGL--SFKVPGMRDNSELIVRD-ELAWKMKMGKWATFYYKDSLPYQQIIKPNLVNSDEEKKMANAILKYGSLMAKSYV 435          
BLAST of Gvermi8842.t1 vs. uniprot
Match: A0A291FEB7_GRIPA (LRC2 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEB7_GRIPA)

HSP 1 Score: 149 bits (375), Expect = 6.280e-36
Identity = 79/161 (49.07%), Postives = 103/161 (63.98%), Query Frame = 0
Query:  178 SSEEARVAVRAAIRQVFGNANLFESELAELAFPISCVT-DTADMKEFVRALGLSEAYRKRFFESCSNTRFVELNFMHFLGRAPHNQAEVSQHIQIITQQGFNAEINSYIDSDEYDTLWGESRIPAVNFRGGHPYNNDMNKIAVLNGGYATTDRASTRAYLN 337
            S  E  +A+RAA R VFGNA + E ELAE+    S         KEF+RAL  S AY+ RFFE  S  RFVELNFMH LGRAP  Q EV+ H+ I   +GF+AEI+SYIDS+EYD+++G+  +P + FRG +   +  NK   L GG+A +D+A   A L+
Sbjct:   81 SEYEREIAIRAAYRHVFGNAYIMEEELAEVEVTASQYKLGNLTAKEFIRALAKSSAYKTRFFEGASQYRFVELNFMHLLGRAPDTQEEVATHMNIYHAKGFDAEIDSYIDSEEYDSVFGDYNVPFLRFRGAYTPCDSFNKQCALKGGWANSDKAMGGAALS 241          
BLAST of Gvermi8842.t1 vs. uniprot
Match: A0A2V3ICK5_9FLOR (Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICK5_9FLOR)

HSP 1 Score: 147 bits (370), Expect = 3.930e-35
Identity = 89/224 (39.73%), Postives = 118/224 (52.68%), Query Frame = 0
Query:  175 PGWSSEEARVAVRAAIRQVFGNANLFESELAELAFPISCV-TDTADMKEFVRALGLSEAYRKRFFESCSNTRFVELNFMHFLGRAPHNQAEVSQHIQIITQQGFNAEINSYIDSDEYDTLWGESRIPAVNFRGGHPYNNDMNKIAVLNGGYATTDRASTRAYL---NRGDATGF----NPYSIRKGLPEAWRGENDARASAGPLNSFSDKAFWNQQPNPLQEAE 390
            PG S  +  + +RAA R +FGNA L E E AELA P S         +EFVR L  S AY+KRF +  S  RF+ELNFMH LGRAP  + ++S+H+ I   QG +A+I+SYIDS+EY +++G+  IP + FRG +      NK   L GG+A +D+A   A L   N  D   F    + Y   +  P     EN    S  P         W   PNP  E +
Sbjct:   75 PGSSEGDREIHLRAAYRHIFGNAYLMEEERAELAVPESQYKAGNISAREFVRCLAKSSAYKKRFLDGASQFRFIELNFMHLLGRAPDTRKDISEHLAIYATQGVDADIDSYIDSEEYSSVFGDDTIPFLRFRGAYTPCESFNKQCALKGGWANSDKAMGGAALSGYNGADGKQFCQNISSYISAEPTPYEQVAENTPLKSTAPN--------WYACPNPAVEPQ 290          
BLAST of Gvermi8842.t1 vs. uniprot
Match: A0A1X6NKA8_PORUM (PBS-linker domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKA8_PORUM)

HSP 1 Score: 142 bits (358), Expect = 9.670e-34
Identity = 85/212 (40.09%), Postives = 122/212 (57.55%), Query Frame = 0
Query:  180 EEARVAVRAAIRQVFGNANLFESELAELA-----FPISCVTDTADMKEFVRALGLSEAYRKRFFESCSNTRFVELNFMHFLGRAPHNQAEVSQHIQIITQQGFNAEINSYIDSDEYDTLWGESRIPAVNFRGGHPYNNDMNKIAVLNGGYATTDRASTRAYLNRGDATGFNPYSIRKGLPEAWRGEN-DARASAGPLNSFSDKAFWNQQPNP 385
            EE   A+RA  RQVFGNA + E E AELA     F +  +T    +KE +RA+  S  YR RFFE  S  RF+ELNF H +GR+P +QAE+S+H+Q  +  G+ AEI+SY+DS EY T++G++ +P + FRG +   +  NK   L GG+A +D+A   A L+  + +  +  S       A +  N +A A   PL S +    W   P+P
Sbjct:   37 EERENALRATYRQVFGNAYIMEEERAELAIAESQFKLGALT----VKELIRAMAKSSTYRARFFEGASQYRFIELNFKHLMGRSPDSQAEISEHVQRYSAAGYEAEIDSYLDSAEYTTVFGDNTVPFLRFRGAYTPCDSFNKQCALQGGWANSDKAMGGAALSGWNGSDGHQESTLIASYAAGKPVNYEAVAENTPLKSTAPN--WYAVPDP 242          
BLAST of Gvermi8842.t1 vs. uniprot
Match: A0A5J4Z323_PORPP (Phycobilisome 27.9 kDa linker polypeptide, phycoerythrin-associated, rod n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z323_PORPP)

HSP 1 Score: 137 bits (346), Expect = 3.450e-33
Identity = 83/228 (36.40%), Postives = 127/228 (55.70%), Query Frame = 0
Query:  160 FRNMD-PYTDDLVWARPGWSSEEARVAVRAAIRQVFGNANLFESELAELAFPIS-CVTDTADMKEFVRALGLSEAYRKRFFESCSNTRFVELNFMHFLGRAPHNQAEVSQHIQIITQQGFNAEINSYIDSDEYDTLWGESRIPAVNFRGGHPYNNDMNKIAVL----NGGYATTDRAST------RAYLNRGDATGFNPYSIRKGLPE----AWRGENDARASAGPLN 371
            F ++D P    ++W   G   +E     +   RQVFGNA L ES+L EL  P S  +  +  +K+F++ +  S+AY+KRFFE C   RFVEL   HFLGR P +Q EVS+H+Q +  +G++A+++SY+DS+EY +L+GE+ +P   F+G +  N+  N++A +    +G Y  T   ST      +A L   +        + +GLP     A  G    RA  GP+N
Sbjct:   45 FSSLDEPERQVVMWESVG---DEKDQVFKQLYRQVFGNAYLMESDLEELLVPESQLLMGSISVKDFIKRVAKSDAYKKRFFEPCGPYRFVELCTKHFLGRGPRDQKEVSEHVQRLANEGYDADVDSYMDSEEYMSLFGENGVPRFVFKGTYEGNDQFNRLAAMRQFADGSYTDTRSGSTAPRKAQKAELTMAEGDFVGRAKVSRGLPAETSAAKTGTPPVRALKGPVN 269          
The following BLAST results are available for this feature:
BLAST of Gvermi8842.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITK3_9FLOR1.400e-24972.97Phycobilisome 27.9 kDa linker polypeptide, phycoer... [more]
R7QP92_CHOCR1.050e-18363.31PBS-linker domain-containing protein n=1 Tax=Chond... [more]
A0A1X6P2M1_PORUM2.290e-11846.06PBS-linker domain-containing protein n=1 Tax=Porph... [more]
A0A7S1TLC8_9RHOD1.710e-10145.29Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S0ZFW3_9RHOD2.260e-9946.39Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YT21_PORPP1.070e-8947.85Phycobilisome 31.8 kDa linker polypeptide, phycoer... [more]
A0A291FEB7_GRIPA6.280e-3649.07LRC2 n=1 Tax=Griffithsia pacifica TaxID=35689 RepI... [more]
A0A2V3ICK5_9FLOR3.930e-3539.73Phycobilisome 32.1 kDa linker polypeptide, phycocy... [more]
A0A1X6NKA8_PORUM9.670e-3440.09PBS-linker domain-containing protein n=1 Tax=Porph... [more]
A0A5J4Z323_PORPP3.450e-3336.40Phycobilisome 27.9 kDa linker polypeptide, phycoer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038255Phycobilisome linker domain superfamilyGENE3D1.10.3130.20Phycobilisome linker domaincoord: 170..309
e-value: 5.3E-37
score: 128.6
IPR001297Phycobilisome linker domainPFAMPF00427PBS_linker_polycoord: 178..301
e-value: 1.2E-35
score: 122.2
IPR001297Phycobilisome linker domainPROSITEPS51445PBS_LINKERcoord: 148..329
score: 23.624754
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..74
NoneNo IPR availablePANTHERPTHR34011:SF5PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2coord: 169..333
NoneNo IPR availablePANTHERPTHR34011PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2-RELATEDcoord: 169..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2241contigScGOVlb_2241:246578..248050 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8842.t1Gvermi8842.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2241 246578..248050 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8842.t1 ID=Gvermi8842.t1|Name=Gvermi8842.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=491bp
MSAFVPGLPLSSTRVFITGSNVQIDGRPFRQTENLACPQISAIKLPSLPK
LPSLPSLPGFRKKAAKPASAPPKPKPVEKLKVGGVQVDRNVNPAPKRTTP
VTKRDFPKKETSTLPKFYNPSTARYEFVADAKGQNATPFDIRVGRETNTT
NRRVNEQGTFRNMDPYTDDLVWARPGWSSEEARVAVRAAIRQVFGNANLF
ESELAELAFPISCVTDTADMKEFVRALGLSEAYRKRFFESCSNTRFVELN
FMHFLGRAPHNQAEVSQHIQIITQQGFNAEINSYIDSDEYDTLWGESRIP
AVNFRGGHPYNNDMNKIAVLNGGYATTDRASTRAYLNRGDATGFNPYSIR
KGLPEAWRGENDARASAGPLNSFSDKAFWNQQPNPLQEAELQWTSRYGKW
NKFYYKDSIVYKEVMRPKLTHSDAELEEAAAILKYGSTVAKNYIGSRKIF
DMAPIIELRPPTSQVAPNGLLSVTMKKISFPIPSDLKQPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038255PBS_linker_sf
IPR001297PBS_linker_dom