Gvermi5834.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5834.t1
Unique NameGvermi5834.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length463
Homology
BLAST of Gvermi5834.t1 vs. uniprot
Match: A0A2V3IFC3_9FLOR (Protein CLP1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFC3_9FLOR)

HSP 1 Score: 729 bits (1881), Expect = 7.950e-263
Identity = 370/432 (85.65%), Postives = 398/432 (92.13%), Query Frame = 0
Query:   31 MALDQSEQPNDYEPRMFTLPSEHELRFEIPPDVATASLSLQSGSAELFGLALAQNKPYHLPSALNAAAFTWHGAQLALRAPPHVMAYTATDTPMPSYINAHSVLQSKRVIARRAGIPGPRAIVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATIALSLVSHLDLEAGNLVHERVATLMVGHHSPRFNVPVSENVFNKLGAMVDKMLSMSHLNPWVGVLADTSGDILAKDGTDGVIQAIRAIKADVVFVLGAERLYAAIKSTFESTPTEAVLLAKSGGVVSRDEETRQSLRSAAIKAYFYGADNRLSPFSTALEFDKVTVLRIGGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDVFDKPLYGFLHVVKVDVERNTMTVLAPSPGNVPGDILLAGDTTWVE 462
            MAL+ +   +D+  R F+L SEHELRFEIPPDVA+ASL+L +GSAELFGLALAQNKPYHL  +LNAAAFTWHGA LALRAP +VMAYTATDTPMPSYINAHS+LQSKR +ARRAGIPGPRA+VVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATIALSLVSHLDLEAGNLVHER+ATLMVGHHSPR NVPVSE  FNKL A++DK++ MS+L+PWVG LADTSGDILAKDGTDGVIQAIRA+ ADVVFVLGAERLYAAIKSTFESTP EAVLLAKSGGV+SRD  TRQ LRS AIK+YFYGADNRLSPFS A+EFDKV VLR+GGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDVFD PL+GFLHVVKVDVERN+MTVLAPSPG +P  ILL GDT WVE
Sbjct:    1 MALEDAVDASDHPAREFSLQSEHELRFEIPPDVASASLTLLTGSAELFGLALAQNKPYHLAPSLNAAAFTWHGATLALRAPKYVMAYTATDTPMPSYINAHSILQSKRQVARRAGIPGPRAVVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATIALSLVSHLDLEAGNLVHERLATLMVGHHSPRHNVPVSERAFNKLAALLDKVMGMSNLDPWVGALADTSGDILAKDGTDGVIQAIRAMNADVVFVLGAERLYAAIKSTFESTPVEAVLLAKSGGVISRDAATRQVLRSNAIKSYFYGADNRLSPFSIAIEFDKVIVLRVGGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDVFDMPLFGFLHVVKVDVERNSMTVLAPSPGTIPSTILLVGDTKWVE 432          
BLAST of Gvermi5834.t1 vs. uniprot
Match: R7QJX8_CHOCR (Pre-mRNA cleavage complex II protein Clp1, putative n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJX8_CHOCR)

HSP 1 Score: 517 bits (1331), Expect = 4.230e-179
Identity = 254/420 (60.48%), Postives = 324/420 (77.14%), Query Frame = 0
Query:   44 PRMFTLPSEHELRFEIPPDVAT-ASLSLQSGSAELFGLALAQNKPYHLPSALNAAAFTWHGAQLALRAPPHVMAYTATDTPMPSYINAHSVLQSKRVIARRAGIPGPRAIVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATIALSLVSHLDLEAGNLVHERVATLMVGHHSPRFNVPVSENVFNKLGAMVDKMLSMSHLNPWVGVLADTSGDILAKDGTDGVIQAIRAIKADVVFVLGAERLYAAIKSTFESTPTEAVLLAKSGGVVSRDEETRQSLRSAAIKAYFYGADNRLSPFSTALEFDKVTVLRIGGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDVFDKPLYGFLHVVKVDVERNTMTVLAPSPGNVPGDILLAGDTTWVE 462
            PR FTLP+EHELRFEIP D A+  +L+L+ GSAE+FG+ LA N+PY LP  LNAAAFTW GA L+L AP +VMAYTA DTPMP YI+AHS+LQS+R +A  AGIPGPR +VVGP DCGKT LV +LA YCV+ N + +V D+DPS  GA G +P  ++LS+V HLDLE+G LVH++  ++MVGH SPR N  VS  +F+ +G ++D+ LS   ++P  G + DTSGDI   DG   VI A++A+KADVVFVLGAERLYA++ + FE +  E VLL+KSGGVVS D+ +R ++RS  IK YFYGADNRLSPFST L F ++TVL++GG   VVPDSVLP GA SSLDPLKP RIT++++ LH VL VSQA+ E+ V   P+YG++HVVK+D +RNT+TVLAPSPG +P + LL+GDT W+E
Sbjct:   19 PRKFTLPAEHELRFEIPFDNASDINLTLEHGSAEVFGIELALNRPYTLPPGLNAAAFTWLGATLSLAAPSNVMAYTAGDTPMPHYISAHSILQSRRNLAMSAGIPGPRVMVVGPRDCGKTTLVKLLATYCVKVNTSVIVVDLDPSGCGAAGVVPGAVSLSVVKHLDLESGGLVHDKRTSVMVGHVSPRQNSLVSGKIFDTMGQILDRFLSKRDMSPSAGCIIDTSGDIDGPDGPSCVISAVKAVKADVVFVLGAERLYASVNTEFEDSTIETVLLSKSGGVVSHDDSSRMAMRSRQIKHYFYGADNRLSPFSTVLNFSEITVLKVGGVVAVVPDSVLPIGAQSSLDPLKPSRITTLSETLHKVLGVSQASKEEQVLTSPVYGYVHVVKIDSDRNTLTVLAPSPGRIPSNFLLSGDTKWIE 438          
BLAST of Gvermi5834.t1 vs. uniprot
Match: A0A5J4YSA3_PORPP (Protein CLP1 homolog n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSA3_PORPP)

HSP 1 Score: 293 bits (751), Expect = 8.950e-92
Identity = 181/419 (43.20%), Postives = 247/419 (58.95%), Query Frame = 0
Query:   47 FTLPSEHELRFEIPPDVATASLSLQ--SGSAELFGLALAQNKPYHLPSALNAAAFTWHGAQLALRAPPHVMAYTATDTPMPSYINAHSVLQSKRVIARRAGIPGPRAIVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATIALSLVSHLDLEAGNLVHERVATLMVGHHSPRFNVPVSENVFNKLGAMVDKMLSMSHLNPWVGVLADTSGDILAKDGTDGVIQAIRAIKADVVFVLGAERLYAAIKSTFESTPT-EAVLLAKSGGVVSRDEETRQSLRSAAIKAYFYGADNRLSPFSTALEFDKVTVLRIGGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDVFDKPLYGFLHVVKVDVERNTMTVLAPSPGNVPGDILLAGDTTWVE 462
            F L    ELRFE+    A+AS+ LQ  SG AE+FG+ LAQN+ Y   +A   A FTW G  + L     V +Y   +TPM  Y+NAHSVLQSKR +A+   + GPR IVVGP  CGKT+L  IL AY ++ N +A   + D S G  +GT P +I    V H+D+E G L  ER      GH  P  N      +++ LGA +D +          G +A+     + K G D +  AI A++ D V V+ AERLYA++   F++    + V + KSGGVV+R++   +  R+  IK YFYG +N L PF+  L FD+  VLR+G ++   PDS LP G  S+L+PL+   ++  A ++H+VL VSQATDE DV  KP++GF HV KVDV +  MTVLAPSPG +PG  L+ G   W+E
Sbjct:   10 FELEEGEELRFEVG---ASASVELQVTSGYAEVFGVELAQNRRYVFRNA-KLALFTWKGCSVTLTGGTEV-SYKVAETPMAIYVNAHSVLQSKRKLAKELKMKGPRCIVVGPSSCGKTSLSAILLAYMLKENHSAFFVEADYSEG-VLGT-PGSIGACAVEHIDVEQGPLF-ERPICFYYGHLDPSENTECLMQLYSVLGASIDALFGQHDELERRGFVANGPATTIEK-GFDVLKHAITALRIDTVLVMDAERLYASLVREFKTDKNVQCVHVPKSGGVVTREDAFIRKFRNDRIKRYFYGPENELHPFTCVLGFDQFKVLRVG-DSYQTPDSALPIGVVSTLNPLELEAVSPSATLIHSVLGVSQATDEADVMSKPVFGFCHVTKVDVPKRQMTVLAPSPGKLPGFFLVLGGVKWLE 418          
BLAST of Gvermi5834.t1 vs. uniprot
Match: M2X9Y8_GALSU (Protein CLP1 homolog n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X9Y8_GALSU)

HSP 1 Score: 285 bits (728), Expect = 2.400e-88
Identity = 166/426 (38.97%), Postives = 251/426 (58.92%), Query Frame = 0
Query:   40 NDYEPRMFTLPSEHELRFEIPPDVATASLSLQSGSAELFGLALAQNKPYHLPSALNAAAFTWHGAQLALRAPPHVMAYTATDTPMPSYINAHSVLQSKRVIARRAGIPGPRAIVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATIALSLVSHLDLEAGNLVHERVATLMVGHHSPRFNVPVSENVFNKLGAMVDKMLSMSHLN-PWVGVLADTSGDILAKDGT--DGVIQAIRAIKADVVFVLGAERLYAAIKSTFESTPTEAVLLAKSGGVVSRDEETRQSLRSAAIKAYFYGADNRLSPFSTALEFDKVTVLRIGGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDVFDKPLYGFLHVVKVDVERNTMTVLAPSPGNVPGDILLAGDTTWVE 462
            N  E R F L  E ELRFE+  +     L+LQSG+AE+FG+ L + KP  L      A FTW G +L L+     + Y A +TPM  Y+ AH +L S R  AR+ G  GP+ ++VGP D GK++L  IL+ Y ++  +  + A +D   G    ++P  I  S V H  +E G ++ E       GH     N  + E + + L  ++D  L  S ++   +G +AD+ G +   DG+  D + Q ++ IKA+V+ VLG+ERLYA I+    S   + + L KSGGVV RD+  R+ L+   ++ YFYG+D  L+PF+T + FD+V ++R+G     VP + LP GA S+LDPL+  ++T   ++LH +L VSQA +E+ + D P+YGF+HV KVD+ + T+++LAPSPG +PG  L+ G   W+E
Sbjct:    3 NQDEKRTFRLEKEQELRFEVSNE-NKVYLTLQSGTAEVFGIELPKKKPVELCDT-KLAVFTWQGCELQLQGITD-LEYVANETPMHLYLKAHYLLDSMRRKARQQGTKGPKVVIVGPQDSGKSSLCQILSCYAMKGGKKILYASIDFQQGSF--SIPGAIGASSVEHATIEDG-MIFENNLVYFYGHTVASENPRLLEKLVSNLSNLLDAKLEDSEMDLGHMGFIADSFGSL---DGSNYDVLKQVLKEIKANVIIVLGSERLYADIQRDLCSEQRQIIQLPKSGGVVGRDQYLRRRLQEMQLRCYFYGSDGNLNPFTTVVTFDQVHIVRVG-IGLHVPATALPLGAQSTLDPLQISQVTPSTELLHCMLGVSQAEEEEQIVDSPVYGFVHVAKVDISKRTISLLAPSPGKLPGSFLVMGSIRWLE 418          
BLAST of Gvermi5834.t1 vs. uniprot
Match: A0A0K9RZ69_SPIOL (Protein CLP1 homolog n=6 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9RZ69_SPIOL)

HSP 1 Score: 241 bits (615), Expect = 2.170e-71
Identity = 157/424 (37.03%), Postives = 223/424 (52.59%), Query Frame = 0
Query:   45 RMFTLPSEHELRFEIPPDVATASLSLQSGSAELFGLALAQNKPYHLPSALNAAAFTWHGAQLALRAPPHVMAYTATDTPMPSYINAHSVLQSKRVIARR-----AGIPGPRAIVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATIALSLVSHLDLEAGNLVHERVATLMVGHHSPRFNVPVSENVFNKLGAMVDKMLSMSHLNPWVGVLADTSGDILAKDGTDGVIQAIRAIKADVVFVLGAERLYAAIKSTFES-TPTEAVLLAKSGGVVSRDEETRQSLRSAAIKAYFYGADNRLSPFSTALEFDKVTVLRIGGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDVFDKPLYGFLHVVKVDVERNTMTVLAPSPGNVPGDILLAGDTTWVE 462
            R   L  E ELR E+  + +   L L +G+AE+FG  +      + P  L  A FTWHGA + +        Y A +TPM SYIN H++L+++R  A+      A   GPR IVVGP DCGK+AL  +L ++  +        D+D   G    T+P +IA + +         +  E       GH +P  NV + +    +L   ++K  S +  +   G++ +T G I    G + ++QAI    ADVV VLG E+L + +K   +S T  + V L KSGGVVSR ++ RQ  R   I+ YFYG  N LSP S    F+ ++V RIGG     P S LP GA  + DP + V +    D+LH VLAVS A D +D+    + GF++V  VDV+R  +T LAPS G +P  IL+ G   WVE
Sbjct:    9 RQVKLERECELRIEVGEN-SPLRLRLLNGNAEIFGTEIPPEIWLNFPPRLKFAIFTWHGATIEMDGGSDTSDYIADETPMVSYINVHAILEARRNRAKASSPDDAESQGPRVIVVGPTDCGKSALSRMLLSWAAKQGWKPTFVDLDIGQGSI--TVPGSIAATPIEMPIDPVEGIPLEMPLVYFYGHTTPTANVDLYKLAVKELAQTLEKQFSGNSESRAAGMVINTMGWIEGV-GYELLLQAIDMFNADVVLVLGQEKLCSMLKDVLKSKTKVDVVKLQKSGGVVSRTQKYRQKSRGYRIREYFYGLANDLSPHSNIANFNDLSVYRIGG-GPQAPRSALPIGAEPAADPTRVVPVNISQDLLHGVLAVSFAKDPEDIISSNVAGFIYVTDVDVQRRKLTYLAPSAGELPSKILILGTLAWVE 427          
BLAST of Gvermi5834.t1 vs. uniprot
Match: A0A6P5MCH0_ARADU (Protein CLP1 homolog n=5 Tax=Arachis TaxID=3817 RepID=A0A6P5MCH0_ARADU)

HSP 1 Score: 239 bits (609), Expect = 2.020e-70
Identity = 152/421 (36.10%), Postives = 225/421 (53.44%), Query Frame = 0
Query:   49 LPSEHELRFEIPPDVATASLSLQSGSAELFGLALAQNKPYHLPSALNAAAFTWHGAQLALRAPPHVMAYTATDTPMPSYINAHSVLQSKRVIARRA------GIPGPRAIVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATIALSLVSHLDLEAGNLVHERVATLMVGHHSPRFNVPVSENVFNKLGAMVDKMLSMSHLNPWVGVLADTSGDILAKDGTDGVIQAIRAIKADVVFVLGAERLYAAIKSTFESTP-TEAVLLAKSGGVVSRDEETRQSLRSAAIKAYFYGADNRLSPFSTALEFDKVTVLRIGGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDVFDKPLYGFLHVVKVDVERNTMTVLAPSPGNVPGDILLAGDTTWVE 462
            L  E ELR E+  D A   L L +G+AE+FG  LA     + P  L  A FTW+GA + +        YTA +TPM SY+N H++L+++R  A+ +         GPR IVVGP D GK+ L  +L ++  +        D+D   G    T+P  IA + +         +  E       GH +P  NV + + +  +LG M+++  + +  +   G++ +T G I    G D ++ AIR +KA+VV VLG E+LY+ ++   +  P  + V L +SGGVVSR+ + RQ  RS  I+ YFYG  N LSP S    F  + V RIGG     P S LP GA    DP + V +    D+LH VLAVS A + +++    + GF++V  VD++R  +T LAPS G++P   L+ G  TW+E
Sbjct:   20 LEKESELRIEVGND-APLCLRLLNGNAEIFGTELAPEIWLNFPPRLKFAVFTWYGATIEMEGTTETD-YTADETPMVSYVNVHAILEARRTRAKASPSGDSESSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGSKPTFVDLDIGQGSI--TIPGCIAATPIEMPIDPVEGITLEMPLVYFFGHTTPSNNVELYKVLVKELGGMLERQFAGNAESRASGMVINTMGWIEGV-GYDLLLHAIRTLKANVVLVLGQEKLYSMLRDVLKGEPKVDVVKLQRSGGVVSRNVKVRQKARSFRIREYFYGLLNDLSPHSNIANFSDLCVYRIGG-GPQAPRSALPIGAEPVADPTRVVPVNINRDLLHMVLAVSFAKEPEEIISSNVAGFIYVTDVDIQRKKITYLAPSAGDLPSKFLILGSLTWLE 434          
BLAST of Gvermi5834.t1 vs. uniprot
Match: A0A2I0X933_9ASPA (Protein CLP1 homolog n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X933_9ASPA)

HSP 1 Score: 238 bits (608), Expect = 2.170e-70
Identity = 155/425 (36.47%), Postives = 224/425 (52.71%), Query Frame = 0
Query:   45 RMFTLPSEHELRFEIPPDVATASLSLQSGSAELFGLALAQNKPYHLPSALNAAAFTWHGAQLALRAPPHVMAYTATDTPMPSYINAHSVLQSKRVIARRAGIPGPRAIVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATIALSLVSHLDLEA-GNLVHERVATLMVGHHSPRFNVPVSENVFNKLGAMVDKMLSMSHLNPWVGVLADTSGDILAKDGTDGV-----IQAIRAIKADVVFVLGAERLYAAIKSTFESTP-TEAVLLAKSGGVVSRDEETRQSLRSAAIKAYFYGADNRLSPFSTALEFDKVTVLRIGGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDVFDKPLYGFLHVVKVDVERNTMTVLAPSPGNVPGDILLAGDTTWVE 462
            R F L  E ELR E+ P+ AT  L L +G+AE+FG  L   K   +P+  N A FTW GA + L     V  Y A +TPM SY+N H++L  +R  AR     GPR IVVGP D GK++L  +L  +  + +    + D+D   G    +MP  IA S V  + ++A   +  E       GH S   NV + + +  +L   ++K  S        G++ +T G       TDG+     +QAI    ADVV VLG E+L++ +K   +S P  + V L KS GVV R+++ RQ  RS  I+ YFYG +N LSP+S ++ F  ++V RIGG     P S LP GA    DP + V +    D++H +LA+S A +   +    + GFL+V ++D E   +T LAP P  +P  +L+ G   W E
Sbjct:   13 RQFVLEKESELRVEVGPE-ATLRLRLTAGAAEVFGAELPPEKWITVPAFQNIAIFTWKGATIELDGISEVE-YVADETPMVSYVNVHAILDGRRTRARTGNSQGPRTIVVGPTDSGKSSLCRMLLNWACKRSWKPTLVDLDIGQGSI--SMPGCIAASSVE-MPMDAFWEIPTEMPVVYFYGHTSASANVELYKVLMKELAQTLEKRFSCISEYEVAGMVINTMG------WTDGLGYELLLQAINIFNADVVLVLGQEKLFSMLKDVLKSKPHVDIVKLHKSEGVVLRNQKVRQMSRSYRIREYFYGLNNDLSPYSLSMNFGDISVFRIGGPQA--PRSALPIGAEPLSDPTRAVIVNINYDLVHAILAISYAKESDQILSSNIAGFLYVAEIDFESKRITFLAPCPAELPSKLLVMGTLKWSE 424          
BLAST of Gvermi5834.t1 vs. uniprot
Match: A0A1Y1I0E8_KLENI (Protein CLP1 homolog n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I0E8_KLENI)

HSP 1 Score: 236 bits (603), Expect = 1.990e-69
Identity = 149/434 (34.33%), Postives = 224/434 (51.61%), Query Frame = 0
Query:   45 RMFTLPSEHELRFEIPPDVATASLSLQSGSAELFGLALAQNKPYHLPSALNAAAFTWHGAQLALRAPPHVMAYTATDTPMPSYINAHSVLQSKRVIARRAG----------IPGPRAIVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATIALSLVSHLDLEAGNLVHERVATLMVGHHSPRFNVPVSENVFNKLGAMVDKMLSMSHLNPWVGVLADTSGDILAKDGTDGVIQAIRAIKADVVFVLGAERLYAAIKSTF------ESTPTEAVLLAKSGGVVSRDEETRQSLRSAAIKAYFYGADNRLSPFSTALEFDKVTVLRIGGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDVFDKPLYGFLHVVKVDVERNTMTVLAPSPGNVPGDILLAGDTTWVE 462
            +++ L  E ELR E+P D    ++ L  G AE+FG  +AQ +  H       A FTW+GA + +   P V +Y A +TPM SY+N H+VL+++R  AR A             GPR I+VGP D GK+ L  IL  Y  R      + D+D   G    ++P TIA +LV            E       GH SP  N  +      +L +M+++  + S      G + +  G + +  G + ++ AI   + DVV V+G ERL++ + S F      + +  + V L KSGGVV+R+ + RQ  R++ ++ YFYG    LSP +  + F  V + RIGG     P S LP GA S  DP+K   ++   D+ H VL +S A   + +    + GF++V +VD  + T+T +APSPG +P ++LLAG   WVE
Sbjct:   16 KVYKLEKESELRCEVPWD-GQLTVKLLEGVAEIFGTEIAQGQELHYRGGDKFAVFTWYGATVEITGQPEV-SYVADETPMVSYVNTHAVLEARRQSAREASSVDGGAAGEETQGPRTIIVGPTDSGKSTLCKILLTYAARLGWKPTLVDLDIGQGQI--SIPGTIAATLVDKPVDPIEGYEMESPLVYFYGHVSPSENPDLYRTQVEQLASMLERRFAGSAEYRNAGAVINAMGWVESL-GYELLLHAIETFRIDVVLVIGQERLFSQLSSQFHGRTRPDGSRIDVVKLNKSGGVVNRNPKHRQRTRTSRVREYFYGIAGDLSPHAMTVSFADVQIYRIGG-GPKAPSSALPVGAQSHADPIKVTHVSISKDLTHAVLGISYAASAEQLLSSNVAGFIYVTEVDTMKRTLTYVAPSPGPLPNNLLLAGSLMWVE 443          
BLAST of Gvermi5834.t1 vs. uniprot
Match: A0A8H7PI66_MORIS (mRNA cleavage and polyadenylation factor n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PI66_MORIS)

HSP 1 Score: 236 bits (602), Expect = 2.260e-69
Identity = 162/435 (37.24%), Postives = 239/435 (54.94%), Query Frame = 0
Query:   45 RMFTLPSEHELRFEIPPDVATASLSLQSGSAELFGLALAQNKPYHLPSALNAAAFTWHGAQLALRAPPHVMAYTATDTPMPSYINAHSVLQSKRVIARRAGIPGPRAIVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATI-ALSLVSHLDLEAG-----NLVHERVATLM-----VGHHSPRFNVPVSENVFNKLGAMVDKMLSMSHLNPWVGVLADTSGDILAKDGTDGVIQAIRAIKADVVFVLGAERLYAAIKSTFESTPTEAVL-LAKSGGVVSRDEETRQSLRSAAIKAYFYG-ADNRLSPFSTALEFDKVTVLRIGGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDV----FDKPLYGFLHVVKVDVERNTMTVLAPSPGNVPGDILLAGDTTWVE 462
            R + L  + ELRFE+    ATA++ L +G+AE+FG+ LA    YH  S    A FTWHG  + L     V  YTA +TPM SY+N H  L+  RVIA + G  GPR +++GPHD GKT+L  IL  Y +R  R  V   +D S G    TMP TI A S+ + +D+E G            +T+M      G+ +P  N+P+ + + +KL   V    ++       G + DT+G ++ + G D +  AI     +VV VLG ERLY+ +       P  +V+ +AKSGGVV RD++ R  L+ + I+ YFYG A   LSP+ST   F  V++ R+G E+++ P S LP G    +   + V+I +   +LH++LAV  A DEKD      +  + GF+++  VD  +  +TVL+P+PG +    LL G   W+E
Sbjct:    9 REYNLDPDSELRFEVE-FAATATVKLLNGTAEIFGVELAPGNAYHF-SGKKIAVFTWHGCSIELSGECSVE-YTANETPMDSYLNLHLALEQMRVIASQQGENGPRVLILGPHDVGKTSLCKILLNYALRQGRRPVHVSLDCSEGSF--TMPGTITATSINNIIDVEEGFGSTATTAASMGSTIMPLAYYYGYQNPAENLPLYKLLISKLAQGVKARSAIDDEARVGGQIIDTTG-LIDQVGYDIIQHAIAQFSVNVVVVLGHERLYSDMTRILRDKPEISVVKVAKSGGVVERDQQFRTQLQRSKIQEYFYGTAKYELSPYSTLTNFSDVSIWRVG-ESSLAPTSALPIGMDRQMSETQLVKIDNADILLHSILAVLNA-DEKDTETTALESNVAGFIYISDVDDGKQKLTVLSPAPGKLLKKHLLMGSFKWME 435          
BLAST of Gvermi5834.t1 vs. uniprot
Match: A0A0C9RQW7_9SPER (Protein CLP1 homolog n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0C9RQW7_9SPER)

HSP 1 Score: 233 bits (595), Expect = 2.030e-68
Identity = 151/430 (35.12%), Postives = 225/430 (52.33%), Query Frame = 0
Query:   45 RMFTLPSEHELRFEIPPDVATASLSLQSGSAELFGLALAQNKPYHLPSALNAAAFTWHGAQLALRAPPHVMAYTATDTPMPSYINAHSVLQSKRVIARRA------GIPGPRAIVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAG-----GAVGTMPATIALSLVSHLDLEAGNLVHERVATLMVGHHSPRFNVPVSENVFNKLGAMVDKMLSMSHLNPWVGVLADTSGDILAKDGTDGVIQAIRAIKADVVFVLGAERLYAAIKSTFES-TPTEAVLLAKSGGVVSRDEETRQSLRSAAIKAYFYGADNRLSPFSTALEFDKVTVLRIGGEATVVPDSVLPAGASSSLDPLKPVRITSVADVLHNVLAVSQATDEKDVFDKPLYGFLHVVKVDVERNTMTVLAPSPGNVPGDILLAGDTTWVE 462
            + F L  E ELR E+  D     L L SG+AE+FG  L        P A   A FTW+GA + +     V AY A +TPM SY+N H+VL+ +R  A+ A      G  GPR IVVGP D GK++L  +L ++  R +      D+D   G     GA+   P  + +  V  + LE              GH+ P  N  + + +  +L   +D   S +  +   GV+ +T G +    G + ++ AI    ADVV VLG E+LY+ +K   +  T  + V L +SGGVVSR+ + R  +R    + YFYG  N LSP ++   F+ + + RIGG     P S LP GA  S+DP + V++T  +D++H VLAVS A +   +    + GF+++  VD++R  +T +AP PG +P  +LLAG  TW++
Sbjct:   11 KTFNLSKESELRIEVGMDTPLR-LQLSSGTAEIFGTELPPQYWITFPPAHKFAIFTWNGATVEVDGTAEV-AYVADETPMVSYVNVHAVLERRRARAKEASMSSPSGSEGPRVIVVGPTDSGKSSLSRMLLSWAARLSWKPTFVDLDIGQGSISIPGAIAATPIEMPIDPVEGIPLEMP-------IVYFYGHNQPGINPGLYKVLVKELARTLDVQFSGNAESRAAGVVINTMGWVEGL-GYELLLHAIDTFNADVVLVLGQEKLYSMLKDMLKGKTNIDIVKLHRSGGVVSRNAKYRSRMRVCRTREYFYGITNDLSPHASVANFNDLLIYRIGG-GPQAPRSALPIGAEPSVDPTRAVQVTINSDLMHAVLAVSYAKEPDQLLTSNVAGFIYITDVDMQRKKITYVAPCPGELPSRLLLAGSLTWMD 429          
The following BLAST results are available for this feature:
BLAST of Gvermi5834.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFC3_9FLOR7.950e-26385.65Protein CLP1-like n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QJX8_CHOCR4.230e-17960.48Pre-mRNA cleavage complex II protein Clp1, putativ... [more]
A0A5J4YSA3_PORPP8.950e-9243.20Protein CLP1 homolog n=1 Tax=Porphyridium purpureu... [more]
M2X9Y8_GALSU2.400e-8838.97Protein CLP1 homolog n=1 Tax=Galdieria sulphuraria... [more]
A0A0K9RZ69_SPIOL2.170e-7137.03Protein CLP1 homolog n=6 Tax=Chenopodiaceae TaxID=... [more]
A0A6P5MCH0_ARADU2.020e-7036.10Protein CLP1 homolog n=5 Tax=Arachis TaxID=3817 Re... [more]
A0A2I0X933_9ASPA2.170e-7036.47Protein CLP1 homolog n=1 Tax=Dendrobium catenatum ... [more]
A0A1Y1I0E8_KLENI1.990e-6934.33Protein CLP1 homolog n=1 Tax=Klebsormidium nitens ... [more]
A0A8H7PI66_MORIS2.260e-6937.24mRNA cleavage and polyadenylation factor n=1 Tax=M... [more]
A0A0C9RQW7_9SPER2.030e-6835.12Protein CLP1 homolog n=2 Tax=Araucariaceae TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038238Clp1, C-terminal domain superfamilyGENE3D2.40.30.330coord: 352..462
e-value: 1.9E-28
score: 100.9
IPR032319Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domainPFAMPF16575CLP1_Pcoord: 155..345
e-value: 7.1E-27
score: 94.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 124..350
e-value: 1.5E-42
score: 147.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 148..293
IPR010655Pre-mRNA cleavage complex subunit Clp1, C-terminalPFAMPF06807Clp1coord: 350..462
e-value: 1.2E-26
score: 93.4
IPR038239Clp1, N-terminal beta-sandwich domain superfamilyGENE3D2.60.120.1030Clp1, DNA binding domaincoord: 39..122
e-value: 1.1E-17
score: 65.7
IPR032324Clp1, N-terminal beta-sandwich domainPFAMPF16573CLP1_Ncoord: 48..139
e-value: 1.8E-21
score: 76.2
NoneNo IPR availablePANTHERPTHR12755:SF6POLYRIBONUCLEOTIDE 5'-HYDROXYL-KINASE CLP1coord: 42..462
IPR045116Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3PANTHERPTHR12755CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1Pcoord: 42..462

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1708contigScGOVlb_1708:286203..287591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5834.t1Gvermi5834.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1708 286203..287591 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5834.t1 ID=Gvermi5834.t1|Name=Gvermi5834.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=463bp
LDGRALHPSIAGAFALSSDRLARTLAESVAMALDQSEQPNDYEPRMFTLP
SEHELRFEIPPDVATASLSLQSGSAELFGLALAQNKPYHLPSALNAAAFT
WHGAQLALRAPPHVMAYTATDTPMPSYINAHSVLQSKRVIARRAGIPGPR
AIVVGPHDCGKTALVNILAAYCVRANRTAVVADMDPSAGGAVGTMPATIA
LSLVSHLDLEAGNLVHERVATLMVGHHSPRFNVPVSENVFNKLGAMVDKM
LSMSHLNPWVGVLADTSGDILAKDGTDGVIQAIRAIKADVVFVLGAERLY
AAIKSTFESTPTEAVLLAKSGGVVSRDEETRQSLRSAAIKAYFYGADNRL
SPFSTALEFDKVTVLRIGGEATVVPDSVLPAGASSSLDPLKPVRITSVAD
VLHNVLAVSQATDEKDVFDKPLYGFLHVVKVDVERNTMTVLAPSPGNVPG
DILLAGDTTWVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038238Clp1_C_sf
IPR032319CLP1_P
IPR027417P-loop_NTPase
IPR010655Clp1_C
IPR038239Clp1_N_sf
IPR032324Clp1_N
IPR045116Clp1/Grc3