Gvermi4208.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi4208.t1
Unique Name	Gvermi4208.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	159

Homology

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BLAST of Gvermi4208.t1 vs. uniprot
Match: A0A2V3J1I9_9FLOR (Cytochrome b5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1I9_9FLOR)

HSP 1 Score: 254 bits (648), Expect = 1.500e-84
Identity = 121/158 (76.58%), Postives = 140/158 (88.61%), Query Frame = 0

Query:    1 MRSTEDLPAYSSIEVAKHASPNDAWLIVGGKVLDVTSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDAELRISRSLGGGSGKPAGSAYENAEVLRAWLNEKTQTLRQVGMIGAISAGIIVSAIIIRRYAVGWTSQGNR 158
            MRSTEDLPAYSSIEVAKH+SP DAWLIVGGKVLDVTSWLSEHPGG+DVLLDLAGRDATREFEDVGHSSDARS+LDHLV+GTLRPATD ELRISR+ G G  K  G  ++NAEVLR W++EK  + R+VG IGA+SA +++SA+II+RY +GWT+QG R
Sbjct:    1 MRSTEDLPAYSSIEVAKHSSPEDAWLIVGGKVLDVTSWLSEHPGGEDVLLDLAGRDATREFEDVGHSSDARSQLDHLVVGTLRPATDEELRISRNTGTGPKKEGGMGFDNAEVLREWIHEKVSSFRRVGTIGAVSAAVLISAVIIKRYGMGWTAQGRR 158

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BLAST of Gvermi4208.t1 vs. uniprot
Match: R7QKT8_CHOCR (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKT8_CHOCR)

HSP 1 Score: 169 bits (429), Expect = 3.010e-51
Identity = 83/146 (56.85%), Postives = 112/146 (76.71%), Query Frame = 0

Query:    5 EDLPAYSSIEVAKHASPNDAWLIVGGKVLDVTSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDAELRISRSLGGGS--GKPAGSAYENAEVLRAWLNEKTQTLRQVGMIGAISAGIIVSAIIIRRY 148
            +D PA++++EVAKH+S  DAWLI+GG+VL+++SWL +HPGGD VLLDLAGRDATREF+DVGHS DAR+RLD LVIG +R ATD ELRI+RS G  +  GK  G A   A++  +W  E    L++ GM GA +A ++V+A+ ++RY
Sbjct:    2 DDPPAFTTLEVAKHSSAADAWLIIGGRVLNISSWLHDHPGGDVVLLDLAGRDATREFDDVGHSGDARARLDGLVIGEVRAATDDELRIARSGGAAARGGKGGGIAARGADLAASWARENGDALKRAGMWGAAAAAVVVAAVAVQRY 147

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BLAST of Gvermi4208.t1 vs. uniprot
Match: A0A2V3IPU2_9FLOR (Cytochrome B5 isoform D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPU2_9FLOR)

HSP 1 Score: 108 bits (271), Expect = 1.320e-27
Identity = 50/85 (58.82%), Postives = 64/85 (75.29%), Query Frame = 0

Query:    9 AYSSIEVAKHASPNDAWLIVGGKVLDVTSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDAELRIS 93
            AY  +EVA+H S +  W+++   V DVTS+L EHPGGDD+LLD +GRDATREFEDVGHSSDAR++L  L IG LR  T  E+ ++
Sbjct:    6 AYPMVEVARHTSSSSCWMVIDSNVYDVTSFLLEHPGGDDILLDSSGRDATREFEDVGHSSDARAQLAELQIGELRDPTPEEVALA 90

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BLAST of Gvermi4208.t1 vs. uniprot
Match: R7QCY4_CHOCR (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCY4_CHOCR)

HSP 1 Score: 108 bits (271), Expect = 1.400e-27
Identity = 51/110 (46.36%), Postives = 75/110 (68.18%), Query Frame = 0

Query:    6 DLPAYSSIEVAKHASPNDAWLIVGGKVLDVTSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDAELRISRSLGGGSGKPAGSAYENAEVLR 115
            D+  Y  IEVA+H++ +  WL++ GKV D T +L EHPGGDD++++ +GRDATREFEDVGHS +AR++L+ L+IGTLR  T  E   +      SG+   +A   + +L+
Sbjct:    3 DMKEYPMIEVARHSTADSCWLVIDGKVYDTTDFLLEHPGGDDIVVESSGRDATREFEDVGHSGEARAQLEDLLIGTLRDPTPEETERAEDEARKSGEKPAAADAGSAMLK 112

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BLAST of Gvermi4208.t1 vs. uniprot
Match: A0A7S0G445_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G445_9RHOD)

HSP 1 Score: 107 bits (268), Expect = 4.840e-27
Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 0

Query:   10 YSSIEVAKHASPNDAWLIVGGKVLDVTSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDAE 89
            YS +EVAKH    D W+++ GKV DVTS+L +HPGG+D+L++ +GRDATREFEDVGHS+DAR  L  L++GTLR  T+ E
Sbjct:    7 YSLLEVAKHDKRKDCWMVIHGKVYDVTSFLLDHPGGEDILVETSGRDATREFEDVGHSNDARGALKDLLLGTLREPTEEE 86

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BLAST of Gvermi4208.t1 vs. uniprot
Match: A0A5J4Z7Y1_PORPP (Cytochrome B5 isoform D n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7Y1_PORPP)

HSP 1 Score: 105 bits (261), Expect = 6.140e-26
Identity = 48/84 (57.14%), Postives = 61/84 (72.62%), Query Frame = 0

Query:    6 DLPAYSSIEVAKHASPNDAWLIVGGKVLDVTSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDAE 89
            D+  +S +EV +HAS  D W+++ GKV DVTS+L +HPGGDD+LL   GRDA REFEDVGHS DAR +L+ L +G LR  T  E
Sbjct:   15 DMKEFSMLEVLEHASRQDFWMVIDGKVYDVTSFLLDHPGGDDLLLQTLGRDAHREFEDVGHSGDARQKLEELFVGKLRDPTPEE 98

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BLAST of Gvermi4208.t1 vs. uniprot
Match: M2Y577_GALSU (Cytochrome b5 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y577_GALSU)

HSP 1 Score: 102 bits (254), Expect = 4.470e-25
Identity = 45/86 (52.33%), Postives = 63/86 (73.26%), Query Frame = 0

Query:    5 EDLPAYSSIEVAKHASPNDAWLIVGGKVLDVTSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDAEL 90
            + L  +  +EVAKH +  DAW+++ GK+ DVT +L EHPGG++VLL++AGRDATREFEDVGHS +AR   +  ++G +R  T  EL
Sbjct:    2 DHLKQHPLVEVAKHNTKKDAWIVIDGKIYDVTQFLDEHPGGEEVLLEVAGRDATREFEDVGHSDEARELREKYLVGVVRKETKEEL 87

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BLAST of Gvermi4208.t1 vs. uniprot
Match: A0A060T208_BLAAD (ARAD1C28248p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T208_BLAAD)

HSP 1 Score: 102 bits (253), Expect = 6.320e-25
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0

Query:    1 MRSTEDLPAYSSIEVAKHASPNDAWLIVGGKVLDVTSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDAELRISRSLGG 98
            M  T++   Y++ EVAKH   +D WL+V GKV DVT ++ EHPGG++VL+D+ G+DAT EFEDVGHS DA   L  L+IG+  PA  A        GG
Sbjct:    1 MSETQESKVYTAAEVAKHTDRDDLWLVVRGKVYDVTKFVDEHPGGEEVLVDVGGKDATSEFEDVGHSEDAEEILKGLLIGSTDPAEFAHKEAPARSGG 98

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BLAST of Gvermi4208.t1 vs. uniprot
Match: A0A1X6P530_PORUM (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P530_PORUM)

HSP 1 Score: 102 bits (255), Expect = 1.760e-24
Identity = 46/77 (59.74%), Postives = 59/77 (76.62%), Query Frame = 0

Query:   10 YSSIEVAKHASPNDAWLIVGGKVLDVTSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPAT 86
            +   EVAKHAS  D WL++ G V DVTS+L+EHPGG+DV+LD+AG+DAT EFEDVGHS DA  +L HL +G++   T
Sbjct:   14 FDMAEVAKHASSRDCWLVISGGVYDVTSYLAEHPGGEDVMLDMAGKDATNEFEDVGHSPDAVEQLRHLRVGSVLATT 90

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BLAST of Gvermi4208.t1 vs. uniprot
Match: A0A1X6NSS8_PORUM (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSS8_PORUM)

HSP 1 Score: 99.4 bits (246), Expect = 4.220e-24
Identity = 46/107 (42.99%), Postives = 69/107 (64.49%), Query Frame = 0

Query:    1 MRSTEDLPAYSSIEVAKHASPNDAWLIVGGKVLDVTSWLSEHPGGDDVLLDLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDAELRISRSLGGGSGKPAGSA 107
            M ++  +    + E+A H S + AW+++ GKV D+T++L +HPGGD++LLD   RDAT+EFEDVGHS +AR++L  +VIG  RP T  E  ++      +G    SA
Sbjct:    1 MTTSPPMREIPTTELADHTSRSSAWMLIDGKVHDITAFLDDHPGGDEILLDATARDATQEFEDVGHSGEARAQLAEMVIGVARPPTAEEAAVAAEKAAAAGVRMASA 107

The following BLAST results are available for this feature:

BLAST of Gvermi4208.t1 vs. uniprot

BLAST of Gvermi4208.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3J1I9_9FLOR	1.500e-84	76.58	Cytochrome b5 n=1 Tax=Gracilariopsis chorda TaxID=...	[more]
R7QKT8_CHOCR	3.010e-51	56.85	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A2V3IPU2_9FLOR	1.320e-27	58.82	Cytochrome B5 isoform D n=1 Tax=Gracilariopsis cho...	[more]
R7QCY4_CHOCR	1.400e-27	46.36	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A7S0G445_9RHOD	4.840e-27	60.00	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A5J4Z7Y1_PORPP	6.140e-26	57.14	Cytochrome B5 isoform D n=1 Tax=Porphyridium purpu...	[more]
M2Y577_GALSU	4.470e-25	52.33	Cytochrome b5 n=1 Tax=Galdieria sulphuraria TaxID=...	[more]
A0A060T208_BLAAD	6.320e-25	50.00	ARAD1C28248p n=1 Tax=Blastobotrys adeninivorans Ta...	[more]
A0A1X6P530_PORUM	1.760e-24	59.74	Cytochrome b5 heme-binding domain-containing prote...	[more]
A0A1X6NSS8_PORUM	4.220e-24	42.99	Cytochrome b5 heme-binding domain-containing prote...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001199	Cytochrome b5-like heme/steroid binding domain	PRINTS	PR00363	CYTOCHROMEB5	coord: 57..64 score: 50.38 coord: 70..82 score: 36.83 coord: 42..56 score: 57.17 coord: 32..42 score: 45.18
IPR001199	Cytochrome b5-like heme/steroid binding domain	SMART	SM01117	Cyt_b5_2	coord: 10..83 e-value: 1.9E-26 score: 103.8
IPR001199	Cytochrome b5-like heme/steroid binding domain	PFAM	PF00173	Cyt-b5	coord: 14..82 e-value: 1.0E-21 score: 76.8
IPR001199	Cytochrome b5-like heme/steroid binding domain	PROSITE	PS50255	CYTOCHROME_B5_2	coord: 7..83 score: 25.678541
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	GENE3D	3.10.120.10		coord: 3..87 e-value: 8.4E-29 score: 101.4
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	SUPERFAMILY	55856	Cytochrome b5-like heme/steroid binding domain	coord: 3..85
None	No IPR available	PANTHER	PTHR19359	CYTOCHROME B5	coord: 4..92
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 150..158
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..127
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 128..149
None	No IPR available	TMHMM	TMhelix		coord: 128..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_147	contig	ScGOVlb_147:743804..744405 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi4208.t1	Gvermi4208.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_147 743804..744405 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi4208.t1 ID=Gvermi4208.t1|Name=Gvermi4208.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=159bp
MRSTEDLPAYSSIEVAKHASPNDAWLIVGGKVLDVTSWLSEHPGGDDVLL
DLAGRDATREFEDVGHSSDARSRLDHLVIGTLRPATDAELRISRSLGGGS
GKPAGSAYENAEVLRAWLNEKTQTLRQVGMIGAISAGIIVSAIIIRRYAV
GWTSQGNR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001199	Cyt_B5-like_heme/steroid-bd
IPR036400	Cyt_B5-like_heme/steroid_sf